RNA–Protein interactions for RNA: ENST00000618875.4

SOX13-210, Transcript of SRY-box 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX13, Length 3,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX13-210ENST00000618875 NISCHQ9Y2I1 1504 aa21.68■■□□□ 1.06
SOX13-210ENST00000618875 CCDC180Q9P1Z9 1646 aa18.71■□□□□ 0.59
SOX13-210ENST00000618875 ZCCHC6Q5VYS8 1495 aaKnown RBP18.29■□□□□ 0.52
SOX13-210ENST00000618875 SHROOM4Q9ULL8 1493 aa17.99■□□□□ 0.47
SOX13-210ENST00000618875 DCAF1Q9Y4B6 1507 aa17.84■□□□□ 0.45
SOX13-210ENST00000618875 DCAF8L2P0C7V8 631 aa17.75■□□□□ 0.43
SOX13-210ENST00000618875 PPARGC1BQ86YN6 1023 aaKnown RBP17.55■□□□□ 0.4
SOX13-210ENST00000618875 ABCC9O60706 1549 aa17.52■□□□□ 0.4
SOX13-210ENST00000618875 PCGF6Q9BYE7 350 aa17.52■□□□□ 0.4
SOX13-210ENST00000618875 MYO15BQ96JP2 1530 aa17.49■□□□□ 0.39
SOX13-210ENST00000618875 HRCP23327 699 aa17.48■□□□□ 0.39
SOX13-210ENST00000618875 SUPT5HO00267 1087 aaKnown RBP17.46■□□□□ 0.39
SOX13-210ENST00000618875 SCRIBQ14160 1630 aa17.37■□□□□ 0.37
SOX13-210ENST00000618875 NACADO15069 1562 aa17.31■□□□□ 0.36
SOX13-210ENST00000618875 PELP1Q8IZL8 1130 aaKnown RBP17.17■□□□□ 0.34
SOX13-210ENST00000618875 RB1CC1Q8TDY2 1594 aa17.1■□□□□ 0.33
SOX13-210ENST00000618875 UNC13AQ9UPW8 1703 aa17.03■□□□□ 0.32
SOX13-210ENST00000618875 RSF1Q96T23 1441 aaPredicted RBP16.97■□□□□ 0.31
SOX13-210ENST00000618875 CECR2Q9BXF3 1484 aa16.93■□□□□ 0.3
SOX13-210ENST00000618875 MROH2BQ7Z745 1585 aa16.84■□□□□ 0.29
SOX13-210ENST00000618875 CHIC1Q5VXU3 224 aa16.8■□□□□ 0.28
SOX13-210ENST00000618875 BICRAQ9NZM4 1560 aa16.78■□□□□ 0.28
SOX13-210ENST00000618875 SCAF1Q9H7N4 1312 aaKnown RBP16.77■□□□□ 0.28
SOX13-210ENST00000618875 WIZO95785 1651 aa16.75■□□□□ 0.27
SOX13-210ENST00000618875 LOC105371045A0A1W2PR82 267 aa16.68■□□□□ 0.26
SOX13-210ENST00000618875 EHMT2Q96KQ7 1210 aa16.68■□□□□ 0.26
SOX13-210ENST00000618875 BAZ1AQ9NRL2 1556 aaPredicted RBP16.65■□□□□ 0.26
SOX13-210ENST00000618875 SMARCA4P51532 1647 aa16.63■□□□□ 0.25
SOX13-210ENST00000618875 PABPN1Q86U42 306 aaKnown RBP eCLIP16.6■□□□□ 0.25
SOX13-210ENST00000618875 MYT1Q01538 1121 aa16.51■□□□□ 0.23
SOX13-210ENST00000618875 TRIM26Q12899 539 aaPredicted RBP16.47■□□□□ 0.23
SOX13-210ENST00000618875 EIF4G1Q04637 1599 aaKnown RBP16.46■□□□□ 0.23
SOX13-210ENST00000618875 TOP2AP11388 1531 aaKnown RBP16.46■□□□□ 0.23
SOX13-210ENST00000618875 GTF3C3Q9Y5Q9 886 aa16.43■□□□□ 0.22
SOX13-210ENST00000618875 SMARCA2P51531 1590 aa16.39■□□□□ 0.21
SOX13-210ENST00000618875 PEG3Q9GZU2 1588 aa16.38■□□□□ 0.21
SOX13-210ENST00000618875 YTHDC1Q96MU7 727 aaKnown RBP16.36■□□□□ 0.21
SOX13-210ENST00000618875 ZEB1P37275 1124 aaPredicted RBP16.35■□□□□ 0.21
SOX13-210ENST00000618875 CCDC88BA6NC98 1476 aa16.35■□□□□ 0.21
SOX13-210ENST00000618875 NEUROD1Q13562 356 aa16.35■□□□□ 0.21
SOX13-210ENST00000618875 FAM9AQ8IZU1 332 aaPredicted RBP16.35■□□□□ 0.21
SOX13-210ENST00000618875 CENPBP07199 599 aaPredicted RBP16.3■□□□□ 0.2
SOX13-210ENST00000618875 ACIN1Q9UKV3 1341 aaKnown RBP16.29■□□□□ 0.2
SOX13-210ENST00000618875 ATAD2BQ9ULI0 1458 aa16.25■□□□□ 0.19
SOX13-210ENST00000618875 TTBK1Q5TCY1 1321 aaPredicted RBP16.24■□□□□ 0.19
SOX13-210ENST00000618875 TRIM41Q8WV44 630 aa16.21■□□□□ 0.18
SOX13-210ENST00000618875 ABCC8Q09428 1581 aa16.18■□□□□ 0.18
SOX13-210ENST00000618875 CCER1Q8TC90 406 aaPredicted RBP16.18■□□□□ 0.18
SOX13-210ENST00000618875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.14■□□□□ 0.17
SOX13-210ENST00000618875 BAZ1BQ9UIG0 1483 aaKnown RBP16.13■□□□□ 0.17
SOX13-210ENST00000618875 DIEXFQ68CQ4 756 aaKnown RBP16.08■□□□□ 0.16
SOX13-210ENST00000618875 HMGXB3Q12766 1538 aa16.02■□□□□ 0.15
SOX13-210ENST00000618875 NCAPD3P42695 1498 aa16.02■□□□□ 0.15
SOX13-210ENST00000618875 SYNJ1O43426 1573 aa15.94■□□□□ 0.14
SOX13-210ENST00000618875 SOGA1O94964 1423 aa15.9■□□□□ 0.14
SOX13-210ENST00000618875 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
SOX13-210ENST00000618875 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.13
SOX13-210ENST00000618875 CC2D2AQ9P2K1 1620 aa15.87■□□□□ 0.13
SOX13-210ENST00000618875 CFTRP13569 1480 aa15.78■□□□□ 0.12
SOX13-210ENST00000618875 TOP2BQ02880 1626 aa15.77■□□□□ 0.12
SOX13-210ENST00000618875 BIVM-ERCC5R4GMW8 1640 aa15.76■□□□□ 0.11
SOX13-210ENST00000618875 PRDM2Q13029 1718 aa15.75■□□□□ 0.11
SOX13-210ENST00000618875 BCL11AQ9H165 835 aa15.72■□□□□ 0.11
SOX13-210ENST00000618875 CUX1P39880 1505 aa15.71■□□□□ 0.11
SOX13-210ENST00000618875 EEA1Q15075 1411 aa15.69■□□□□ 0.1
SOX13-210ENST00000618875 CSRNP3Q8WYN3 585 aa15.66■□□□□ 0.1
SOX13-210ENST00000618875 CADPSQ9ULU8 1353 aa15.62■□□□□ 0.09
SOX13-210ENST00000618875 BCANQ96GW7 911 aa15.61■□□□□ 0.09
SOX13-210ENST00000618875 KIF21BO75037 1637 aa15.61■□□□□ 0.09
SOX13-210ENST00000618875 MIER1Q8N108 512 aa15.61■□□□□ 0.09
SOX13-210ENST00000618875 CEP162Q5TB80 1403 aa15.59■□□□□ 0.09
SOX13-210ENST00000618875 TNIKQ9UKE5 1360 aa15.59■□□□□ 0.09
SOX13-210ENST00000618875 DNAJC5BQ9UF47 199 aa15.58■□□□□ 0.09
SOX13-210ENST00000618875 GOLGA3Q08378 1498 aa15.57■□□□□ 0.08
SOX13-210ENST00000618875 ZNF316A6NFI3 1004 aaPredicted RBP15.56■□□□□ 0.08
SOX13-210ENST00000618875 NESP48681 1621 aa15.55■□□□□ 0.08
SOX13-210ENST00000618875 RAPGEF2Q9Y4G8 1499 aa15.54■□□□□ 0.08
SOX13-210ENST00000618875 CEP164Q9UPV0 1460 aa15.53■□□□□ 0.08
SOX13-210ENST00000618875 ANP32EQ9BTT0 268 aa15.49■□□□□ 0.07
SOX13-210ENST00000618875 FANCD2Q9BXW9 1451 aa15.48■□□□□ 0.07
SOX13-210ENST00000618875 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
SOX13-210ENST00000618875 PRXQ9BXM0 1461 aa15.47■□□□□ 0.07
SOX13-210ENST00000618875 UBTFP17480 764 aaKnown RBP15.46■□□□□ 0.07
SOX13-210ENST00000618875 FGD5Q6ZNL6 1462 aa15.44■□□□□ 0.06
SOX13-210ENST00000618875 ERICH3Q5RHP9 1530 aa15.42■□□□□ 0.06
SOX13-210ENST00000618875 LAMC3Q9Y6N6 1575 aa15.41■□□□□ 0.06
SOX13-210ENST00000618875 KIF27Q86VH2 1401 aa15.39■□□□□ 0.05
SOX13-210ENST00000618875 DNMBPQ6XZF7 1577 aa15.39■□□□□ 0.05
SOX13-210ENST00000618875 TOPBP1Q92547 1522 aa15.37■□□□□ 0.05
SOX13-210ENST00000618875 ERICH6Q7L0X2 663 aa15.37■□□□□ 0.05
SOX13-210ENST00000618875 CUX2O14529 1486 aa15.36■□□□□ 0.05
SOX13-210ENST00000618875 RANGAP1P46060 587 aaPredicted RBP15.36■□□□□ 0.05
SOX13-210ENST00000618875 KIF21AQ7Z4S6 1674 aa15.36■□□□□ 0.05
SOX13-210ENST00000618875 CLIP1P30622 1438 aa15.35■□□□□ 0.05
SOX13-210ENST00000618875 URB2Q14146 1524 aaKnown RBP15.35■□□□□ 0.05
SOX13-210ENST00000618875 SUPT16HQ9Y5B9 1047 aaKnown RBP15.34■□□□□ 0.05
SOX13-210ENST00000618875 POLA1P09884 1462 aaPredicted RBP15.34■□□□□ 0.05
SOX13-210ENST00000618875 RAD54L2Q9Y4B4 1467 aa15.33■□□□□ 0.05
SOX13-210ENST00000618875 IGF1RP08069 1367 aa15.33■□□□□ 0.04
SOX13-210ENST00000618875 TSHZ2Q9NRE2 1034 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms