Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 AL353898.3-201ENST00000624679 1755 ntBASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 AC018688.1-201ENST00000636528 1754 ntBASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 MTCO1P28-201ENST00000574177 1528 ntBASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 MTND4P12-201ENST00000498999 1377 ntBASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 MIR1277-201ENST00000408536 78 ntBASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 MTCO2P34-201ENST00000421994 607 ntBASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 AL049610.1-201ENST00000423374 372 ntBASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 Z85994.2-201ENST00000434327 452 ntBASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 NDUFS5P5-201ENST00000437256 321 ntBASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 NIPA2P5-201ENST00000452282 464 ntBASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 CHCHD2P7-201ENST00000508008 452 ntBASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 RN7SKP248-201ENST00000516278 305 ntBASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 SNORD116-30-201ENST00000516468 85 ntBASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 RNU6-232P-201ENST00000517144 64 ntBASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 SNX18P27-201ENST00000523611 779 ntBASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 AL139174.1-201ENST00000531489 886 ntBASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 AC126177.6-201ENST00000550420 1009 ntBASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 RPL17-208ENST00000580261 669 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 AC022069.1-201ENST00000582910 658 ntBASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 AC087683.1-201ENST00000591187 441 ntBASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 EML5-201ENST00000380664 5910 ntTSL 5 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
PDZRN3Q9UPQ7 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 RBPJP6-201ENST00000411556 1431 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 RNU6-792P-201ENST00000363490 107 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 CHMP1B2P-201ENST00000399581 597 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 RNU4-22P-201ENST00000411058 166 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AC012498.1-201ENST00000424037 437 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 RPL29P7-201ENST00000440227 457 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AC073052.1-201ENST00000440417 714 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 AL451074.4-201ENST00000447545 470 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 NMNAT1P3-201ENST00000457517 888 ntBASIC9.42□□□□□ -0.9
PDZRN3Q9UPQ7 RPL32P14-201ENST00000463196 378 ntBASIC9.42□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms