Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDX1P47902 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CDX1P47902 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDX1P47902 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDX1P47902 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDX1P47902 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.02■□□□□ 0.15
CDX1P47902 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CDX1P47902 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CDX1P47902 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.01■□□□□ 0.15
CDX1P47902 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
CDX1P47902 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CDX1P47902 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.01■□□□□ 0.15
CDX1P47902 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.01■□□□□ 0.15
CDX1P47902 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.01■□□□□ 0.15
CDX1P47902 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.01■□□□□ 0.15
CDX1P47902 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CDX1P47902 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CDX1P47902 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDX1P47902 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDX1P47902 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CDX1P47902 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CDX1P47902 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CDX1P47902 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16■□□□□ 0.15
CDX1P47902 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CDX1P47902 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDX1P47902 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CDX1P47902 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDX1P47902 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDX1P47902 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16■□□□□ 0.15
CDX1P47902 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CDX1P47902 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDX1P47902 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDX1P47902 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDX1P47902 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16■□□□□ 0.15
CDX1P47902 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16■□□□□ 0.15
CDX1P47902 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16■□□□□ 0.15
CDX1P47902 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16■□□□□ 0.15
CDX1P47902 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16■□□□□ 0.15
CDX1P47902 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CDX1P47902 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CDX1P47902 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16■□□□□ 0.15
CDX1P47902 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CDX1P47902 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CDX1P47902 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CDX1P47902 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDX1P47902 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDX1P47902 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16■□□□□ 0.15
CDX1P47902 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDX1P47902 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16■□□□□ 0.15
CDX1P47902 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16■□□□□ 0.15
CDX1P47902 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16■□□□□ 0.15
CDX1P47902 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDX1P47902 AL049812.1-201ENST00000432563 2267 ntBASIC15.99■□□□□ 0.15
CDX1P47902 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDX1P47902 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CDX1P47902 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDX1P47902 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
CDX1P47902 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDX1P47902 MCRIP2P1-201ENST00000394346 511 ntBASIC15.99■□□□□ 0.15
CDX1P47902 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDX1P47902 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.99■□□□□ 0.15
CDX1P47902 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.99■□□□□ 0.15
CDX1P47902 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.99■□□□□ 0.15
CDX1P47902 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.99■□□□□ 0.15
CDX1P47902 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC15.99■□□□□ 0.15
CDX1P47902 KRT18P6-201ENST00000555540 1265 ntBASIC15.99■□□□□ 0.15
CDX1P47902 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.99■□□□□ 0.15
CDX1P47902 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.99■□□□□ 0.15
CDX1P47902 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CDX1P47902 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDX1P47902 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CDX1P47902 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDX1P47902 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDX1P47902 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDX1P47902 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
CDX1P47902 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CDX1P47902 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDX1P47902 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDX1P47902 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CDX1P47902 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.99■□□□□ 0.15
CDX1P47902 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms