Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.15□□□□□ -0.33e-7■■■■□ 21.6
XRN2Q9H0D6 HMGN1-215ENST00000485550 745 ntTSL 513.05□□□□□ -0.323e-13■■■■□ 21.6
XRN2Q9H0D6 SORBS2-237ENST00000456060 543 ntTSL 413.02□□□□□ -0.336e-7■■■■□ 21.6
XRN2Q9H0D6 SORBS2-234ENST00000451958 594 ntTSL 413.02□□□□□ -0.336e-7■■■■□ 21.6
XRN2Q9H0D6 SORBS2-216ENST00000429056 534 ntTSL 413.02□□□□□ -0.336e-7■■■■□ 21.6
XRN2Q9H0D6 UTP4-202ENST00000352319 1841 ntTSL 5 BASIC12.99□□□□□ -0.336e-7■■■■□ 21.6
XRN2Q9H0D6 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.336e-7■■■■□ 21.6
XRN2Q9H0D6 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.91□□□□□ -0.346e-7■■■■□ 21.6
XRN2Q9H0D6 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.376e-7■■■■□ 21.6
XRN2Q9H0D6 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.378e-10■■■■□ 21.6
XRN2Q9H0D6 CHFR-220ENST00000541817 758 ntTSL 512.62□□□□□ -0.393e-7■■■■□ 21.6
XRN2Q9H0D6 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.46e-7■■■■□ 21.6
XRN2Q9H0D6 CLSTN3-203ENST00000534830 547 ntTSL 412.41□□□□□ -0.426e-7■■■■□ 21.6
XRN2Q9H0D6 EP400-209ENST00000616136 3134 ntTSL 212.38□□□□□ -0.436e-7■■■■□ 21.6
XRN2Q9H0D6 ZNF331-220ENST00000513999 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.446e-7■■■■□ 21.6
XRN2Q9H0D6 PLOD1-201ENST00000196061 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.446e-7■■■■□ 21.6
XRN2Q9H0D6 USP11-206ENST00000469080 3467 ntTSL 1 (best)12.22□□□□□ -0.458e-10■■■■□ 21.6
XRN2Q9H0D6 C15orf39-201ENST00000360639 4517 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.476e-7■■■■□ 21.6
XRN2Q9H0D6 HPS1-204ENST00000361490 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.476e-7■■■■□ 21.6
XRN2Q9H0D6 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.486e-7■■■■□ 21.6
XRN2Q9H0D6 DDX11-225ENST00000543511 571 ntTSL 512.06□□□□□ -0.486e-7■■■■□ 21.6
XRN2Q9H0D6 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.486e-7■■■■□ 21.6
XRN2Q9H0D6 UTP4-207ENST00000566227 747 ntTSL 312.03□□□□□ -0.486e-7■■■■□ 21.6
XRN2Q9H0D6 CHID1-210ENST00000526714 976 ntTSL 511.99□□□□□ -0.496e-7■■■■□ 21.6
XRN2Q9H0D6 DDX11-208ENST00000536265 3603 ntTSL 511.79□□□□□ -0.526e-7■■■■□ 21.6
XRN2Q9H0D6 ZBTB34-201ENST00000319119 6564 ntTSL 1 (best) BASIC11.72□□□□□ -0.536e-7■■■■□ 21.6
XRN2Q9H0D6 LINC00910-202ENST00000586231 2890 ntTSL 2 BASIC11.64□□□□□ -0.558e-10■■■■□ 21.6
XRN2Q9H0D6 CLSTN3-201ENST00000266546 4185 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.556e-7■■■■□ 21.6
XRN2Q9H0D6 HPS1-208ENST00000467246 2791 ntTSL 1 (best)11.58□□□□□ -0.566e-7■■■■□ 21.6
XRN2Q9H0D6 RAP1GAP-205ENST00000374763 3334 ntTSL 1 (best) BASIC11.53□□□□□ -0.563e-7■■■■□ 21.6
XRN2Q9H0D6 GALE-214ENST00000481736 1801 ntTSL 211.44□□□□□ -0.588e-10■■■■□ 21.6
XRN2Q9H0D6 UTP4-216ENST00000569800 552 ntTSL 411.4□□□□□ -0.586e-7■■■■□ 21.6
XRN2Q9H0D6 ATXN10-204ENST00000435026 653 ntTSL 311.4□□□□□ -0.586e-7■■■■□ 21.6
XRN2Q9H0D6 C2-214ENST00000485690 894 ntTSL 511.36□□□□□ -0.596e-7■■■■□ 21.6
XRN2Q9H0D6 EP400-201ENST00000330386 3908 ntTSL 211.34□□□□□ -0.596e-7■■■■□ 21.6
XRN2Q9H0D6 MTSS1-205ENST00000518547 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.616e-7■■■■□ 21.6
XRN2Q9H0D6 BCAT1-201ENST00000261192 9674 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.636e-7■■■■□ 21.6
XRN2Q9H0D6 MTSS1-218ENST00000529463 569 ntTSL 411.03□□□□□ -0.646e-7■■■■□ 21.6
XRN2Q9H0D6 SORBS2-224ENST00000439914 565 ntTSL 511.01□□□□□ -0.656e-7■■■■□ 21.6
XRN2Q9H0D6 CUX1-218ENST00000560541 3176 ntTSL 510.99□□□□□ -0.651e-6■■■■□ 21.6
XRN2Q9H0D6 CLMN-209ENST00000557696 746 ntTSL 210.96□□□□□ -0.658e-10■■■■□ 21.6
XRN2Q9H0D6 CLMN-208ENST00000557215 515 ntTSL 310.96□□□□□ -0.658e-10■■■■□ 21.6
XRN2Q9H0D6 ZMYND11-201ENST00000309776 4228 ntTSL 2 BASIC10.92□□□□□ -0.666e-7■■■■□ 21.6
XRN2Q9H0D6 PPT2-EGFL8-205ENST00000479001 944 ntTSL 510.9□□□□□ -0.666e-7■■■■□ 21.6
XRN2Q9H0D6 OCRL-204ENST00000486673 942 ntTSL 510.88□□□□□ -0.676e-7■■■■□ 21.6
XRN2Q9H0D6 RPL29-206ENST00000481629 880 ntTSL 2 BASIC10.85□□□□□ -0.678e-10■■■■□ 21.6
XRN2Q9H0D6 MGST2-206ENST00000515137 1013 ntTSL 1 (best)10.76□□□□□ -0.698e-10■■■■□ 21.6
XRN2Q9H0D6 CHFR-201ENST00000266880 11133 ntTSL 2 BASIC10.76□□□□□ -0.693e-7■■■■□ 21.6
XRN2Q9H0D6 PICK1-205ENST00000432756 582 ntTSL 510.74□□□□□ -0.696e-7■■■■□ 21.6
XRN2Q9H0D6 CUX1-217ENST00000558836 2965 ntTSL 510.71□□□□□ -0.691e-6■■■■□ 21.6
XRN2Q9H0D6 ZMYND11-207ENST00000397959 4138 ntTSL 2 BASIC10.71□□□□□ -0.76e-7■■■■□ 21.6
XRN2Q9H0D6 USP11-201ENST00000218348 3338 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.758e-10■■■■□ 21.6
XRN2Q9H0D6 GPX4-204ENST00000587648 536 ntTSL 210.36□□□□□ -0.756e-7■■■■□ 21.6
XRN2Q9H0D6 DDX11-213ENST00000539049 3471 ntTSL 510.35□□□□□ -0.756e-7■■■■□ 21.6
XRN2Q9H0D6 MTSS1-202ENST00000378017 4458 ntTSL 1 (best) BASIC10.31□□□□□ -0.766e-7■■■■□ 21.6
XRN2Q9H0D6 BCAT1-206ENST00000539780 1360 ntTSL 2 BASIC10.29□□□□□ -0.766e-7■■■■□ 21.6
XRN2Q9H0D6 C2-215ENST00000486124 2800 ntTSL 510.27□□□□□ -0.776e-7■■■■□ 21.6
XRN2Q9H0D6 EP400-207ENST00000611739 4314 ntTSL 1 (best)10.25□□□□□ -0.776e-7■■■■□ 21.6
XRN2Q9H0D6 USP11-203ENST00000377080 804 ntTSL 210.25□□□□□ -0.778e-10■■■■□ 21.6
XRN2Q9H0D6 DDX11-204ENST00000435753 4182 ntTSL 510.19□□□□□ -0.786e-7■■■■□ 21.6
XRN2Q9H0D6 SOX13-210ENST00000618875 3476 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.816e-7■■■■□ 21.6
XRN2Q9H0D6 MGST2-207ENST00000616265 1278 ntAPPRIS P1 TSL 4 BASIC9.94□□□□□ -0.828e-10■■■■□ 21.6
XRN2Q9H0D6 DDX11-201ENST00000228264 3717 ntTSL 1 (best) BASIC9.9□□□□□ -0.826e-7■■■■□ 21.6
XRN2Q9H0D6 DDX11-229ENST00000545668 3751 ntTSL 1 (best) BASIC9.72□□□□□ -0.856e-7■■■■□ 21.6
XRN2Q9H0D6 PARD6G-AS1-202ENST00000586421 3333 ntTSL 2 BASIC9.7□□□□□ -0.866e-7■■■■□ 21.6
XRN2Q9H0D6 SORBS2-208ENST00000415274 626 ntTSL 49.63□□□□□ -0.876e-7■■■■□ 21.6
XRN2Q9H0D6 SORBS2-226ENST00000444781 611 ntTSL 59.63□□□□□ -0.876e-7■■■■□ 21.6
XRN2Q9H0D6 CLMN-207ENST00000556454 3023 ntTSL 29.58□□□□□ -0.888e-10■■■■□ 21.6
XRN2Q9H0D6 SORBS2-249ENST00000476878 595 ntTSL 39.49□□□□□ -0.896e-7■■■■□ 21.6
XRN2Q9H0D6 UTP4-205ENST00000563299 581 ntTSL 39.36□□□□□ -0.916e-7■■■■□ 21.6
XRN2Q9H0D6 DDX11-202ENST00000350437 3724 ntTSL 1 (best) BASIC9.21□□□□□ -0.936e-7■■■■□ 21.6
XRN2Q9H0D6 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.946e-7■■■■□ 21.6
XRN2Q9H0D6 AC068946.1-201ENST00000498327 4222 ntTSL 29.1□□□□□ -0.955e-6■■■■□ 21.6
XRN2Q9H0D6 SORBS2-218ENST00000431902 562 ntTSL 58.95□□□□□ -0.986e-7■■■■□ 21.6
XRN2Q9H0D6 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC8.88□□□□□ -0.996e-7■■■■□ 21.6
XRN2Q9H0D6 MIR22HG-202ENST00000570416 535 ntTSL 38.74□□□□□ -1.018e-8■■■■□ 21.6
XRN2Q9H0D6 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.036e-7■■■■□ 21.6
XRN2Q9H0D6 BCAT1-203ENST00000355164 521 ntTSL 28.46□□□□□ -1.066e-7■■■■□ 21.6
XRN2Q9H0D6 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.076e-7■■■■□ 21.6
XRN2Q9H0D6 RPL29-207ENST00000486565 574 ntTSL 1 (best)8.36□□□□□ -1.078e-10■■■■□ 21.6
XRN2Q9H0D6 EBLN3P-207ENST00000631093 636 ntTSL 38.17□□□□□ -1.11e-11■■■■□ 21.6
XRN2Q9H0D6 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC8.08□□□□□ -1.126e-7■■■■□ 21.6
XRN2Q9H0D6 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC7.93□□□□□ -1.146e-7■■■■□ 21.6
XRN2Q9H0D6 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.141e-37■■■■□ 21.6
XRN2Q9H0D6 SORBS2-215ENST00000428330 525 ntTSL 47.66□□□□□ -1.186e-7■■■■□ 21.6
XRN2Q9H0D6 SORBS2-246ENST00000469627 1575 ntTSL 1 (best)7.47□□□□□ -1.216e-7■■■■□ 21.6
XRN2Q9H0D6 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.37□□□□□ -1.236e-7■■■■□ 21.6
XRN2Q9H0D6 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.241e-37■■■■□ 21.6
XRN2Q9H0D6 SORBS2-241ENST00000462661 4964 ntTSL 27.28□□□□□ -1.246e-7■■■■□ 21.6
XRN2Q9H0D6 EIF4E-209ENST00000507665 1143 ntTSL 27.19□□□□□ -1.268e-10■■■■□ 21.6
XRN2Q9H0D6 SORBS2-256ENST00000488562 598 ntTSL 47.15□□□□□ -1.266e-7■■■■□ 21.6
XRN2Q9H0D6 SORBS2-243ENST00000464819 540 ntTSL 47.11□□□□□ -1.276e-7■■■■□ 21.6
XRN2Q9H0D6 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC7.1□□□□□ -1.276e-7■■■■□ 21.6
XRN2Q9H0D6 SORBS2-223ENST00000439049 549 ntTSL 46.75□□□□□ -1.336e-7■■■■□ 21.6
XRN2Q9H0D6 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.378e-10■■■■□ 21.6
XRN2Q9H0D6 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.47□□□□□ -1.378e-10■■■■□ 21.6
XRN2Q9H0D6 ATF1-205ENST00000552510 549 ntTSL 56.37□□□□□ -1.396e-7■■■■□ 21.6
XRN2Q9H0D6 EBLN3P-201ENST00000625218 311 ntTSL 26.36□□□□□ -1.391e-11■■■■□ 21.6
XRN2Q9H0D6 PRPF4B-205ENST00000480058 6775 ntTSL 1 (best)6.2□□□□□ -1.426e-7■■■■□ 21.6
XRN2Q9H0D6 MTSS1-212ENST00000522162 553 ntTSL 46.11□□□□□ -1.436e-7■■■■□ 21.6
Retrieved 100 of 21,068 protein–RNA pairs in 83.4 ms