Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.94■□□□□ 0.94
O00370 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
O00370 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
O00370 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
O00370 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
O00370 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.94■□□□□ 0.94
O00370 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
O00370 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
O00370 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
O00370 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
O00370 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.94■□□□□ 0.94
O00370 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
O00370 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
O00370 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
O00370 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
O00370 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
O00370 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
O00370 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
O00370 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.93■□□□□ 0.94
O00370 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
O00370 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
O00370 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.93■□□□□ 0.94
O00370 AC128676.1-201ENST00000454392 318 ntBASIC20.93■□□□□ 0.94
O00370 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.93■□□□□ 0.94
O00370 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.93■□□□□ 0.94
O00370 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.93■□□□□ 0.94
O00370 MTDHP1-201ENST00000605323 784 ntBASIC20.93■□□□□ 0.94
O00370 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
O00370 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
O00370 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
O00370 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
O00370 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
O00370 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
O00370 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
O00370 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.93■□□□□ 0.94
O00370 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.93■□□□□ 0.94
O00370 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
O00370 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
O00370 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
O00370 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
O00370 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
O00370 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
O00370 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.92■□□□□ 0.94
O00370 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.92■□□□□ 0.94
O00370 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
O00370 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.92■□□□□ 0.94
O00370 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
O00370 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
O00370 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
O00370 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
O00370 ABHD17AP1-201ENST00000358206 933 ntBASIC20.92■□□□□ 0.94
O00370 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
O00370 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
O00370 FAM201B-201ENST00000458407 597 ntBASIC20.92■□□□□ 0.94
O00370 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
O00370 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
O00370 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
O00370 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
O00370 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
O00370 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
O00370 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
O00370 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.92■□□□□ 0.94
O00370 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
O00370 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
O00370 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.91■□□□□ 0.94
O00370 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
O00370 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
O00370 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
O00370 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
O00370 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
O00370 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
O00370 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
O00370 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
O00370 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.91■□□□□ 0.94
O00370 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.91■□□□□ 0.94
O00370 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.91■□□□□ 0.94
O00370 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
O00370 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
O00370 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.9■□□□□ 0.94
O00370 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
O00370 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
O00370 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.9■□□□□ 0.94
O00370 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
O00370 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
O00370 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
O00370 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.9■□□□□ 0.94
O00370 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
O00370 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
O00370 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
O00370 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.9■□□□□ 0.94
O00370 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
O00370 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.9■□□□□ 0.94
O00370 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
O00370 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.9■□□□□ 0.94
O00370 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.9■□□□□ 0.94
O00370 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.9■□□□□ 0.94
O00370 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.9■□□□□ 0.94
O00370 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
O00370 ITM2C-210ENST00000620962 501 ntBASIC20.9■□□□□ 0.94
O00370 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms