Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A1P43005 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A1P43005 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A1P43005 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A1P43005 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A1P43005 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC1A1P43005 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC1A1P43005 CROCCP5-201ENST00000436658 830 ntBASIC20.59■□□□□ 0.89
SLC1A1P43005 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A1P43005 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SLC1A1P43005 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A1P43005 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A1P43005 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.59■□□□□ 0.89
SLC1A1P43005 AC098818.2-201ENST00000564925 2320 ntBASIC20.59■□□□□ 0.89
SLC1A1P43005 TFP1-202ENST00000475455 1573 ntBASIC20.59■□□□□ 0.89
SLC1A1P43005 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SLC1A1P43005 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.58■□□□□ 0.89
SLC1A1P43005 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SLC1A1P43005 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC1A1P43005 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC1A1P43005 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC1A1P43005 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC1A1P43005 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLC1A1P43005 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC1A1P43005 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC1A1P43005 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC1A1P43005 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC1A1P43005 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.58■□□□□ 0.89
SLC1A1P43005 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC1A1P43005 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC1A1P43005 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.58■□□□□ 0.89
SLC1A1P43005 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SLC1A1P43005 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SLC1A1P43005 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SLC1A1P43005 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.58■□□□□ 0.89
SLC1A1P43005 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SLC1A1P43005 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC1A1P43005 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.58■□□□□ 0.88
SLC1A1P43005 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC1A1P43005 AP000974.1-201ENST00000623909 2387 ntBASIC20.58■□□□□ 0.88
SLC1A1P43005 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC1A1P43005 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SLC1A1P43005 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SLC1A1P43005 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.58■□□□□ 0.88
SLC1A1P43005 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A1P43005 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC1A1P43005 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A1P43005 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A1P43005 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC1A1P43005 MIPEPP3-201ENST00000412105 444 ntBASIC20.57■□□□□ 0.88
SLC1A1P43005 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.57■□□□□ 0.88
SLC1A1P43005 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.57■□□□□ 0.88
SLC1A1P43005 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SLC1A1P43005 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.57■□□□□ 0.88
SLC1A1P43005 AL121832.2-201ENST00000610979 668 ntBASIC20.57■□□□□ 0.88
SLC1A1P43005 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A1P43005 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.57■□□□□ 0.88
SLC1A1P43005 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SLC1A1P43005 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A1P43005 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLC1A1P43005 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC1A1P43005 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A1P43005 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A1P43005 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A1P43005 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SLC1A1P43005 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A1P43005 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC1A1P43005 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SLC1A1P43005 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.56■□□□□ 0.88
SLC1A1P43005 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.56■□□□□ 0.88
SLC1A1P43005 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC1A1P43005 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A1P43005 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A1P43005 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A1P43005 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A1P43005 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.56■□□□□ 0.88
SLC1A1P43005 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.56■□□□□ 0.88
SLC1A1P43005 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.56■□□□□ 0.88
SLC1A1P43005 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLC1A1P43005 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A1P43005 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A1P43005 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.55■□□□□ 0.88
SLC1A1P43005 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC1A1P43005 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A1P43005 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.55■□□□□ 0.88
SLC1A1P43005 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A1P43005 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A1P43005 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.55■□□□□ 0.88
SLC1A1P43005 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC1A1P43005 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC1A1P43005 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A1P43005 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.55■□□□□ 0.88
SLC1A1P43005 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.55■□□□□ 0.88
SLC1A1P43005 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A1P43005 AC092118.2-201ENST00000613495 667 ntBASIC20.55■□□□□ 0.88
SLC1A1P43005 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC1A1P43005 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SLC1A1P43005 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SLC1A1P43005 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SLC1A1P43005 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms