RNA–Protein interactions for RNA: ENST00000237014.7

TTR-201, Transcript of transthyretin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTR, Length 957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-201ENST00000237014 AEBP2Q6ZN18 517 aaPredicted RBP23.63■■□□□ 1.37
TTR-201ENST00000237014 CHIC1Q5VXU3 224 aa22.12■■□□□ 1.13
TTR-201ENST00000237014 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
TTR-201ENST00000237014 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
TTR-201ENST00000237014 FOXD1Q16676 465 aa18.91■□□□□ 0.62
TTR-201ENST00000237014 POTEDQ86YR6 584 aa18.15■□□□□ 0.5
TTR-201ENST00000237014 NISCHQ9Y2I1 1504 aa18.05■□□□□ 0.48
TTR-201ENST00000237014 MSH5O43196 834 aa17.9■□□□□ 0.46
TTR-201ENST00000237014 PIAS4Q8N2W9 510 aaPredicted RBP17.53■□□□□ 0.4
TTR-201ENST00000237014 PLPPR3Q6T4P5 718 aa17.44■□□□□ 0.38
TTR-201ENST00000237014 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
TTR-201ENST00000237014 ADRA2BP18089 450 aa17.23■□□□□ 0.35
TTR-201ENST00000237014 CCDC180Q9P1Z9 1646 aa16.09■□□□□ 0.17
TTR-201ENST00000237014 DMRT2Q9Y5R5 561 aa16.02■□□□□ 0.16
TTR-201ENST00000237014 MAPK8IP2Q13387 824 aaPredicted RBP15.94■□□□□ 0.14
TTR-201ENST00000237014 SCAF1Q9H7N4 1312 aaKnown RBP15.85■□□□□ 0.13
TTR-201ENST00000237014 ABCC9O60706 1549 aa15.78■□□□□ 0.12
TTR-201ENST00000237014 CACNB1Q02641 598 aaPredicted RBP15.54■□□□□ 0.08
TTR-201ENST00000237014 HOXD11P31277 338 aaPredicted RBP15.29■□□□□ 0.04
TTR-201ENST00000237014 RNF39Q9H2S5 420 aa15.24■□□□□ 0.03
TTR-201ENST00000237014 DCAF8L1A6NGE4 600 aa15.22■□□□□ 0.03
TTR-201ENST00000237014 PPP4R3CPQ6ZMV5 832 aa15.2■□□□□ 0.02
TTR-201ENST00000237014 RB1CC1Q8TDY2 1594 aa15.14■□□□□ 0.01
TTR-201ENST00000237014 NACADO15069 1562 aa15.11■□□□□ 0.01
TTR-201ENST00000237014 CNKSR2Q8WXI2 1034 aa15.06■□□□□ 0
TTR-201ENST00000237014 ZCCHC6Q5VYS8 1495 aaKnown RBP15.05■□□□□ -0
TTR-201ENST00000237014 RNF216Q9NWF9 866 aaPredicted RBP15.04■□□□□ -0
TTR-201ENST00000237014 C1QBPQ07021 282 aaKnown RBP15.01□□□□□ -0.01
TTR-201ENST00000237014 MYO15BQ96JP2 1530 aa15.01□□□□□ -0.01
TTR-201ENST00000237014 DCAF8L2P0C7V8 631 aa14.97□□□□□ -0.01
TTR-201ENST00000237014 DNAJC5BQ9UF47 199 aa14.95□□□□□ -0.02
TTR-201ENST00000237014 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
TTR-201ENST00000237014 UNC13AQ9UPW8 1703 aa14.88□□□□□ -0.03
TTR-201ENST00000237014 BICRAQ9NZM4 1560 aa14.76□□□□□ -0.05
TTR-201ENST00000237014 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
TTR-201ENST00000237014 SCRIBQ14160 1630 aa14.68□□□□□ -0.06
TTR-201ENST00000237014 SHROOM4Q9ULL8 1493 aa14.53□□□□□ -0.08
TTR-201ENST00000237014 NCBP3Q53F19 620 aaKnown RBP14.51□□□□□ -0.09
TTR-201ENST00000237014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.46□□□□□ -0.09
TTR-201ENST00000237014 EIF4G1Q04637 1599 aaKnown RBP14.34□□□□□ -0.11
TTR-201ENST00000237014 CC2D2AQ9P2K1 1620 aa14.3□□□□□ -0.12
TTR-201ENST00000237014 NPM3O75607 178 aaKnown RBP14.28□□□□□ -0.12
TTR-201ENST00000237014 CECR2Q9BXF3 1484 aa14.18□□□□□ -0.14
TTR-201ENST00000237014 U3KPZ7 1027 aaPredicted RBP14.15□□□□□ -0.14
TTR-201ENST00000237014 POTEHQ6S545 545 aa14.14□□□□□ -0.15
TTR-201ENST00000237014 DSG3P32926 999 aa14.11□□□□□ -0.15
TTR-201ENST00000237014 SMARCA4P51532 1647 aa14.04□□□□□ -0.16
TTR-201ENST00000237014 SPINK5Q9NQ38 1064 aaPredicted RBP14.03□□□□□ -0.16
TTR-201ENST00000237014 CAPN15O75808 1086 aa14.01□□□□□ -0.17
TTR-201ENST00000237014 BAZ1AQ9NRL2 1556 aaPredicted RBP13.98□□□□□ -0.17
TTR-201ENST00000237014 ATAD2BQ9ULI0 1458 aa13.96□□□□□ -0.17
TTR-201ENST00000237014 NCAPD3P42695 1498 aa13.94□□□□□ -0.18
TTR-201ENST00000237014 MROH2BQ7Z745 1585 aa13.93□□□□□ -0.18
TTR-201ENST00000237014 SMARCA2P51531 1590 aa13.91□□□□□ -0.18
TTR-201ENST00000237014 PEG3Q9GZU2 1588 aa13.91□□□□□ -0.18
TTR-201ENST00000237014 HMGXB3Q12766 1538 aa13.9□□□□□ -0.19
TTR-201ENST00000237014 BAZ1BQ9UIG0 1483 aaKnown RBP13.82□□□□□ -0.2
TTR-201ENST00000237014 WIZO95785 1651 aa13.78□□□□□ -0.2
TTR-201ENST00000237014 SLC4A2P04920 1241 aa13.76□□□□□ -0.21
TTR-201ENST00000237014 APLP2Q06481 763 aa13.76□□□□□ -0.21
TTR-201ENST00000237014 ZNF219Q9P2Y4 722 aaPredicted RBP13.72□□□□□ -0.21
TTR-201ENST00000237014 RSF1Q96T23 1441 aaPredicted RBP13.72□□□□□ -0.21
TTR-201ENST00000237014 NESP48681 1621 aa13.67□□□□□ -0.22
TTR-201ENST00000237014 TRHP20396 242 aaPredicted RBP13.66□□□□□ -0.22
TTR-201ENST00000237014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.65□□□□□ -0.22
TTR-201ENST00000237014 HNRNPUL2Q1KMD3 747 aaKnown RBP13.65□□□□□ -0.22
TTR-201ENST00000237014 TOP2AP11388 1531 aaKnown RBP13.61□□□□□ -0.23
TTR-201ENST00000237014 ABCB7O75027 752 aa13.61□□□□□ -0.23
TTR-201ENST00000237014 LAMC3Q9Y6N6 1575 aa13.59□□□□□ -0.23
TTR-201ENST00000237014 KCNA4P22459 653 aa13.59□□□□□ -0.23
TTR-201ENST00000237014 ERCC6Q03468 1493 aa13.56□□□□□ -0.24
TTR-201ENST00000237014 SAMD1Q6SPF0 538 aaPredicted RBP13.54□□□□□ -0.24
TTR-201ENST00000237014 KIF21AQ7Z4S6 1674 aa13.52□□□□□ -0.25
TTR-201ENST00000237014 CADPSQ9ULU8 1353 aa13.51□□□□□ -0.25
TTR-201ENST00000237014 THOC2Q8NI27 1593 aaKnown RBP13.5□□□□□ -0.25
TTR-201ENST00000237014 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
TTR-201ENST00000237014 CUX2O14529 1486 aa13.47□□□□□ -0.25
TTR-201ENST00000237014 CFTRP13569 1480 aa13.45□□□□□ -0.26
TTR-201ENST00000237014 PDS5BQ9NTI5 1447 aa13.45□□□□□ -0.26
TTR-201ENST00000237014 CCDC88BA6NC98 1476 aa13.44□□□□□ -0.26
TTR-201ENST00000237014 FANCD2Q9BXW9 1451 aa13.38□□□□□ -0.27
TTR-201ENST00000237014 PRDM2Q13029 1718 aa13.38□□□□□ -0.27
TTR-201ENST00000237014 MRC2Q9UBG0 1479 aa13.37□□□□□ -0.27
TTR-201ENST00000237014 CEP164Q9UPV0 1460 aa13.36□□□□□ -0.27
TTR-201ENST00000237014 WDR62O43379 1518 aa13.35□□□□□ -0.27
TTR-201ENST00000237014 CHRDL2Q6WN34 429 aa13.33□□□□□ -0.28
TTR-201ENST00000237014 URB2Q14146 1524 aaKnown RBP13.29□□□□□ -0.28
TTR-201ENST00000237014 POLA2Q14181 598 aa13.25□□□□□ -0.29
TTR-201ENST00000237014 SUPT5HO00267 1087 aaKnown RBP13.24□□□□□ -0.29
TTR-201ENST00000237014 MYCNP04198 464 aaPredicted RBP13.24□□□□□ -0.29
TTR-201ENST00000237014 TOPBP1Q92547 1522 aa13.18□□□□□ -0.3
TTR-201ENST00000237014 DNMBPQ6XZF7 1577 aa13.15□□□□□ -0.3
TTR-201ENST00000237014 AKT1S1Q96B36 256 aa13.1□□□□□ -0.31
TTR-201ENST00000237014 DNAJC5Q9H3Z4 198 aa13.1□□□□□ -0.31
TTR-201ENST00000237014 ABCC8Q09428 1581 aa13.1□□□□□ -0.31
TTR-201ENST00000237014 IFT140Q96RY7 1462 aa13.08□□□□□ -0.32
TTR-201ENST00000237014 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.32
TTR-201ENST00000237014 CUX1P39880 1505 aa13.07□□□□□ -0.32
TTR-201ENST00000237014 TARBP1Q13395 1621 aaKnown RBP13.06□□□□□ -0.32
TTR-201ENST00000237014 POLA1P09884 1462 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms