RNA–Protein interactions for RNA: ENST00000613657.4

PCDH15-226, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 6,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-226ENST00000613657 NISCHQ9Y2I1 1504 aa16.08■□□□□ 0.16
PCDH15-226ENST00000613657 CCDC180Q9P1Z9 1646 aa13.94□□□□□ -0.18
PCDH15-226ENST00000613657 DCAF1Q9Y4B6 1507 aa13.65□□□□□ -0.22
PCDH15-226ENST00000613657 MYO15BQ96JP2 1530 aa13.55□□□□□ -0.24
PCDH15-226ENST00000613657 ZCCHC6Q5VYS8 1495 aaKnown RBP13.54□□□□□ -0.24
PCDH15-226ENST00000613657 DCAF8L2P0C7V8 631 aa13.17□□□□□ -0.3
PCDH15-226ENST00000613657 NACADO15069 1562 aa13.14□□□□□ -0.31
PCDH15-226ENST00000613657 RB1CC1Q8TDY2 1594 aa12.91□□□□□ -0.34
PCDH15-226ENST00000613657 SHROOM4Q9ULL8 1493 aa12.88□□□□□ -0.35
PCDH15-226ENST00000613657 SUPT5HO00267 1087 aaKnown RBP12.77□□□□□ -0.36
PCDH15-226ENST00000613657 ABCC9O60706 1549 aa12.76□□□□□ -0.37
PCDH15-226ENST00000613657 BAZ1AQ9NRL2 1556 aaPredicted RBP12.59□□□□□ -0.39
PCDH15-226ENST00000613657 RSF1Q96T23 1441 aaPredicted RBP12.52□□□□□ -0.4
PCDH15-226ENST00000613657 SCRIBQ14160 1630 aa12.47□□□□□ -0.41
PCDH15-226ENST00000613657 CHIC1Q5VXU3 224 aa12.45□□□□□ -0.42
PCDH15-226ENST00000613657 EEA1Q15075 1411 aa12.39□□□□□ -0.43
PCDH15-226ENST00000613657 TRIM41Q8WV44 630 aa12.31□□□□□ -0.44
PCDH15-226ENST00000613657 SMARCA2P51531 1590 aa12.3□□□□□ -0.44
PCDH15-226ENST00000613657 TOP2AP11388 1531 aaKnown RBP12.22□□□□□ -0.45
PCDH15-226ENST00000613657 PEG3Q9GZU2 1588 aa12.2□□□□□ -0.46
PCDH15-226ENST00000613657 PELP1Q8IZL8 1130 aaKnown RBP12.17□□□□□ -0.46
PCDH15-226ENST00000613657 CECR2Q9BXF3 1484 aa12.16□□□□□ -0.46
PCDH15-226ENST00000613657 NCAPD3P42695 1498 aa12.16□□□□□ -0.46
PCDH15-226ENST00000613657 MROH2BQ7Z745 1585 aa12.16□□□□□ -0.46
PCDH15-226ENST00000613657 SMARCA4P51532 1647 aa12.14□□□□□ -0.47
PCDH15-226ENST00000613657 BAZ1BQ9UIG0 1483 aaKnown RBP12.12□□□□□ -0.47
PCDH15-226ENST00000613657 ATAD2BQ9ULI0 1458 aa12.09□□□□□ -0.47
PCDH15-226ENST00000613657 HMGXB3Q12766 1538 aa12.09□□□□□ -0.47
PCDH15-226ENST00000613657 MYT1Q01538 1121 aa12.05□□□□□ -0.48
PCDH15-226ENST00000613657 ZEB1P37275 1124 aaPredicted RBP12.04□□□□□ -0.48
PCDH15-226ENST00000613657 PABPN1Q86U42 306 aaKnown RBP eCLIP12□□□□□ -0.49
PCDH15-226ENST00000613657 BICRAQ9NZM4 1560 aa12□□□□□ -0.49
PCDH15-226ENST00000613657 WRNQ14191 1432 aaPredicted RBP eCLIP11.99□□□□□ -0.49
PCDH15-226ENST00000613657 CSRNP3Q8WYN3 585 aa11.97□□□□□ -0.49
PCDH15-226ENST00000613657 FAM9AQ8IZU1 332 aaPredicted RBP11.95□□□□□ -0.5
PCDH15-226ENST00000613657 CCDC88BA6NC98 1476 aa11.94□□□□□ -0.5
PCDH15-226ENST00000613657 APLP2Q06481 763 aa11.92□□□□□ -0.5
PCDH15-226ENST00000613657 ABCC8Q09428 1581 aa11.92□□□□□ -0.5
PCDH15-226ENST00000613657 TNIKQ9UKE5 1360 aa11.9□□□□□ -0.5
PCDH15-226ENST00000613657 TRIM26Q12899 539 aaPredicted RBP11.88□□□□□ -0.51
PCDH15-226ENST00000613657 CEP164Q9UPV0 1460 aa11.88□□□□□ -0.51
PCDH15-226ENST00000613657 CADPSQ9ULU8 1353 aa11.87□□□□□ -0.51
PCDH15-226ENST00000613657 ACIN1Q9UKV3 1341 aaKnown RBP11.86□□□□□ -0.51
PCDH15-226ENST00000613657 EIF4G1Q04637 1599 aaKnown RBP11.84□□□□□ -0.51
PCDH15-226ENST00000613657 GOLGA3Q08378 1498 aa11.84□□□□□ -0.51
PCDH15-226ENST00000613657 KIF27Q86VH2 1401 aa11.83□□□□□ -0.52
PCDH15-226ENST00000613657 CFTRP13569 1480 aa11.83□□□□□ -0.52
PCDH15-226ENST00000613657 WIZO95785 1651 aa11.8□□□□□ -0.52
PCDH15-226ENST00000613657 PDS5BQ9NTI5 1447 aa11.78□□□□□ -0.52
PCDH15-226ENST00000613657 UBTFP17480 764 aaKnown RBP11.76□□□□□ -0.53
PCDH15-226ENST00000613657 ERICH3Q5RHP9 1530 aa11.68□□□□□ -0.54
PCDH15-226ENST00000613657 CLIP1P30622 1438 aa11.63□□□□□ -0.55
PCDH15-226ENST00000613657 UNC13AQ9UPW8 1703 aa11.61□□□□□ -0.55
PCDH15-226ENST00000613657 FHAD1B1AJZ9 1412 aa11.61□□□□□ -0.55
PCDH15-226ENST00000613657 CEP162Q5TB80 1403 aa11.61□□□□□ -0.55
PCDH15-226ENST00000613657 CLSPNQ9HAW4 1339 aa11.61□□□□□ -0.55
PCDH15-226ENST00000613657 HRCP23327 699 aa11.6□□□□□ -0.55
PCDH15-226ENST00000613657 TOP2BQ02880 1626 aa11.6□□□□□ -0.55
PCDH15-226ENST00000613657 KIF21BO75037 1637 aa11.6□□□□□ -0.55
PCDH15-226ENST00000613657 VPS8Q8N3P4 1428 aa11.58□□□□□ -0.55
PCDH15-226ENST00000613657 LAMC3Q9Y6N6 1575 aa11.58□□□□□ -0.55
PCDH15-226ENST00000613657 PRXQ9BXM0 1461 aa11.57□□□□□ -0.56
PCDH15-226ENST00000613657 LOC105371045A0A1W2PR82 267 aa11.57□□□□□ -0.56
PCDH15-226ENST00000613657 PCGF6Q9BYE7 350 aa11.54□□□□□ -0.56
PCDH15-226ENST00000613657 FANCD2Q9BXW9 1451 aa11.53□□□□□ -0.56
PCDH15-226ENST00000613657 RAPGEF2Q9Y4G8 1499 aa11.51□□□□□ -0.57
PCDH15-226ENST00000613657 CARMIL1Q5VZK9 1371 aa11.51□□□□□ -0.57
PCDH15-226ENST00000613657 BIVM-ERCC5R4GMW8 1640 aa11.49□□□□□ -0.57
PCDH15-226ENST00000613657 CUX2O14529 1486 aa11.49□□□□□ -0.57
PCDH15-226ENST00000613657 SOGA1O94964 1423 aa11.49□□□□□ -0.57
PCDH15-226ENST00000613657 ABCA10Q8WWZ4 1543 aa11.48□□□□□ -0.57
PCDH15-226ENST00000613657 DNMBPQ6XZF7 1577 aa11.47□□□□□ -0.57
PCDH15-226ENST00000613657 MAP3K1Q13233 1512 aa11.47□□□□□ -0.57
PCDH15-226ENST00000613657 FMN1Q68DA7 1419 aa11.47□□□□□ -0.57
PCDH15-226ENST00000613657 CDK11AQ9UQ88 783 aaPredicted RBP11.46□□□□□ -0.57
PCDH15-226ENST00000613657 WDR97A6NE52 1622 aa11.45□□□□□ -0.58
PCDH15-226ENST00000613657 CC2D2AQ9P2K1 1620 aa11.44□□□□□ -0.58
PCDH15-226ENST00000613657 IGF1RP08069 1367 aa11.43□□□□□ -0.58
PCDH15-226ENST00000613657 TIMELESSQ9UNS1 1208 aa11.43□□□□□ -0.58
PCDH15-226ENST00000613657 EFCAB5A4FU69 1503 aa11.43□□□□□ -0.58
PCDH15-226ENST00000613657 CENPBP07199 599 aaPredicted RBP11.41□□□□□ -0.58
PCDH15-226ENST00000613657 SYNJ1O43426 1573 aa11.4□□□□□ -0.58
PCDH15-226ENST00000613657 FGD5Q6ZNL6 1462 aa11.39□□□□□ -0.59
PCDH15-226ENST00000613657 TOPBP1Q92547 1522 aa11.38□□□□□ -0.59
PCDH15-226ENST00000613657 AQRO60306 1485 aaKnown RBP eCLIP11.38□□□□□ -0.59
PCDH15-226ENST00000613657 IFT140Q96RY7 1462 aa11.38□□□□□ -0.59
PCDH15-226ENST00000613657 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.38□□□□□ -0.59
PCDH15-226ENST00000613657 CUX1P39880 1505 aa11.36□□□□□ -0.59
PCDH15-226ENST00000613657 MRC2Q9UBG0 1479 aa11.35□□□□□ -0.59
PCDH15-226ENST00000613657 CCER1Q8TC90 406 aaPredicted RBP11.32□□□□□ -0.6
PCDH15-226ENST00000613657 POLA1P09884 1462 aaPredicted RBP11.32□□□□□ -0.6
PCDH15-226ENST00000613657 GRIN2BQ13224 1484 aa11.32□□□□□ -0.6
PCDH15-226ENST00000613657 CUL7Q14999 1698 aa11.3□□□□□ -0.6
PCDH15-226ENST00000613657 GAPVD1Q14C86 1478 aa11.3□□□□□ -0.6
PCDH15-226ENST00000613657 CARMIL2Q6F5E8 1435 aa11.29□□□□□ -0.6
PCDH15-226ENST00000613657 CASKIN1Q8WXD9 1431 aa11.24□□□□□ -0.61
PCDH15-226ENST00000613657 THOC2Q8NI27 1593 aaKnown RBP11.24□□□□□ -0.61
PCDH15-226ENST00000613657 PRDM2Q13029 1718 aa11.24□□□□□ -0.61
PCDH15-226ENST00000613657 ERCC6Q03468 1493 aa11.23□□□□□ -0.61
PCDH15-226ENST00000613657 FYCO1Q9BQS8 1478 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms