RNA–Protein interactions for RNA: ENST00000353662.4

ACAP3-201, Transcript of ArfGAP with coiled-coil, ankyrin repeat and PH domains 3, humanhuman

TSL 1 (best) BASIC

Gene ACAP3, Length 2,280 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3-201ENST00000353662 NISCHQ9Y2I1 1504 aa43.67■■■■■ 4.58
ACAP3-201ENST00000353662 CCDC180Q9P1Z9 1646 aa37.64■■■■□ 3.62
ACAP3-201ENST00000353662 ZCCHC6Q5VYS8 1495 aaKnown RBP36.77■■■■□ 3.48
ACAP3-201ENST00000353662 SHROOM4Q9ULL8 1493 aa36.43■■■■□ 3.42
ACAP3-201ENST00000353662 DCAF8L2P0C7V8 631 aa36.33■■■■□ 3.41
ACAP3-201ENST00000353662 DCAF1Q9Y4B6 1507 aa35.91■■■■□ 3.34
ACAP3-201ENST00000353662 ABCC9O60706 1549 aa35.52■■■■□ 3.28
ACAP3-201ENST00000353662 SUPT5HO00267 1087 aaKnown RBP35.29■■■■□ 3.24
ACAP3-201ENST00000353662 MYO15BQ96JP2 1530 aa35.23■■■■□ 3.23
ACAP3-201ENST00000353662 SCRIBQ14160 1630 aa35.02■■■■□ 3.2
ACAP3-201ENST00000353662 NACADO15069 1562 aa35■■■■□ 3.19
ACAP3-201ENST00000353662 RB1CC1Q8TDY2 1594 aa34.62■■■■□ 3.13
ACAP3-201ENST00000353662 RSF1Q96T23 1441 aaPredicted RBP34.17■■■■□ 3.06
ACAP3-201ENST00000353662 CECR2Q9BXF3 1484 aa34.07■■■■□ 3.04
ACAP3-201ENST00000353662 UNC13AQ9UPW8 1703 aa34.02■■■■□ 3.04
ACAP3-201ENST00000353662 CHIC1Q5VXU3 224 aa33.91■■■■□ 3.02
ACAP3-201ENST00000353662 MROH2BQ7Z745 1585 aa33.87■■■■□ 3.01
ACAP3-201ENST00000353662 PABPN1Q86U42 306 aaKnown RBP eCLIP33.73■■■□□ 2.993e-7■■■■■ 27.1
ACAP3-201ENST00000353662 BICRAQ9NZM4 1560 aa33.65■■■□□ 2.98
ACAP3-201ENST00000353662 WIZO95785 1651 aa33.64■■■□□ 2.98
ACAP3-201ENST00000353662 BAZ1AQ9NRL2 1556 aaPredicted RBP33.63■■■□□ 2.97
ACAP3-201ENST00000353662 SMARCA4P51532 1647 aa33.46■■■□□ 2.95
ACAP3-201ENST00000353662 TOP2AP11388 1531 aaKnown RBP33.17■■■□□ 2.9
ACAP3-201ENST00000353662 TRIM41Q8WV44 630 aa32.99■■■□□ 2.87
ACAP3-201ENST00000353662 CCDC88BA6NC98 1476 aa32.95■■■□□ 2.86
ACAP3-201ENST00000353662 SMARCA2P51531 1590 aa32.92■■■□□ 2.86
ACAP3-201ENST00000353662 PEG3Q9GZU2 1588 aa32.89■■■□□ 2.86
ACAP3-201ENST00000353662 ATAD2BQ9ULI0 1458 aa32.81■■■□□ 2.84
ACAP3-201ENST00000353662 EIF4G1Q04637 1599 aaKnown RBP32.81■■■□□ 2.84
ACAP3-201ENST00000353662 LOC105371045A0A1W2PR82 267 aa32.8■■■□□ 2.84
ACAP3-201ENST00000353662 BAZ1BQ9UIG0 1483 aaKnown RBP32.68■■■□□ 2.82
ACAP3-201ENST00000353662 FAM9AQ8IZU1 332 aaPredicted RBP32.62■■■□□ 2.81
ACAP3-201ENST00000353662 ABCC8Q09428 1581 aa32.53■■■□□ 2.8
ACAP3-201ENST00000353662 NCAPD3P42695 1498 aa32.35■■■□□ 2.77
ACAP3-201ENST00000353662 EHMT2Q96KQ7 1210 aa32.32■■■□□ 2.76
ACAP3-201ENST00000353662 HMGXB3Q12766 1538 aa32.3■■■□□ 2.76
ACAP3-201ENST00000353662 WRNQ14191 1432 aaPredicted RBP eCLIP32.14■■■□□ 2.74
ACAP3-201ENST00000353662 SOGA1O94964 1423 aa32.04■■■□□ 2.72
ACAP3-201ENST00000353662 CC2D2AQ9P2K1 1620 aa32.03■■■□□ 2.72
ACAP3-201ENST00000353662 SYNJ1O43426 1573 aa32.01■■■□□ 2.71
ACAP3-201ENST00000353662 RUSC2Q8N2Y8 1516 aa31.91■■■□□ 2.7
ACAP3-201ENST00000353662 PCGF6Q9BYE7 350 aa31.85■■■□□ 2.69
ACAP3-201ENST00000353662 CFTRP13569 1480 aa31.82■■■□□ 2.68
ACAP3-201ENST00000353662 EEA1Q15075 1411 aa31.8■■■□□ 2.68
ACAP3-201ENST00000353662 CSRNP3Q8WYN3 585 aa31.79■■■□□ 2.68
ACAP3-201ENST00000353662 TOP2BQ02880 1626 aa31.73■■■□□ 2.67
ACAP3-201ENST00000353662 CADPSQ9ULU8 1353 aa31.65■■■□□ 2.66
ACAP3-201ENST00000353662 BIVM-ERCC5R4GMW8 1640 aa31.64■■■□□ 2.66
ACAP3-201ENST00000353662 CUX1P39880 1505 aa31.61■■■□□ 2.65
ACAP3-201ENST00000353662 PRDM2Q13029 1718 aa31.56■■■□□ 2.64
ACAP3-201ENST00000353662 UBTFP17480 764 aaKnown RBP31.55■■■□□ 2.64
ACAP3-201ENST00000353662 HRCP23327 699 aa31.52■■■□□ 2.64
ACAP3-201ENST00000353662 TRIM26Q12899 539 aaPredicted RBP31.52■■■□□ 2.64
ACAP3-201ENST00000353662 TNIKQ9UKE5 1360 aa31.51■■■□□ 2.64
ACAP3-201ENST00000353662 GOLGA3Q08378 1498 aa31.51■■■□□ 2.64
ACAP3-201ENST00000353662 CEP162Q5TB80 1403 aa31.47■■■□□ 2.63
ACAP3-201ENST00000353662 CEP164Q9UPV0 1460 aa31.44■■■□□ 2.62
ACAP3-201ENST00000353662 KIF21BO75037 1637 aa31.4■■■□□ 2.62
ACAP3-201ENST00000353662 DNAJC5BQ9UF47 199 aa31.36■■■□□ 2.61
ACAP3-201ENST00000353662 NESP48681 1621 aa31.36■■■□□ 2.61
ACAP3-201ENST00000353662 PPARGC1BQ86YN6 1023 aaKnown RBP31.36■■■□□ 2.61
ACAP3-201ENST00000353662 FANCD2Q9BXW9 1451 aa31.33■■■□□ 2.61
ACAP3-201ENST00000353662 RAPGEF2Q9Y4G8 1499 aa31.31■■■□□ 2.6
ACAP3-201ENST00000353662 KIF27Q86VH2 1401 aa31.25■■■□□ 2.59
ACAP3-201ENST00000353662 FGD5Q6ZNL6 1462 aa31.19■■■□□ 2.58
ACAP3-201ENST00000353662 PRXQ9BXM0 1461 aa31.15■■■□□ 2.58
ACAP3-201ENST00000353662 LAMC3Q9Y6N6 1575 aa31.13■■■□□ 2.57
ACAP3-201ENST00000353662 CUX2O14529 1486 aa31.13■■■□□ 2.57
ACAP3-201ENST00000353662 RANGAP1P46060 587 aaPredicted RBP31.12■■■□□ 2.57
ACAP3-201ENST00000353662 CLIP1P30622 1438 aa31.1■■■□□ 2.57
ACAP3-201ENST00000353662 ERICH3Q5RHP9 1530 aa31.07■■■□□ 2.56
ACAP3-201ENST00000353662 DNMBPQ6XZF7 1577 aa31.06■■■□□ 2.56
ACAP3-201ENST00000353662 TTBK1Q5TCY1 1321 aaPredicted RBP31.04■■■□□ 2.56
ACAP3-201ENST00000353662 TOPBP1Q92547 1522 aa31.04■■■□□ 2.56
ACAP3-201ENST00000353662 IGF1RP08069 1367 aa30.97■■■□□ 2.55
ACAP3-201ENST00000353662 RAD54L2Q9Y4B4 1467 aa30.97■■■□□ 2.55
ACAP3-201ENST00000353662 POLA1P09884 1462 aaPredicted RBP30.95■■■□□ 2.55
ACAP3-201ENST00000353662 PDS5BQ9NTI5 1447 aa30.95■■■□□ 2.55
ACAP3-201ENST00000353662 URB2Q14146 1524 aaKnown RBP30.93■■■□□ 2.54
ACAP3-201ENST00000353662 KIF21AQ7Z4S6 1674 aa30.86■■■□□ 2.53
ACAP3-201ENST00000353662 VPS8Q8N3P4 1428 aa30.84■■■□□ 2.53
ACAP3-201ENST00000353662 CARMIL1Q5VZK9 1371 aa30.83■■■□□ 2.53
ACAP3-201ENST00000353662 ABCA10Q8WWZ4 1543 aa30.83■■■□□ 2.53
ACAP3-201ENST00000353662 ARAP1Q96P48 1450 aa30.71■■■□□ 2.51
ACAP3-201ENST00000353662 APLP2Q06481 763 aa30.66■■■□□ 2.5
ACAP3-201ENST00000353662 WDR97A6NE52 1622 aa30.64■■■□□ 2.5
ACAP3-201ENST00000353662 TDRD9Q8NDG6 1382 aaKnown RBP30.64■■■□□ 2.5
ACAP3-201ENST00000353662 ARHGAP35Q9NRY4 1499 aa30.6■■■□□ 2.49
ACAP3-201ENST00000353662 MRC2Q9UBG0 1479 aa30.54■■■□□ 2.48
ACAP3-201ENST00000353662 ABCA5Q8WWZ7 1642 aa30.53■■■□□ 2.48
ACAP3-201ENST00000353662 CUL7Q14999 1698 aa30.52■■■□□ 2.48
ACAP3-201ENST00000353662 GAPVD1Q14C86 1478 aa30.52■■■□□ 2.48
ACAP3-201ENST00000353662 TARBP1Q13395 1621 aaKnown RBP30.48■■■□□ 2.47
ACAP3-201ENST00000353662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.42■■■□□ 2.46
ACAP3-201ENST00000353662 ZEB1P37275 1124 aaPredicted RBP30.42■■■□□ 2.46
ACAP3-201ENST00000353662 P3H3Q8IVL6 736 aa30.38■■■□□ 2.45
ACAP3-201ENST00000353662 KANK4Q5T7N3 995 aaPredicted RBP30.37■■■□□ 2.45
ACAP3-201ENST00000353662 ERCC6Q03468 1493 aa30.34■■■□□ 2.45
ACAP3-201ENST00000353662 AQRO60306 1485 aaKnown RBP eCLIP30.34■■■□□ 2.455e-7■■■□□ 18.4
ACAP3-201ENST00000353662 WDR62O43379 1518 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms