RNA–Protein interactions for RNA: ENST00000611739.4

EP400-207, Transcript of E1A binding protein p400, humanhuman

TSL 1 (best)

Gene EP400, Length 4,314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EP400-207ENST00000611739 NISCHQ9Y2I1 1504 aa18.29■□□□□ 0.52
EP400-207ENST00000611739 DCAF8L2P0C7V8 631 aa17.89■□□□□ 0.45
EP400-207ENST00000611739 SUPT5HO00267 1087 aaKnown RBP17.55■□□□□ 0.4
EP400-207ENST00000611739 SHROOM4Q9ULL8 1493 aa17.39■□□□□ 0.37
EP400-207ENST00000611739 EHMT2Q96KQ7 1210 aa16.75■□□□□ 0.27
EP400-207ENST00000611739 PCGF6Q9BYE7 350 aa16.63■□□□□ 0.25
EP400-207ENST00000611739 FAM9AQ8IZU1 332 aaPredicted RBP16.46■□□□□ 0.23
EP400-207ENST00000611739 TTBK1Q5TCY1 1321 aaPredicted RBP16.2■□□□□ 0.18
EP400-207ENST00000611739 TRIM41Q8WV44 630 aa16.16■□□□□ 0.18
EP400-207ENST00000611739 PELP1Q8IZL8 1130 aaKnown RBP16.11■□□□□ 0.17
EP400-207ENST00000611739 CHIC1Q5VXU3 224 aa16.1■□□□□ 0.17
EP400-207ENST00000611739 HRCP23327 699 aa16.06■□□□□ 0.16
EP400-207ENST00000611739 LOC105371045A0A1W2PR82 267 aa16.03■□□□□ 0.16
EP400-207ENST00000611739 ZEB1P37275 1124 aaPredicted RBP15.98■□□□□ 0.15
EP400-207ENST00000611739 APLP2Q06481 763 aa15.97■□□□□ 0.15
EP400-207ENST00000611739 CCER1Q8TC90 406 aaPredicted RBP15.95■□□□□ 0.14
EP400-207ENST00000611739 PPARGC1BQ86YN6 1023 aaKnown RBP15.94■□□□□ 0.14
EP400-207ENST00000611739 TRIM26Q12899 539 aaPredicted RBP15.89■□□□□ 0.13
EP400-207ENST00000611739 RANGAP1P46060 587 aaPredicted RBP15.86■□□□□ 0.13
EP400-207ENST00000611739 MYT1Q01538 1121 aa15.84■□□□□ 0.13
EP400-207ENST00000611739 UBTFP17480 764 aaKnown RBP15.78■□□□□ 0.12
EP400-207ENST00000611739 CENPBP07199 599 aaPredicted RBP15.76■□□□□ 0.11
EP400-207ENST00000611739 YTHDC1Q96MU7 727 aaKnown RBP15.62■□□□□ 0.09
EP400-207ENST00000611739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.49■□□□□ 0.07
EP400-207ENST00000611739 ATP1B4Q9UN42 357 aaPredicted RBP15.47■□□□□ 0.07
EP400-207ENST00000611739 HNRNPUL2Q1KMD3 747 aaKnown RBP15.41■□□□□ 0.06
EP400-207ENST00000611739 ITGAEP38570 1179 aa15.29■□□□□ 0.04
EP400-207ENST00000611739 DIEXFQ68CQ4 756 aaKnown RBP15.29■□□□□ 0.04
EP400-207ENST00000611739 ERICH6Q7L0X2 663 aa15.28■□□□□ 0.04
EP400-207ENST00000611739 ZCCHC6Q5VYS8 1495 aaKnown RBP15.25■□□□□ 0.03
EP400-207ENST00000611739 ABCC9O60706 1549 aa15.21■□□□□ 0.03
EP400-207ENST00000611739 MYO15BQ96JP2 1530 aa15.17■□□□□ 0.02
EP400-207ENST00000611739 NEFLP07196 543 aa15.16■□□□□ 0.02
EP400-207ENST00000611739 PABPN1Q86U42 306 aaKnown RBP eCLIP15.11■□□□□ 0.01
EP400-207ENST00000611739 GTF3C3Q9Y5Q9 886 aa15.09■□□□□ 0.01
EP400-207ENST00000611739 DCAF1Q9Y4B6 1507 aa15.09■□□□□ 0.01
EP400-207ENST00000611739 CSRNP3Q8WYN3 585 aa14.96□□□□□ -0.01
EP400-207ENST00000611739 ACIN1Q9UKV3 1341 aaKnown RBP14.96□□□□□ -0.01
EP400-207ENST00000611739 ZNF316A6NFI3 1004 aaPredicted RBP14.96□□□□□ -0.01
EP400-207ENST00000611739 SCRIBQ14160 1630 aa14.92□□□□□ -0.02
EP400-207ENST00000611739 FAM50AQ14320 339 aaKnown RBP14.88□□□□□ -0.03
EP400-207ENST00000611739 CNGB1Q14028 1251 aaPredicted RBP14.88□□□□□ -0.03
EP400-207ENST00000611739 POLR3GLQ9BT43 218 aa14.86□□□□□ -0.03
EP400-207ENST00000611739 NEUROD1Q13562 356 aa14.85□□□□□ -0.03
EP400-207ENST00000611739 CCDC180Q9P1Z9 1646 aa14.83□□□□□ -0.04
EP400-207ENST00000611739 BCANQ96GW7 911 aa14.8□□□□□ -0.04
EP400-207ENST00000611739 SCAF1Q9H7N4 1312 aaKnown RBP14.8□□□□□ -0.04
EP400-207ENST00000611739 RSF1Q96T23 1441 aaPredicted RBP14.78□□□□□ -0.04
EP400-207ENST00000611739 P3H3Q8IVL6 736 aa14.69□□□□□ -0.06
EP400-207ENST00000611739 TRIM52Q96A61 297 aa14.66□□□□□ -0.06
EP400-207ENST00000611739 ANP32CO43423 234 aa14.62□□□□□ -0.07
EP400-207ENST00000611739 MIER1Q8N108 512 aa14.61□□□□□ -0.07
EP400-207ENST00000611739 CEP162Q5TB80 1403 aa14.54□□□□□ -0.08
EP400-207ENST00000611739 DDX10Q13206 875 aaKnown RBP14.51□□□□□ -0.09
EP400-207ENST00000611739 ARID3CA6NKF2 412 aa14.51□□□□□ -0.09
EP400-207ENST00000611739 ZNF326Q5BKZ1 582 aaKnown RBP14.5□□□□□ -0.09
EP400-207ENST00000611739 CLIP1P30622 1438 aa14.49□□□□□ -0.09
EP400-207ENST00000611739 CECR2Q9BXF3 1484 aa14.48□□□□□ -0.09
EP400-207ENST00000611739 MYT1LQ9UL68 1186 aa14.48□□□□□ -0.09
EP400-207ENST00000611739 FKBP8Q14318 412 aa14.46□□□□□ -0.09
EP400-207ENST00000611739 DAXXQ9UER7 740 aaPredicted RBP14.44□□□□□ -0.1
EP400-207ENST00000611739 RTL5Q5HYW3 569 aaPredicted RBP14.42□□□□□ -0.1
EP400-207ENST00000611739 CDK11AQ9UQ88 783 aaPredicted RBP14.42□□□□□ -0.1
EP400-207ENST00000611739 RB1CC1Q8TDY2 1594 aa14.41□□□□□ -0.1
EP400-207ENST00000611739 HIRIP3Q9BW71 556 aaPredicted RBP14.4□□□□□ -0.1
EP400-207ENST00000611739 TNIKQ9UKE5 1360 aa14.4□□□□□ -0.1
EP400-207ENST00000611739 GOLGA3Q08378 1498 aa14.38□□□□□ -0.11
EP400-207ENST00000611739 EEA1Q15075 1411 aa14.37□□□□□ -0.11
EP400-207ENST00000611739 TONSLQ96HA7 1378 aa14.36□□□□□ -0.11
EP400-207ENST00000611739 WRNQ14191 1432 aaPredicted RBP eCLIP14.36□□□□□ -0.11
EP400-207ENST00000611739 HNRNPUQ00839 825 aaKnown RBP eCLIP14.35□□□□□ -0.11
EP400-207ENST00000611739 CLSPNQ9HAW4 1339 aa14.34□□□□□ -0.11
EP400-207ENST00000611739 SOGA1O94964 1423 aa14.34□□□□□ -0.11
EP400-207ENST00000611739 FBLN2P98095 1184 aa14.33□□□□□ -0.11
EP400-207ENST00000611739 CHIC2Q9UKJ5 165 aa14.3□□□□□ -0.12
EP400-207ENST00000611739 SLC4A1APQ9BWU0 796 aaKnown RBP14.3□□□□□ -0.12
EP400-207ENST00000611739 MROH2BQ7Z745 1585 aa14.29□□□□□ -0.12
EP400-207ENST00000611739 NACADO15069 1562 aa14.28□□□□□ -0.12
EP400-207ENST00000611739 ZNF777Q9ULD5 760 aaPredicted RBP14.28□□□□□ -0.12
EP400-207ENST00000611739 FAM9BQ8IZU0 186 aa14.27□□□□□ -0.13
EP400-207ENST00000611739 CEP164Q9UPV0 1460 aa14.24□□□□□ -0.13
EP400-207ENST00000611739 IRX6P78412 446 aaPredicted RBP14.23□□□□□ -0.13
EP400-207ENST00000611739 BAZ1AQ9NRL2 1556 aaPredicted RBP14.23□□□□□ -0.13
EP400-207ENST00000611739 CCDC88BA6NC98 1476 aa14.22□□□□□ -0.13
EP400-207ENST00000611739 ABCC8Q09428 1581 aa14.2□□□□□ -0.14
EP400-207ENST00000611739 MTUS2Q5JR59 1369 aa14.19□□□□□ -0.14
EP400-207ENST00000611739 SIN3AQ96ST3 1273 aa14.18□□□□□ -0.14
EP400-207ENST00000611739 EIF5BO60841 1220 aaKnown RBP14.16□□□□□ -0.14
EP400-207ENST00000611739 RRP7BPQ9NSQ0 103 aa14.16□□□□□ -0.14
EP400-207ENST00000611739 BAZ1BQ9UIG0 1483 aaKnown RBP14.15□□□□□ -0.15
EP400-207ENST00000611739 MRS2Q9HD23 443 aa14.14□□□□□ -0.15
EP400-207ENST00000611739 SALL2Q9Y467 1007 aaPredicted RBP14.14□□□□□ -0.15
EP400-207ENST00000611739 NPM2Q86SE8 214 aaKnown RBP14.13□□□□□ -0.15
EP400-207ENST00000611739 ANP32AP39687 249 aaKnown RBP14.12□□□□□ -0.15
EP400-207ENST00000611739 KIF27Q86VH2 1401 aa14.11□□□□□ -0.15
EP400-207ENST00000611739 KANK4Q5T7N3 995 aaPredicted RBP14.11□□□□□ -0.15
EP400-207ENST00000611739 SUPT16HQ9Y5B9 1047 aaKnown RBP14.11□□□□□ -0.15
EP400-207ENST00000611739 VPS8Q8N3P4 1428 aa14.08□□□□□ -0.16
EP400-207ENST00000611739 EIF4G2P78344 907 aaKnown RBP eCLIP14.08□□□□□ -0.16
EP400-207ENST00000611739 CCNB3Q8WWL7 1395 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms