RNA–Protein interactions for RNA: ENST00000255304.8

USPL1-201, Transcript of ubiquitin specific peptidase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USPL1, Length 3,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1-201ENST00000255304 NISCHQ9Y2I1 1504 aa15.69■□□□□ 0.1
USPL1-201ENST00000255304 DCAF8L2P0C7V8 631 aa13.82□□□□□ -0.2
USPL1-201ENST00000255304 CCDC180Q9P1Z9 1646 aa13.56□□□□□ -0.24
USPL1-201ENST00000255304 SHROOM4Q9ULL8 1493 aa13.3□□□□□ -0.28
USPL1-201ENST00000255304 ABCC9O60706 1549 aa13.29□□□□□ -0.28
USPL1-201ENST00000255304 SUPT5HO00267 1087 aaKnown RBP13.27□□□□□ -0.29
USPL1-201ENST00000255304 ZCCHC6Q5VYS8 1495 aaKnown RBP13.16□□□□□ -0.3
USPL1-201ENST00000255304 EHMT2Q96KQ7 1210 aa12.93□□□□□ -0.34
USPL1-201ENST00000255304 UNC13AQ9UPW8 1703 aa12.86□□□□□ -0.35
USPL1-201ENST00000255304 SCRIBQ14160 1630 aa12.8□□□□□ -0.36
USPL1-201ENST00000255304 DCAF1Q9Y4B6 1507 aa12.72□□□□□ -0.37
USPL1-201ENST00000255304 BICRAQ9NZM4 1560 aa12.61□□□□□ -0.39
USPL1-201ENST00000255304 NACADO15069 1562 aa12.6□□□□□ -0.39
USPL1-201ENST00000255304 PABPN1Q86U42 306 aaKnown RBP eCLIP12.59□□□□□ -0.39
USPL1-201ENST00000255304 RB1CC1Q8TDY2 1594 aa12.55□□□□□ -0.4
USPL1-201ENST00000255304 MYO15BQ96JP2 1530 aa12.54□□□□□ -0.4
USPL1-201ENST00000255304 PPARGC1BQ86YN6 1023 aaKnown RBP12.53□□□□□ -0.4
USPL1-201ENST00000255304 FAM9AQ8IZU1 332 aaPredicted RBP12.53□□□□□ -0.4
USPL1-201ENST00000255304 CECR2Q9BXF3 1484 aa12.49□□□□□ -0.41
USPL1-201ENST00000255304 TTBK1Q5TCY1 1321 aaPredicted RBP12.41□□□□□ -0.42
USPL1-201ENST00000255304 PCGF6Q9BYE7 350 aa12.41□□□□□ -0.42
USPL1-201ENST00000255304 HRCP23327 699 aa12.34□□□□□ -0.43
USPL1-201ENST00000255304 MROH2BQ7Z745 1585 aa12.32□□□□□ -0.44
USPL1-201ENST00000255304 DNAJC5BQ9UF47 199 aa12.31□□□□□ -0.44
USPL1-201ENST00000255304 WIZO95785 1651 aa12.28□□□□□ -0.44
USPL1-201ENST00000255304 RANGAP1P46060 587 aaPredicted RBP12.22□□□□□ -0.45
USPL1-201ENST00000255304 RSF1Q96T23 1441 aaPredicted RBP12.2□□□□□ -0.46
USPL1-201ENST00000255304 SMARCA4P51532 1647 aa12.13□□□□□ -0.47
USPL1-201ENST00000255304 PELP1Q8IZL8 1130 aaKnown RBP12.1□□□□□ -0.47
USPL1-201ENST00000255304 LOC105371045A0A1W2PR82 267 aa12.09□□□□□ -0.47
USPL1-201ENST00000255304 EIF4G1Q04637 1599 aaKnown RBP12.07□□□□□ -0.48
USPL1-201ENST00000255304 TRIM41Q8WV44 630 aa12.06□□□□□ -0.48
USPL1-201ENST00000255304 CC2D2AQ9P2K1 1620 aa11.99□□□□□ -0.49
USPL1-201ENST00000255304 BAZ1AQ9NRL2 1556 aaPredicted RBP11.97□□□□□ -0.49
USPL1-201ENST00000255304 CHIC1Q5VXU3 224 aa11.95□□□□□ -0.5
USPL1-201ENST00000255304 SCAF1Q9H7N4 1312 aaKnown RBP11.94□□□□□ -0.5
USPL1-201ENST00000255304 ATAD2BQ9ULI0 1458 aa11.94□□□□□ -0.5
USPL1-201ENST00000255304 PEG3Q9GZU2 1588 aa11.88□□□□□ -0.51
USPL1-201ENST00000255304 SMARCA2P51531 1590 aa11.88□□□□□ -0.51
USPL1-201ENST00000255304 CCDC88BA6NC98 1476 aa11.86□□□□□ -0.51
USPL1-201ENST00000255304 UBTFP17480 764 aaKnown RBP11.83□□□□□ -0.52
USPL1-201ENST00000255304 TOP2AP11388 1531 aaKnown RBP11.82□□□□□ -0.52
USPL1-201ENST00000255304 NESP48681 1621 aa11.78□□□□□ -0.52
USPL1-201ENST00000255304 ATP1B4Q9UN42 357 aaPredicted RBP11.78□□□□□ -0.52
USPL1-201ENST00000255304 APLP2Q06481 763 aa11.78□□□□□ -0.52
USPL1-201ENST00000255304 ABCC8Q09428 1581 aa11.77□□□□□ -0.53
USPL1-201ENST00000255304 BAZ1BQ9UIG0 1483 aaKnown RBP11.74□□□□□ -0.53
USPL1-201ENST00000255304 NCAPD3P42695 1498 aa11.73□□□□□ -0.53
USPL1-201ENST00000255304 CCER1Q8TC90 406 aaPredicted RBP11.72□□□□□ -0.53
USPL1-201ENST00000255304 GTF3C3Q9Y5Q9 886 aa11.67□□□□□ -0.54
USPL1-201ENST00000255304 HMGXB3Q12766 1538 aa11.67□□□□□ -0.54
USPL1-201ENST00000255304 YTHDC1Q96MU7 727 aaKnown RBP11.64□□□□□ -0.55
USPL1-201ENST00000255304 MYT1Q01538 1121 aa11.61□□□□□ -0.55
USPL1-201ENST00000255304 NEUROD1Q13562 356 aa11.61□□□□□ -0.55
USPL1-201ENST00000255304 ITGAEP38570 1179 aa11.6□□□□□ -0.55
USPL1-201ENST00000255304 SYNJ1O43426 1573 aa11.58□□□□□ -0.56
USPL1-201ENST00000255304 KIF21AQ7Z4S6 1674 aa11.57□□□□□ -0.56
USPL1-201ENST00000255304 RUSC2Q8N2Y8 1516 aa11.57□□□□□ -0.56
USPL1-201ENST00000255304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.55□□□□□ -0.56
USPL1-201ENST00000255304 HNRNPUL2Q1KMD3 747 aaKnown RBP11.55□□□□□ -0.56
USPL1-201ENST00000255304 TRIM26Q12899 539 aaPredicted RBP11.55□□□□□ -0.56
USPL1-201ENST00000255304 ACIN1Q9UKV3 1341 aaKnown RBP11.52□□□□□ -0.57
USPL1-201ENST00000255304 CFTRP13569 1480 aa11.5□□□□□ -0.57
USPL1-201ENST00000255304 CUX1P39880 1505 aa11.48□□□□□ -0.57
USPL1-201ENST00000255304 PRDM2Q13029 1718 aa11.46□□□□□ -0.57
USPL1-201ENST00000255304 CENPBP07199 599 aaPredicted RBP11.46□□□□□ -0.58
USPL1-201ENST00000255304 SOGA1O94964 1423 aa11.45□□□□□ -0.58
USPL1-201ENST00000255304 CADPSQ9ULU8 1353 aa11.42□□□□□ -0.58
USPL1-201ENST00000255304 ZEB1P37275 1124 aaPredicted RBP11.41□□□□□ -0.58
USPL1-201ENST00000255304 URB2Q14146 1524 aaKnown RBP11.41□□□□□ -0.58
USPL1-201ENST00000255304 FANCD2Q9BXW9 1451 aa11.37□□□□□ -0.59
USPL1-201ENST00000255304 CNGB1Q14028 1251 aaPredicted RBP11.37□□□□□ -0.59
USPL1-201ENST00000255304 RAD54L2Q9Y4B4 1467 aa11.36□□□□□ -0.59
USPL1-201ENST00000255304 DIEXFQ68CQ4 756 aaKnown RBP11.34□□□□□ -0.59
USPL1-201ENST00000255304 WRNQ14191 1432 aaPredicted RBP eCLIP11.33□□□□□ -0.6
USPL1-201ENST00000255304 BIVM-ERCC5R4GMW8 1640 aa11.33□□□□□ -0.6
USPL1-201ENST00000255304 TOP2BQ02880 1626 aa11.32□□□□□ -0.6
USPL1-201ENST00000255304 THOC2Q8NI27 1593 aaKnown RBP11.31□□□□□ -0.6
USPL1-201ENST00000255304 LAMC3Q9Y6N6 1575 aa11.31□□□□□ -0.6
USPL1-201ENST00000255304 TOPBP1Q92547 1522 aa11.28□□□□□ -0.6
USPL1-201ENST00000255304 CUX2O14529 1486 aa11.27□□□□□ -0.6
USPL1-201ENST00000255304 FGD5Q6ZNL6 1462 aa11.27□□□□□ -0.6
USPL1-201ENST00000255304 ARID3CA6NKF2 412 aa11.27□□□□□ -0.61
USPL1-201ENST00000255304 P3H3Q8IVL6 736 aa11.27□□□□□ -0.61
USPL1-201ENST00000255304 ZNF608Q9ULD9 1512 aaPredicted RBP11.26□□□□□ -0.61
USPL1-201ENST00000255304 POLA1P09884 1462 aaPredicted RBP11.26□□□□□ -0.61
USPL1-201ENST00000255304 WDR97A6NE52 1622 aa11.24□□□□□ -0.61
USPL1-201ENST00000255304 BCL11AQ9H165 835 aa11.24□□□□□ -0.61
USPL1-201ENST00000255304 TARBP1Q13395 1621 aaKnown RBP11.23□□□□□ -0.61
USPL1-201ENST00000255304 CEP164Q9UPV0 1460 aa11.21□□□□□ -0.61
USPL1-201ENST00000255304 POLR3GLQ9BT43 218 aa11.2□□□□□ -0.62
USPL1-201ENST00000255304 DNMBPQ6XZF7 1577 aa11.18□□□□□ -0.62
USPL1-201ENST00000255304 TDRD9Q8NDG6 1382 aaKnown RBP11.18□□□□□ -0.62
USPL1-201ENST00000255304 AQRO60306 1485 aaKnown RBP eCLIP11.17□□□□□ -0.626e-6■■■■□ 25.1
USPL1-201ENST00000255304 FAM50AQ14320 339 aaKnown RBP11.17□□□□□ -0.62
USPL1-201ENST00000255304 WDR62O43379 1518 aa11.15□□□□□ -0.62
USPL1-201ENST00000255304 RAPGEF2Q9Y4G8 1499 aa11.15□□□□□ -0.62
USPL1-201ENST00000255304 CSRNP3Q8WYN3 585 aa11.15□□□□□ -0.63
USPL1-201ENST00000255304 BCANQ96GW7 911 aa11.12□□□□□ -0.63
USPL1-201ENST00000255304 ERCC6Q03468 1493 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms