Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
PCP4P48539 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
PCP4P48539 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.69□□□□□ -0.22
PCP4P48539 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC13.69□□□□□ -0.22
PCP4P48539 AD000864.1-201ENST00000624076 2295 ntBASIC13.69□□□□□ -0.22
PCP4P48539 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PCP4P48539 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.68□□□□□ -0.22
PCP4P48539 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC13.68□□□□□ -0.22
PCP4P48539 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCP4P48539 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC13.68□□□□□ -0.22
PCP4P48539 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC13.68□□□□□ -0.22
PCP4P48539 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCP4P48539 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.68□□□□□ -0.22
PCP4P48539 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCP4P48539 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCP4P48539 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PCP4P48539 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
PCP4P48539 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.68□□□□□ -0.22
PCP4P48539 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCP4P48539 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PCP4P48539 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PCP4P48539 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.68□□□□□ -0.22
PCP4P48539 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCP4P48539 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
PCP4P48539 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.68□□□□□ -0.22
PCP4P48539 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.68□□□□□ -0.22
PCP4P48539 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.68□□□□□ -0.22
PCP4P48539 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCP4P48539 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCP4P48539 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC13.68□□□□□ -0.22
PCP4P48539 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCP4P48539 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCP4P48539 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PCP4P48539 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
PCP4P48539 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PCP4P48539 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PCP4P48539 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.68□□□□□ -0.22
PCP4P48539 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.67□□□□□ -0.22
PCP4P48539 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC13.67□□□□□ -0.22
PCP4P48539 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PCP4P48539 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
PCP4P48539 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.67□□□□□ -0.22
PCP4P48539 ALDH1A3-203ENST00000557963 1670 ntBASIC13.67□□□□□ -0.22
PCP4P48539 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
PCP4P48539 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 OR6D1P-203ENST00000641209 4860 ntBASIC13.67□□□□□ -0.22
PCP4P48539 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PCP4P48539 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
PCP4P48539 ERF-202ENST00000440177 2032 ntTSL 2 BASIC13.67□□□□□ -0.22
PCP4P48539 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PCP4P48539 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.67□□□□□ -0.22
PCP4P48539 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PCP4P48539 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
PCP4P48539 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCP4P48539 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.66□□□□□ -0.22
PCP4P48539 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PCP4P48539 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.66□□□□□ -0.22
PCP4P48539 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.66□□□□□ -0.22
PCP4P48539 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.66□□□□□ -0.22
PCP4P48539 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.66□□□□□ -0.22
PCP4P48539 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
PCP4P48539 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
PCP4P48539 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCP4P48539 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms