RNA–Protein interactions for RNA: ENST00000552510.5

ATF1-205, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-205ENST00000552510 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
ATF1-205ENST00000552510 CHIC1Q5VXU3 224 aa18.12■□□□□ 0.49
ATF1-205ENST00000552510 PHF23Q9BUL5 403 aaPredicted RBP16.02■□□□□ 0.16
ATF1-205ENST00000552510 SENP3Q9H4L4 574 aaPredicted RBP15.35■□□□□ 0.05
ATF1-205ENST00000552510 PLPPR3Q6T4P5 718 aa14.86□□□□□ -0.03
ATF1-205ENST00000552510 FOXD1Q16676 465 aa14.25□□□□□ -0.13
ATF1-205ENST00000552510 ADRA2BP18089 450 aa14.04□□□□□ -0.16
ATF1-205ENST00000552510 PPP6R1Q9UPN7 881 aa14.03□□□□□ -0.16
ATF1-205ENST00000552510 PIAS4Q8N2W9 510 aaPredicted RBP13.5□□□□□ -0.25
ATF1-205ENST00000552510 KCNA4P22459 653 aa13.29□□□□□ -0.28
ATF1-205ENST00000552510 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
ATF1-205ENST00000552510 MSH5O43196 834 aa12.94□□□□□ -0.34
ATF1-205ENST00000552510 NCBP3Q53F19 620 aaKnown RBP12.91□□□□□ -0.34
ATF1-205ENST00000552510 SCAF1Q9H7N4 1312 aaKnown RBP12.79□□□□□ -0.36
ATF1-205ENST00000552510 EHMT2Q96KQ7 1210 aa12.78□□□□□ -0.36
ATF1-205ENST00000552510 DNAJC5BQ9UF47 199 aa12.75□□□□□ -0.37
ATF1-205ENST00000552510 NPM3O75607 178 aaKnown RBP12.74□□□□□ -0.37
ATF1-205ENST00000552510 CNKSR2Q8WXI2 1034 aa12.71□□□□□ -0.37
ATF1-205ENST00000552510 SLC4A1APQ9BWU0 796 aaKnown RBP12.71□□□□□ -0.37
ATF1-205ENST00000552510 ABCC9O60706 1549 aa12.67□□□□□ -0.38
ATF1-205ENST00000552510 MAPK8IP2Q13387 824 aaPredicted RBP12.65□□□□□ -0.38
ATF1-205ENST00000552510 CSRNP3Q8WYN3 585 aa12.48□□□□□ -0.41
ATF1-205ENST00000552510 NISCHQ9Y2I1 1504 aa12.46□□□□□ -0.42
ATF1-205ENST00000552510 RNF216Q9NWF9 866 aaPredicted RBP12.36□□□□□ -0.43
ATF1-205ENST00000552510 DNAJC5Q9H3Z4 198 aa12.35□□□□□ -0.43
ATF1-205ENST00000552510 DMRT2Q9Y5R5 561 aa12.33□□□□□ -0.44
ATF1-205ENST00000552510 ZBTB22O15209 634 aa12.24□□□□□ -0.45
ATF1-205ENST00000552510 HOXD11P31277 338 aaPredicted RBP12.22□□□□□ -0.45
ATF1-205ENST00000552510 FOXD4L1Q9NU39 408 aa12.09□□□□□ -0.47
ATF1-205ENST00000552510 SLC4A2P04920 1241 aa11.96□□□□□ -0.49
ATF1-205ENST00000552510 DCAF8L1A6NGE4 600 aa11.8□□□□□ -0.52
ATF1-205ENST00000552510 MYCNP04198 464 aaPredicted RBP11.73□□□□□ -0.53
ATF1-205ENST00000552510 PABPN1Q86U42 306 aaKnown RBP eCLIP11.66□□□□□ -0.54
ATF1-205ENST00000552510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.66□□□□□ -0.54
ATF1-205ENST00000552510 ATXN8OSP0DMR3 200 aa11.63□□□□□ -0.55
ATF1-205ENST00000552510 CCDC180Q9P1Z9 1646 aa11.58□□□□□ -0.56
ATF1-205ENST00000552510 TRIM41Q8WV44 630 aa11.54□□□□□ -0.56
ATF1-205ENST00000552510 RB1CC1Q8TDY2 1594 aa11.53□□□□□ -0.56
ATF1-205ENST00000552510 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
ATF1-205ENST00000552510 CECR2Q9BXF3 1484 aa11.48□□□□□ -0.57
ATF1-205ENST00000552510 ATF5Q9Y2D1 282 aaPredicted RBP11.46□□□□□ -0.57
ATF1-205ENST00000552510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.44□□□□□ -0.58
ATF1-205ENST00000552510 HNRNPUL2Q1KMD3 747 aaKnown RBP11.44□□□□□ -0.58
ATF1-205ENST00000552510 SAMD1Q6SPF0 538 aaPredicted RBP11.43□□□□□ -0.58
ATF1-205ENST00000552510 CC2D2AQ9P2K1 1620 aa11.35□□□□□ -0.59
ATF1-205ENST00000552510 UNC13AQ9UPW8 1703 aa11.31□□□□□ -0.6
ATF1-205ENST00000552510 BICRAQ9NZM4 1560 aa11.26□□□□□ -0.61
ATF1-205ENST00000552510 FKBP8Q14318 412 aa11.24□□□□□ -0.61
ATF1-205ENST00000552510 APLP2Q06481 763 aa11.23□□□□□ -0.61
ATF1-205ENST00000552510 CUX2O14529 1486 aa11.23□□□□□ -0.61
ATF1-205ENST00000552510 ZNF219Q9P2Y4 722 aaPredicted RBP11.21□□□□□ -0.61
ATF1-205ENST00000552510 POTEDQ86YR6 584 aa11.18□□□□□ -0.62
ATF1-205ENST00000552510 NACADO15069 1562 aa11.17□□□□□ -0.62
ATF1-205ENST00000552510 RNF39Q9H2S5 420 aa11.15□□□□□ -0.62
ATF1-205ENST00000552510 SPINK5Q9NQ38 1064 aaPredicted RBP11.1□□□□□ -0.63
ATF1-205ENST00000552510 EIF4G1Q04637 1599 aaKnown RBP11.07□□□□□ -0.64
ATF1-205ENST00000552510 TRHP20396 242 aaPredicted RBP11.07□□□□□ -0.64
ATF1-205ENST00000552510 DCAF8L2P0C7V8 631 aa11.06□□□□□ -0.64
ATF1-205ENST00000552510 C1QBPQ07021 282 aaKnown RBP11.03□□□□□ -0.64
ATF1-205ENST00000552510 CAPN15O75808 1086 aa11.02□□□□□ -0.65
ATF1-205ENST00000552510 ERCC6Q03468 1493 aa11□□□□□ -0.65
ATF1-205ENST00000552510 POLA2Q14181 598 aa10.99□□□□□ -0.65
ATF1-205ENST00000552510 MKRN4PQ13434 485 aaPredicted RBP10.96□□□□□ -0.65
ATF1-205ENST00000552510 FBLN2P98095 1184 aa10.9□□□□□ -0.66
ATF1-205ENST00000552510 SHROOM4Q9ULL8 1493 aa10.89□□□□□ -0.67
ATF1-205ENST00000552510 SPDYE4A6NLX3 237 aa10.88□□□□□ -0.67
ATF1-205ENST00000552510 RTN4Q9NQC3 1192 aaKnown RBP10.88□□□□□ -0.67
ATF1-205ENST00000552510 ABCB7O75027 752 aa10.86□□□□□ -0.67
ATF1-205ENST00000552510 AMER1Q5JTC6 1135 aaPredicted RBP10.85□□□□□ -0.67
ATF1-205ENST00000552510 ILDR1Q86SU0 546 aaPredicted RBP10.84□□□□□ -0.67
ATF1-205ENST00000552510 DSG3P32926 999 aa10.75□□□□□ -0.69
ATF1-205ENST00000552510 ZBTB12Q9Y330 459 aaPredicted RBP10.75□□□□□ -0.69
ATF1-205ENST00000552510 PROM2Q8N271 834 aa10.72□□□□□ -0.69
ATF1-205ENST00000552510 FBXO3Q9UK99 471 aa10.72□□□□□ -0.69
ATF1-205ENST00000552510 THOC2Q8NI27 1593 aaKnown RBP10.66□□□□□ -0.7
ATF1-205ENST00000552510 SCRIBQ14160 1630 aa10.63□□□□□ -0.71
ATF1-205ENST00000552510 MYO15BQ96JP2 1530 aa10.62□□□□□ -0.71
ATF1-205ENST00000552510 NESP48681 1621 aa10.62□□□□□ -0.71
ATF1-205ENST00000552510 CACNB1Q02641 598 aaPredicted RBP10.61□□□□□ -0.71
ATF1-205ENST00000552510 RIMBP3CA6NJZ7 1639 aa10.6□□□□□ -0.71
ATF1-205ENST00000552510 RIMBP3BA6NNM3 1639 aa10.6□□□□□ -0.71
ATF1-205ENST00000552510 RIMBP3Q9UFD9 1639 aa10.6□□□□□ -0.71
ATF1-205ENST00000552510 BAZ1AQ9NRL2 1556 aaPredicted RBP10.59□□□□□ -0.71
ATF1-205ENST00000552510 ZNF692Q9BU19 519 aaPredicted RBP10.58□□□□□ -0.72
ATF1-205ENST00000552510 SMARCA2P51531 1590 aa10.56□□□□□ -0.72
ATF1-205ENST00000552510 VASPP50552 380 aaPredicted RBP10.56□□□□□ -0.72
ATF1-205ENST00000552510 OSCARQ8IYS5 282 aa10.56□□□□□ -0.72
ATF1-205ENST00000552510 SPDYE2BA6NHP3 402 aa10.52□□□□□ -0.73
ATF1-205ENST00000552510 SPDYE6P0CI01 402 aa10.52□□□□□ -0.73
ATF1-205ENST00000552510 SPDYE2Q495Y8 402 aa10.52□□□□□ -0.73
ATF1-205ENST00000552510 IFNLR1Q8IU57 520 aaPredicted RBP10.48□□□□□ -0.73
ATF1-205ENST00000552510 SSUH2Q9Y2M2 353 aa10.48□□□□□ -0.73
ATF1-205ENST00000552510 ARHGEF11O15085 1522 aa10.45□□□□□ -0.74
ATF1-205ENST00000552510 CYB5RLQ6IPT4 315 aa10.44□□□□□ -0.74
ATF1-205ENST00000552510 KIF21AQ7Z4S6 1674 aa10.42□□□□□ -0.74
ATF1-205ENST00000552510 STAG3Q9UJ98 1225 aa10.4□□□□□ -0.74
ATF1-205ENST00000552510 SLC24A1O60721 1099 aa10.39□□□□□ -0.75
ATF1-205ENST00000552510 KLHL34Q8N239 644 aa10.33□□□□□ -0.76
ATF1-205ENST00000552510 NCAPD3P42695 1498 aa10.32□□□□□ -0.76
ATF1-205ENST00000552510 MIER1Q8N108 512 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms