RNA–Protein interactions for RNA: ENST00000563299.5

UTP4-205, Transcript of UTP4, small subunit processome component, humanhuman

TSL 3

Gene UTP4, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTP4-205ENST00000563299 CHIC1Q5VXU3 224 aa20.81■□□□□ 0.92
UTP4-205ENST00000563299 AEBP2Q6ZN18 517 aaPredicted RBP20.52■□□□□ 0.88
UTP4-205ENST00000563299 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
UTP4-205ENST00000563299 PHF23Q9BUL5 403 aaPredicted RBP18.35■□□□□ 0.53
UTP4-205ENST00000563299 ABCC9O60706 1549 aa17.39■□□□□ 0.37
UTP4-205ENST00000563299 SENP3Q9H4L4 574 aaPredicted RBP17.35■□□□□ 0.37
UTP4-205ENST00000563299 PLPPR3Q6T4P5 718 aa17.25■□□□□ 0.35
UTP4-205ENST00000563299 CCDC180Q9P1Z9 1646 aa17.21■□□□□ 0.35
UTP4-205ENST00000563299 RB1CC1Q8TDY2 1594 aa16.47■□□□□ 0.23
UTP4-205ENST00000563299 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
UTP4-205ENST00000563299 NACADO15069 1562 aa16.34■□□□□ 0.21
UTP4-205ENST00000563299 DCAF8L2P0C7V8 631 aa16.23■□□□□ 0.19
UTP4-205ENST00000563299 PABPN1Q86U42 306 aaKnown RBP eCLIP16.18■□□□□ 0.18
UTP4-205ENST00000563299 ADRA2BP18089 450 aa16.09■□□□□ 0.17
UTP4-205ENST00000563299 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
UTP4-205ENST00000563299 UNC13AQ9UPW8 1703 aa16.02■□□□□ 0.15
UTP4-205ENST00000563299 BICRAQ9NZM4 1560 aa15.99■□□□□ 0.15
UTP4-205ENST00000563299 FOXD1Q16676 465 aa15.96■□□□□ 0.15
UTP4-205ENST00000563299 PPP6R1Q9UPN7 881 aa15.93■□□□□ 0.14
UTP4-205ENST00000563299 ZCCHC6Q5VYS8 1495 aaKnown RBP15.85■□□□□ 0.13
UTP4-205ENST00000563299 DCAF1Q9Y4B6 1507 aa15.82■□□□□ 0.12
UTP4-205ENST00000563299 SHROOM4Q9ULL8 1493 aa15.8■□□□□ 0.12
UTP4-205ENST00000563299 KCNA4P22459 653 aa15.79■□□□□ 0.12
UTP4-205ENST00000563299 CECR2Q9BXF3 1484 aa15.69■□□□□ 0.1
UTP4-205ENST00000563299 SCRIBQ14160 1630 aa15.68■□□□□ 0.1
UTP4-205ENST00000563299 CC2D2AQ9P2K1 1620 aa15.68■□□□□ 0.1
UTP4-205ENST00000563299 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
UTP4-205ENST00000563299 EIF4G1Q04637 1599 aaKnown RBP15.62■□□□□ 0.09
UTP4-205ENST00000563299 PPP4R3CPQ6ZMV5 832 aa15.28■□□□□ 0.04
UTP4-205ENST00000563299 PIAS4Q8N2W9 510 aaPredicted RBP15.28■□□□□ 0.04
UTP4-205ENST00000563299 DNAJC5Q9H3Z4 198 aa15.21■□□□□ 0.03
UTP4-205ENST00000563299 SLC4A1APQ9BWU0 796 aaKnown RBP15.19■□□□□ 0.02
UTP4-205ENST00000563299 NCBP3Q53F19 620 aaKnown RBP15.13■□□□□ 0.01
UTP4-205ENST00000563299 NCAPD3P42695 1498 aa15.1■□□□□ 0.01
UTP4-205ENST00000563299 CSRNP3Q8WYN3 585 aa15.06■□□□□ 0
UTP4-205ENST00000563299 CUX2O14529 1486 aa15.05■□□□□ -0
UTP4-205ENST00000563299 ERCC6Q03468 1493 aa15.03■□□□□ -0
UTP4-205ENST00000563299 ATAD2BQ9ULI0 1458 aa15.03■□□□□ -0
UTP4-205ENST00000563299 SMARCA2P51531 1590 aa14.97□□□□□ -0.01
UTP4-205ENST00000563299 HMGXB3Q12766 1538 aa14.96□□□□□ -0.02
UTP4-205ENST00000563299 SMARCA4P51532 1647 aa14.95□□□□□ -0.02
UTP4-205ENST00000563299 NESP48681 1621 aa14.89□□□□□ -0.03
UTP4-205ENST00000563299 NPM3O75607 178 aaKnown RBP14.88□□□□□ -0.03
UTP4-205ENST00000563299 BAZ1BQ9UIG0 1483 aaKnown RBP14.88□□□□□ -0.03
UTP4-205ENST00000563299 BAZ1AQ9NRL2 1556 aaPredicted RBP14.87□□□□□ -0.03
UTP4-205ENST00000563299 PEG3Q9GZU2 1588 aa14.82□□□□□ -0.04
UTP4-205ENST00000563299 THOC2Q8NI27 1593 aaKnown RBP14.76□□□□□ -0.05
UTP4-205ENST00000563299 LAMC3Q9Y6N6 1575 aa14.76□□□□□ -0.05
UTP4-205ENST00000563299 MROH2BQ7Z745 1585 aa14.75□□□□□ -0.05
UTP4-205ENST00000563299 PDS5BQ9NTI5 1447 aa14.71□□□□□ -0.05
UTP4-205ENST00000563299 CNKSR2Q8WXI2 1034 aa14.7□□□□□ -0.06
UTP4-205ENST00000563299 SCAF1Q9H7N4 1312 aaKnown RBP14.65□□□□□ -0.06
UTP4-205ENST00000563299 CADPSQ9ULU8 1353 aa14.64□□□□□ -0.07
UTP4-205ENST00000563299 KIF21AQ7Z4S6 1674 aa14.64□□□□□ -0.07
UTP4-205ENST00000563299 MRC2Q9UBG0 1479 aa14.58□□□□□ -0.08
UTP4-205ENST00000563299 ZBTB22O15209 634 aa14.54□□□□□ -0.08
UTP4-205ENST00000563299 WDR62O43379 1518 aa14.54□□□□□ -0.08
UTP4-205ENST00000563299 WIZO95785 1651 aa14.53□□□□□ -0.08
UTP4-205ENST00000563299 CEP164Q9UPV0 1460 aa14.5□□□□□ -0.09
UTP4-205ENST00000563299 TRIM41Q8WV44 630 aa14.48□□□□□ -0.09
UTP4-205ENST00000563299 FANCD2Q9BXW9 1451 aa14.47□□□□□ -0.09
UTP4-205ENST00000563299 MSH5O43196 834 aa14.47□□□□□ -0.09
UTP4-205ENST00000563299 CFTRP13569 1480 aa14.44□□□□□ -0.1
UTP4-205ENST00000563299 RSF1Q96T23 1441 aaPredicted RBP14.41□□□□□ -0.1
UTP4-205ENST00000563299 TOP2AP11388 1531 aaKnown RBP14.38□□□□□ -0.11
UTP4-205ENST00000563299 URB2Q14146 1524 aaKnown RBP14.35□□□□□ -0.11
UTP4-205ENST00000563299 OSCARQ8IYS5 282 aa14.34□□□□□ -0.11
UTP4-205ENST00000563299 FOXD4L1Q9NU39 408 aa14.34□□□□□ -0.11
UTP4-205ENST00000563299 MAPK8IP2Q13387 824 aaPredicted RBP14.25□□□□□ -0.13
UTP4-205ENST00000563299 RNF216Q9NWF9 866 aaPredicted RBP14.22□□□□□ -0.13
UTP4-205ENST00000563299 CCDC88BA6NC98 1476 aa14.22□□□□□ -0.13
UTP4-205ENST00000563299 IFT140Q96RY7 1462 aa14.21□□□□□ -0.13
UTP4-205ENST00000563299 ZNF608Q9ULD9 1512 aaPredicted RBP14.2□□□□□ -0.14
UTP4-205ENST00000563299 PRDM2Q13029 1718 aa14.18□□□□□ -0.14
UTP4-205ENST00000563299 TOPBP1Q92547 1522 aa14.17□□□□□ -0.14
UTP4-205ENST00000563299 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
UTP4-205ENST00000563299 RIMBP3CA6NJZ7 1639 aa14.13□□□□□ -0.15
UTP4-205ENST00000563299 RIMBP3BA6NNM3 1639 aa14.13□□□□□ -0.15
UTP4-205ENST00000563299 RIMBP3Q9UFD9 1639 aa14.13□□□□□ -0.15
UTP4-205ENST00000563299 ARHGEF11O15085 1522 aa14.1□□□□□ -0.15
UTP4-205ENST00000563299 EIF4G3O43432 1585 aaKnown RBP14.09□□□□□ -0.15
UTP4-205ENST00000563299 DNMBPQ6XZF7 1577 aa14.09□□□□□ -0.15
UTP4-205ENST00000563299 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.161e-10■■■■■ 30.1
UTP4-205ENST00000563299 POLA1P09884 1462 aaPredicted RBP14.03□□□□□ -0.16
UTP4-205ENST00000563299 TARBP1Q13395 1621 aaKnown RBP14.03□□□□□ -0.16
UTP4-205ENST00000563299 CYB5RLQ6IPT4 315 aa14.02□□□□□ -0.17
UTP4-205ENST00000563299 FBLN2P98095 1184 aa14□□□□□ -0.17
UTP4-205ENST00000563299 CHD1O14646 1710 aa13.97□□□□□ -0.17
UTP4-205ENST00000563299 RAD54L2Q9Y4B4 1467 aa13.97□□□□□ -0.17
UTP4-205ENST00000563299 ARAP1Q96P48 1450 aa13.96□□□□□ -0.17
UTP4-205ENST00000563299 DMRT2Q9Y5R5 561 aa13.96□□□□□ -0.17
UTP4-205ENST00000563299 SOGA1O94964 1423 aa13.96□□□□□ -0.18
UTP4-205ENST00000563299 TDRD9Q8NDG6 1382 aaKnown RBP13.96□□□□□ -0.18
UTP4-205ENST00000563299 HOXD11P31277 338 aaPredicted RBP13.95□□□□□ -0.18
UTP4-205ENST00000563299 SNAPC4Q5SXM2 1469 aa13.91□□□□□ -0.18
UTP4-205ENST00000563299 FGD5Q6ZNL6 1462 aa13.91□□□□□ -0.18
UTP4-205ENST00000563299 TRHP20396 242 aaPredicted RBP13.9□□□□□ -0.18
UTP4-205ENST00000563299 WDR97A6NE52 1622 aa13.89□□□□□ -0.19
UTP4-205ENST00000563299 CUX1P39880 1505 aa13.87□□□□□ -0.19
UTP4-205ENST00000563299 CHMP7Q8WUX9 453 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms