RNA–Protein interactions for RNA: ENST00000358662.8

SP110-203, Transcript of SP110 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP110, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP110-203ENST00000358662 NISCHQ9Y2I1 1504 aa16.33■□□□□ 0.2
SP110-203ENST00000358662 CCDC180Q9P1Z9 1646 aa14.06□□□□□ -0.16
SP110-203ENST00000358662 ZCCHC6Q5VYS8 1495 aaKnown RBP13.73□□□□□ -0.21
SP110-203ENST00000358662 DCAF8L2P0C7V8 631 aa13.57□□□□□ -0.24
SP110-203ENST00000358662 SHROOM4Q9ULL8 1493 aa13.55□□□□□ -0.24
SP110-203ENST00000358662 DCAF1Q9Y4B6 1507 aa13.45□□□□□ -0.26
SP110-203ENST00000358662 ABCC9O60706 1549 aa13.26□□□□□ -0.29
SP110-203ENST00000358662 MYO15BQ96JP2 1530 aa13.21□□□□□ -0.29
SP110-203ENST00000358662 SUPT5HO00267 1087 aaKnown RBP13.16□□□□□ -0.3
SP110-203ENST00000358662 NACADO15069 1562 aa13.1□□□□□ -0.31
SP110-203ENST00000358662 SCRIBQ14160 1630 aa13.04□□□□□ -0.32
SP110-203ENST00000358662 RB1CC1Q8TDY2 1594 aa12.94□□□□□ -0.34
SP110-203ENST00000358662 RSF1Q96T23 1441 aaPredicted RBP12.78□□□□□ -0.36
SP110-203ENST00000358662 CECR2Q9BXF3 1484 aa12.73□□□□□ -0.37
SP110-203ENST00000358662 UNC13AQ9UPW8 1703 aa12.68□□□□□ -0.38
SP110-203ENST00000358662 CHIC1Q5VXU3 224 aa12.67□□□□□ -0.38
SP110-203ENST00000358662 MROH2BQ7Z745 1585 aa12.65□□□□□ -0.38
SP110-203ENST00000358662 PABPN1Q86U42 306 aaKnown RBP eCLIP12.61□□□□□ -0.39
SP110-203ENST00000358662 BICRAQ9NZM4 1560 aa12.59□□□□□ -0.39
SP110-203ENST00000358662 BAZ1AQ9NRL2 1556 aaPredicted RBP12.56□□□□□ -0.4
SP110-203ENST00000358662 WIZO95785 1651 aa12.54□□□□□ -0.4
SP110-203ENST00000358662 HRCP23327 699 aa12.5□□□□□ -0.41
SP110-203ENST00000358662 SMARCA4P51532 1647 aa12.49□□□□□ -0.41
SP110-203ENST00000358662 TOP2AP11388 1531 aaKnown RBP12.37□□□□□ -0.43
SP110-203ENST00000358662 TRIM41Q8WV44 630 aa12.32□□□□□ -0.44
SP110-203ENST00000358662 CCDC88BA6NC98 1476 aa12.32□□□□□ -0.44
SP110-203ENST00000358662 PEG3Q9GZU2 1588 aa12.31□□□□□ -0.44
SP110-203ENST00000358662 SMARCA2P51531 1590 aa12.28□□□□□ -0.44
SP110-203ENST00000358662 ATAD2BQ9ULI0 1458 aa12.28□□□□□ -0.44
SP110-203ENST00000358662 LOC105371045A0A1W2PR82 267 aa12.25□□□□□ -0.45
SP110-203ENST00000358662 PELP1Q8IZL8 1130 aaKnown RBP12.24□□□□□ -0.45
SP110-203ENST00000358662 EIF4G1Q04637 1599 aaKnown RBP12.23□□□□□ -0.45
SP110-203ENST00000358662 BAZ1BQ9UIG0 1483 aaKnown RBP12.2□□□□□ -0.46
SP110-203ENST00000358662 FAM9AQ8IZU1 332 aaPredicted RBP12.15□□□□□ -0.46
SP110-203ENST00000358662 NCAPD3P42695 1498 aa12.14□□□□□ -0.47
SP110-203ENST00000358662 ABCC8Q09428 1581 aa12.11□□□□□ -0.47
SP110-203ENST00000358662 PCGF6Q9BYE7 350 aa12.09□□□□□ -0.47
SP110-203ENST00000358662 HMGXB3Q12766 1538 aa12.08□□□□□ -0.48
SP110-203ENST00000358662 WRNQ14191 1432 aaPredicted RBP eCLIP12□□□□□ -0.49
SP110-203ENST00000358662 EHMT2Q96KQ7 1210 aa12□□□□□ -0.49
SP110-203ENST00000358662 PPARGC1BQ86YN6 1023 aaKnown RBP11.99□□□□□ -0.49
SP110-203ENST00000358662 SOGA1O94964 1423 aa11.96□□□□□ -0.49
SP110-203ENST00000358662 CC2D2AQ9P2K1 1620 aa11.96□□□□□ -0.49
SP110-203ENST00000358662 SYNJ1O43426 1573 aa11.93□□□□□ -0.5
SP110-203ENST00000358662 CFTRP13569 1480 aa11.92□□□□□ -0.5
SP110-203ENST00000358662 RUSC2Q8N2Y8 1516 aa11.92□□□□□ -0.5
SP110-203ENST00000358662 ZEB1P37275 1124 aaPredicted RBP11.91□□□□□ -0.5
SP110-203ENST00000358662 CSRNP3Q8WYN3 585 aa11.9□□□□□ -0.5
SP110-203ENST00000358662 TRIM26Q12899 539 aaPredicted RBP11.89□□□□□ -0.51
SP110-203ENST00000358662 EEA1Q15075 1411 aa11.89□□□□□ -0.51
SP110-203ENST00000358662 CADPSQ9ULU8 1353 aa11.86□□□□□ -0.51
SP110-203ENST00000358662 TOP2BQ02880 1626 aa11.85□□□□□ -0.51
SP110-203ENST00000358662 MYT1Q01538 1121 aa11.85□□□□□ -0.51
SP110-203ENST00000358662 BIVM-ERCC5R4GMW8 1640 aa11.81□□□□□ -0.52
SP110-203ENST00000358662 CUX1P39880 1505 aa11.8□□□□□ -0.52
SP110-203ENST00000358662 TNIKQ9UKE5 1360 aa11.78□□□□□ -0.52
SP110-203ENST00000358662 UBTFP17480 764 aaKnown RBP11.78□□□□□ -0.52
SP110-203ENST00000358662 PRDM2Q13029 1718 aa11.76□□□□□ -0.53
SP110-203ENST00000358662 DNAJC5BQ9UF47 199 aa11.76□□□□□ -0.53
SP110-203ENST00000358662 GOLGA3Q08378 1498 aa11.75□□□□□ -0.53
SP110-203ENST00000358662 CEP164Q9UPV0 1460 aa11.73□□□□□ -0.53
SP110-203ENST00000358662 CEP162Q5TB80 1403 aa11.73□□□□□ -0.53
SP110-203ENST00000358662 SCAF1Q9H7N4 1312 aaKnown RBP11.72□□□□□ -0.53
SP110-203ENST00000358662 FANCD2Q9BXW9 1451 aa11.71□□□□□ -0.54
SP110-203ENST00000358662 KIF21BO75037 1637 aa11.71□□□□□ -0.54
SP110-203ENST00000358662 NESP48681 1621 aa11.71□□□□□ -0.54
SP110-203ENST00000358662 RAPGEF2Q9Y4G8 1499 aa11.68□□□□□ -0.54
SP110-203ENST00000358662 KIF27Q86VH2 1401 aa11.68□□□□□ -0.54
SP110-203ENST00000358662 PRXQ9BXM0 1461 aa11.65□□□□□ -0.54
SP110-203ENST00000358662 FGD5Q6ZNL6 1462 aa11.64□□□□□ -0.55
SP110-203ENST00000358662 LAMC3Q9Y6N6 1575 aa11.64□□□□□ -0.55
SP110-203ENST00000358662 CUX2O14529 1486 aa11.61□□□□□ -0.55
SP110-203ENST00000358662 IGF1RP08069 1367 aa11.6□□□□□ -0.55
SP110-203ENST00000358662 ERICH3Q5RHP9 1530 aa11.6□□□□□ -0.55
SP110-203ENST00000358662 CLIP1P30622 1438 aa11.6□□□□□ -0.55
SP110-203ENST00000358662 DNMBPQ6XZF7 1577 aa11.6□□□□□ -0.55
SP110-203ENST00000358662 TOPBP1Q92547 1522 aa11.6□□□□□ -0.55
SP110-203ENST00000358662 PDS5BQ9NTI5 1447 aa11.58□□□□□ -0.55
SP110-203ENST00000358662 RANGAP1P46060 587 aaPredicted RBP11.57□□□□□ -0.56
SP110-203ENST00000358662 RAD54L2Q9Y4B4 1467 aa11.57□□□□□ -0.56
SP110-203ENST00000358662 POLA1P09884 1462 aaPredicted RBP11.56□□□□□ -0.56
SP110-203ENST00000358662 URB2Q14146 1524 aaKnown RBP11.55□□□□□ -0.56
SP110-203ENST00000358662 CARMIL1Q5VZK9 1371 aa11.53□□□□□ -0.56
SP110-203ENST00000358662 ABCA10Q8WWZ4 1543 aa11.53□□□□□ -0.56
SP110-203ENST00000358662 ACIN1Q9UKV3 1341 aaKnown RBP11.52□□□□□ -0.56
SP110-203ENST00000358662 TTBK1Q5TCY1 1321 aaPredicted RBP11.51□□□□□ -0.57
SP110-203ENST00000358662 VPS8Q8N3P4 1428 aa11.51□□□□□ -0.57
SP110-203ENST00000358662 KIF21AQ7Z4S6 1674 aa11.5□□□□□ -0.57
SP110-203ENST00000358662 ARAP1Q96P48 1450 aa11.45□□□□□ -0.58
SP110-203ENST00000358662 TDRD9Q8NDG6 1382 aaKnown RBP11.45□□□□□ -0.58
SP110-203ENST00000358662 CENPBP07199 599 aaPredicted RBP11.44□□□□□ -0.58
SP110-203ENST00000358662 APLP2Q06481 763 aa11.44□□□□□ -0.58
SP110-203ENST00000358662 ARHGAP35Q9NRY4 1499 aa11.42□□□□□ -0.58
SP110-203ENST00000358662 WDR97A6NE52 1622 aa11.42□□□□□ -0.58
SP110-203ENST00000358662 MRC2Q9UBG0 1479 aa11.41□□□□□ -0.58
SP110-203ENST00000358662 GAPVD1Q14C86 1478 aa11.41□□□□□ -0.58
SP110-203ENST00000358662 NEUROD1Q13562 356 aa11.4□□□□□ -0.59
SP110-203ENST00000358662 TARBP1Q13395 1621 aaKnown RBP11.39□□□□□ -0.59
SP110-203ENST00000358662 ABCA5Q8WWZ7 1642 aa11.39□□□□□ -0.59
SP110-203ENST00000358662 CUL7Q14999 1698 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms