Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 BX276092.2-201ENST00000417668 665 ntBASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 CDCA4P2-201ENST00000441182 718 ntBASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 AC026185.1-201ENST00000445748 174 ntBASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 AC023632.3-201ENST00000521633 145 ntBASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 TREX1-205ENST00000625293 1783 ntBASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV12-3A0A0B4J271 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 PHGDH-210ENST00000641115 1638 ntBASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRAV12-3A0A0B4J271 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 AL050303.2-201ENST00000619798 666 ntBASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV12-3A0A0B4J271 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV12-3A0A0B4J271 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms