Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 AC098818.2-201ENST00000564925 2320 ntBASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 AC120498.8-201ENST00000614275 531 ntBASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB18PQ96TA0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 SOX15-203ENST00000570788 1093 ntBASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB18PQ96TA0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 AL355802.2-201ENST00000402069 882 ntBASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.8■□□□□ 0.92
PCDHB18PQ96TA0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCDHB18PQ96TA0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB18PQ96TA0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHB18PQ96TA0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PCDHB18PQ96TA0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHB18PQ96TA0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHB18PQ96TA0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB18PQ96TA0 AC018445.3-201ENST00000624177 1945 ntBASIC20.78■□□□□ 0.92
PCDHB18PQ96TA0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB18PQ96TA0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHB18PQ96TA0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB18PQ96TA0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHB18PQ96TA0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB18PQ96TA0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHB18PQ96TA0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB18PQ96TA0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms