RNA–Protein interactions for RNA: ENST00000543511.1

DDX11-225, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-225ENST00000543511 CHIC1Q5VXU3 224 aa27.16■■□□□ 1.94
DDX11-225ENST00000543511 AEBP2Q6ZN18 517 aaPredicted RBP27.08■■□□□ 1.93
DDX11-225ENST00000543511 NISCHQ9Y2I1 1504 aa25.43■■□□□ 1.66
DDX11-225ENST00000543511 PHF23Q9BUL5 403 aaPredicted RBP24.01■■□□□ 1.43
DDX11-225ENST00000543511 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
DDX11-225ENST00000543511 CCDC180Q9P1Z9 1646 aa22.58■■□□□ 1.21
DDX11-225ENST00000543511 PLPPR3Q6T4P5 718 aa22.37■■□□□ 1.17
DDX11-225ENST00000543511 ABCC9O60706 1549 aa21.78■■□□□ 1.08
DDX11-225ENST00000543511 ZCCHC6Q5VYS8 1495 aaKnown RBP21.26■□□□□ 0.99
DDX11-225ENST00000543511 NACADO15069 1562 aa21.11■□□□□ 0.97
DDX11-225ENST00000543511 FOXD1Q16676 465 aa21.11■□□□□ 0.97
DDX11-225ENST00000543511 MYO15BQ96JP2 1530 aa21.09■□□□□ 0.97
DDX11-225ENST00000543511 DCAF1Q9Y4B6 1507 aa21.08■□□□□ 0.96
DDX11-225ENST00000543511 RB1CC1Q8TDY2 1594 aa21.07■□□□□ 0.96
DDX11-225ENST00000543511 ADRA2BP18089 450 aa20.99■□□□□ 0.95
DDX11-225ENST00000543511 DCAF8L2P0C7V8 631 aa20.97■□□□□ 0.95
DDX11-225ENST00000543511 PPP6R1Q9UPN7 881 aa20.94■□□□□ 0.94
DDX11-225ENST00000543511 UNC13AQ9UPW8 1703 aa20.73■□□□□ 0.91
DDX11-225ENST00000543511 SCRIBQ14160 1630 aa20.58■□□□□ 0.89
DDX11-225ENST00000543511 BICRAQ9NZM4 1560 aa20.49■□□□□ 0.87
DDX11-225ENST00000543511 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
DDX11-225ENST00000543511 SHROOM4Q9ULL8 1493 aa20.26■□□□□ 0.83
DDX11-225ENST00000543511 KCNA4P22459 653 aa20.26■□□□□ 0.83
DDX11-225ENST00000543511 PIAS4Q8N2W9 510 aaPredicted RBP20.06■□□□□ 0.8
DDX11-225ENST00000543511 EIF4G1Q04637 1599 aaKnown RBP19.89■□□□□ 0.77
DDX11-225ENST00000543511 PPP4R3CPQ6ZMV5 832 aa19.83■□□□□ 0.77
DDX11-225ENST00000543511 CECR2Q9BXF3 1484 aa19.79■□□□□ 0.76
DDX11-225ENST00000543511 DNAJC5BQ9UF47 199 aa19.76■□□□□ 0.75
DDX11-225ENST00000543511 CC2D2AQ9P2K1 1620 aa19.76■□□□□ 0.75
DDX11-225ENST00000543511 EHMT2Q96KQ7 1210 aa19.73■□□□□ 0.75
DDX11-225ENST00000543511 SMARCA4P51532 1647 aa19.72■□□□□ 0.75
DDX11-225ENST00000543511 BAZ1AQ9NRL2 1556 aaPredicted RBP19.69■□□□□ 0.74
DDX11-225ENST00000543511 MROH2BQ7Z745 1585 aa19.61■□□□□ 0.73
DDX11-225ENST00000543511 PEG3Q9GZU2 1588 aa19.53■□□□□ 0.72
DDX11-225ENST00000543511 ATAD2BQ9ULI0 1458 aa19.51■□□□□ 0.71
DDX11-225ENST00000543511 SMARCA2P51531 1590 aa19.5■□□□□ 0.71
DDX11-225ENST00000543511 NCBP3Q53F19 620 aaKnown RBP19.49■□□□□ 0.71
DDX11-225ENST00000543511 NCAPD3P42695 1498 aa19.46■□□□□ 0.71
DDX11-225ENST00000543511 RSF1Q96T23 1441 aaPredicted RBP19.44■□□□□ 0.7
DDX11-225ENST00000543511 WIZO95785 1651 aa19.43■□□□□ 0.7
DDX11-225ENST00000543511 HMGXB3Q12766 1538 aa19.43■□□□□ 0.7
DDX11-225ENST00000543511 SLC4A1APQ9BWU0 796 aaKnown RBP19.39■□□□□ 0.69
DDX11-225ENST00000543511 BAZ1BQ9UIG0 1483 aaKnown RBP19.35■□□□□ 0.69
DDX11-225ENST00000543511 NPM3O75607 178 aaKnown RBP19.26■□□□□ 0.67
DDX11-225ENST00000543511 TOP2AP11388 1531 aaKnown RBP19.24■□□□□ 0.67
DDX11-225ENST00000543511 CSRNP3Q8WYN3 585 aa19.19■□□□□ 0.66
DDX11-225ENST00000543511 MSH5O43196 834 aa19.11■□□□□ 0.65
DDX11-225ENST00000543511 SCAF1Q9H7N4 1312 aaKnown RBP19.09■□□□□ 0.65
DDX11-225ENST00000543511 CNKSR2Q8WXI2 1034 aa19.09■□□□□ 0.65
DDX11-225ENST00000543511 SUPT5HO00267 1087 aaKnown RBP19.01■□□□□ 0.63
DDX11-225ENST00000543511 CCDC88BA6NC98 1476 aa18.97■□□□□ 0.63
DDX11-225ENST00000543511 NESP48681 1621 aa18.94■□□□□ 0.62
DDX11-225ENST00000543511 LAMC3Q9Y6N6 1575 aa18.93■□□□□ 0.62
DDX11-225ENST00000543511 CADPSQ9ULU8 1353 aa18.87■□□□□ 0.61
DDX11-225ENST00000543511 CFTRP13569 1480 aa18.84■□□□□ 0.61
DDX11-225ENST00000543511 PRDM2Q13029 1718 aa18.84■□□□□ 0.61
DDX11-225ENST00000543511 MAPK8IP2Q13387 824 aaPredicted RBP18.79■□□□□ 0.6
DDX11-225ENST00000543511 KIF21AQ7Z4S6 1674 aa18.79■□□□□ 0.6
DDX11-225ENST00000543511 PDS5BQ9NTI5 1447 aa18.73■□□□□ 0.59
DDX11-225ENST00000543511 ERCC6Q03468 1493 aa18.71■□□□□ 0.59
DDX11-225ENST00000543511 FANCD2Q9BXW9 1451 aa18.68■□□□□ 0.58
DDX11-225ENST00000543511 ZBTB22O15209 634 aa18.67■□□□□ 0.58
DDX11-225ENST00000543511 THOC2Q8NI27 1593 aaKnown RBP18.67■□□□□ 0.58
DDX11-225ENST00000543511 CEP164Q9UPV0 1460 aa18.64■□□□□ 0.57
DDX11-225ENST00000543511 MRC2Q9UBG0 1479 aa18.58■□□□□ 0.56
DDX11-225ENST00000543511 WDR62O43379 1518 aa18.54■□□□□ 0.56
DDX11-225ENST00000543511 RNF216Q9NWF9 866 aaPredicted RBP18.53■□□□□ 0.56
DDX11-225ENST00000543511 URB2Q14146 1524 aaKnown RBP18.52■□□□□ 0.56
DDX11-225ENST00000543511 CUX2O14529 1486 aa18.49■□□□□ 0.55
DDX11-225ENST00000543511 DNMBPQ6XZF7 1577 aa18.45■□□□□ 0.54
DDX11-225ENST00000543511 TOPBP1Q92547 1522 aa18.44■□□□□ 0.54
DDX11-225ENST00000543511 ABCC8Q09428 1581 aa18.4■□□□□ 0.54
DDX11-225ENST00000543511 CUX1P39880 1505 aa18.39■□□□□ 0.54
DDX11-225ENST00000543511 FOXD4L1Q9NU39 408 aa18.39■□□□□ 0.53
DDX11-225ENST00000543511 DMRT2Q9Y5R5 561 aa18.34■□□□□ 0.53
DDX11-225ENST00000543511 BIVM-ERCC5R4GMW8 1640 aa18.33■□□□□ 0.52
DDX11-225ENST00000543511 SYNJ1O43426 1573 aa18.32■□□□□ 0.52
DDX11-225ENST00000543511 WRNQ14191 1432 aaPredicted RBP eCLIP18.32■□□□□ 0.52
DDX11-225ENST00000543511 TOP2BQ02880 1626 aa18.3■□□□□ 0.52
DDX11-225ENST00000543511 POLA1P09884 1462 aaPredicted RBP18.28■□□□□ 0.52
DDX11-225ENST00000543511 FGD5Q6ZNL6 1462 aa18.27■□□□□ 0.52
DDX11-225ENST00000543511 HOXD11P31277 338 aaPredicted RBP18.27■□□□□ 0.52
DDX11-225ENST00000543511 TARBP1Q13395 1621 aaKnown RBP18.25■□□□□ 0.51
DDX11-225ENST00000543511 IFT140Q96RY7 1462 aa18.24■□□□□ 0.51
DDX11-225ENST00000543511 WDR97A6NE52 1622 aa18.21■□□□□ 0.51
DDX11-225ENST00000543511 RAD54L2Q9Y4B4 1467 aa18.19■□□□□ 0.5
DDX11-225ENST00000543511 SOGA1O94964 1423 aa18.15■□□□□ 0.5
DDX11-225ENST00000543511 ZNF608Q9ULD9 1512 aaPredicted RBP18.15■□□□□ 0.5
DDX11-225ENST00000543511 EIF4G3O43432 1585 aaKnown RBP18.13■□□□□ 0.49
DDX11-225ENST00000543511 ABCA10Q8WWZ4 1543 aa18.12■□□□□ 0.49
DDX11-225ENST00000543511 ABCA5Q8WWZ7 1642 aa18.07■□□□□ 0.48
DDX11-225ENST00000543511 AQRO60306 1485 aaKnown RBP eCLIP18.04■□□□□ 0.482e-14■■■■■ 63.4
DDX11-225ENST00000543511 TDRD9Q8NDG6 1382 aaKnown RBP18.03■□□□□ 0.48
DDX11-225ENST00000543511 PBRM1Q86U86 1689 aa18.03■□□□□ 0.48
DDX11-225ENST00000543511 SLC4A2P04920 1241 aa18.02■□□□□ 0.48
DDX11-225ENST00000543511 GAPVD1Q14C86 1478 aa17.98■□□□□ 0.47
DDX11-225ENST00000543511 GRIN2BQ13224 1484 aa17.95■□□□□ 0.46
DDX11-225ENST00000543511 TRIM41Q8WV44 630 aa17.93■□□□□ 0.46
DDX11-225ENST00000543511 SNAPC4Q5SXM2 1469 aa17.92■□□□□ 0.46
DDX11-225ENST00000543511 MAGI1Q96QZ7 1491 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms