Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PSMD4P55036 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PSMD4P55036 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PSMD4P55036 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
PSMD4P55036 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PSMD4P55036 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PSMD4P55036 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PSMD4P55036 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.34■□□□□ 0.53
PSMD4P55036 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.34■□□□□ 0.53
PSMD4P55036 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PSMD4P55036 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.34■□□□□ 0.53
PSMD4P55036 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PSMD4P55036 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PSMD4P55036 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PSMD4P55036 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PSMD4P55036 AP001271.2-201ENST00000624018 1556 ntBASIC18.34■□□□□ 0.53
PSMD4P55036 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PSMD4P55036 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PSMD4P55036 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
PSMD4P55036 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.33■□□□□ 0.53
PSMD4P55036 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PSMD4P55036 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PSMD4P55036 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PSMD4P55036 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PSMD4P55036 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.33■□□□□ 0.53
PSMD4P55036 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PSMD4P55036 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PSMD4P55036 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PSMD4P55036 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PSMD4P55036 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.33■□□□□ 0.52
PSMD4P55036 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PSMD4P55036 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.33■□□□□ 0.52
PSMD4P55036 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.33■□□□□ 0.52
PSMD4P55036 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.33■□□□□ 0.52
PSMD4P55036 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.33■□□□□ 0.52
PSMD4P55036 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.33■□□□□ 0.52
PSMD4P55036 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PSMD4P55036 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PSMD4P55036 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PSMD4P55036 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PSMD4P55036 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PSMD4P55036 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PSMD4P55036 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.33■□□□□ 0.52
PSMD4P55036 PHGDH-210ENST00000641115 1638 ntBASIC18.33■□□□□ 0.52
PSMD4P55036 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PSMD4P55036 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.33■□□□□ 0.52
PSMD4P55036 AC009237.14-201ENST00000609975 1594 ntBASIC18.33■□□□□ 0.52
PSMD4P55036 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PSMD4P55036 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PSMD4P55036 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PSMD4P55036 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.33■□□□□ 0.52
PSMD4P55036 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PSMD4P55036 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.32■□□□□ 0.52
PSMD4P55036 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.32■□□□□ 0.52
PSMD4P55036 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.32■□□□□ 0.52
PSMD4P55036 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PSMD4P55036 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.32■□□□□ 0.52
PSMD4P55036 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PSMD4P55036 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PSMD4P55036 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PSMD4P55036 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.32■□□□□ 0.52
PSMD4P55036 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.32■□□□□ 0.52
PSMD4P55036 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.32■□□□□ 0.52
PSMD4P55036 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PSMD4P55036 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.32■□□□□ 0.52
PSMD4P55036 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.32■□□□□ 0.52
PSMD4P55036 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.32■□□□□ 0.52
PSMD4P55036 AC006557.6-201ENST00000623071 864 ntBASIC18.32■□□□□ 0.52
PSMD4P55036 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PSMD4P55036 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PSMD4P55036 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
PSMD4P55036 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PSMD4P55036 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PSMD4P55036 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PSMD4P55036 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PSMD4P55036 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PSMD4P55036 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PSMD4P55036 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PSMD4P55036 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PSMD4P55036 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PSMD4P55036 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PSMD4P55036 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PSMD4P55036 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.31■□□□□ 0.52
PSMD4P55036 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
PSMD4P55036 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PSMD4P55036 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.31■□□□□ 0.52
PSMD4P55036 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.31■□□□□ 0.52
PSMD4P55036 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PSMD4P55036 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.31■□□□□ 0.52
PSMD4P55036 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.31■□□□□ 0.52
PSMD4P55036 KRT18P6-201ENST00000555540 1265 ntBASIC18.31■□□□□ 0.52
PSMD4P55036 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.31■□□□□ 0.52
PSMD4P55036 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.31■□□□□ 0.52
PSMD4P55036 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PSMD4P55036 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PSMD4P55036 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PSMD4P55036 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PSMD4P55036 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PSMD4P55036 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PSMD4P55036 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms