RNA–Protein interactions for RNA: ENST00000516278.1

RN7SKP248-201, Transcript of RNA, 7SK small nuclear pseudogene 248, humanhuman

BASIC

Gene RN7SKP248, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP248-201ENST00000516278 AEBP2Q6ZN18 517 aaPredicted RBP24.36■■□□□ 1.49
RN7SKP248-201ENST00000516278 CHIC1Q5VXU3 224 aa23.82■■□□□ 1.4
RN7SKP248-201ENST00000516278 PHF23Q9BUL5 403 aaPredicted RBP20.92■□□□□ 0.94
RN7SKP248-201ENST00000516278 SENP3Q9H4L4 574 aaPredicted RBP20.76■□□□□ 0.91
RN7SKP248-201ENST00000516278 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
RN7SKP248-201ENST00000516278 FOXD1Q16676 465 aa19.22■□□□□ 0.67
RN7SKP248-201ENST00000516278 PPP6R1Q9UPN7 881 aa18.47■□□□□ 0.55
RN7SKP248-201ENST00000516278 ADRA2BP18089 450 aa18.46■□□□□ 0.55
RN7SKP248-201ENST00000516278 PIAS4Q8N2W9 510 aaPredicted RBP18.13■□□□□ 0.49
RN7SKP248-201ENST00000516278 MSH5O43196 834 aa17.78■□□□□ 0.44
RN7SKP248-201ENST00000516278 PPP4R3CPQ6ZMV5 832 aa17.05■□□□□ 0.32
RN7SKP248-201ENST00000516278 SCAF1Q9H7N4 1312 aaKnown RBP16.98■□□□□ 0.31
RN7SKP248-201ENST00000516278 MAPK8IP2Q13387 824 aaPredicted RBP16.74■□□□□ 0.27
RN7SKP248-201ENST00000516278 NCBP3Q53F19 620 aaKnown RBP16.65■□□□□ 0.26
RN7SKP248-201ENST00000516278 CNKSR2Q8WXI2 1034 aa16.6■□□□□ 0.25
RN7SKP248-201ENST00000516278 KCNA4P22459 653 aa16.59■□□□□ 0.25
RN7SKP248-201ENST00000516278 DMRT2Q9Y5R5 561 aa16.55■□□□□ 0.24
RN7SKP248-201ENST00000516278 NPM3O75607 178 aaKnown RBP16.33■□□□□ 0.2
RN7SKP248-201ENST00000516278 RNF216Q9NWF9 866 aaPredicted RBP16.28■□□□□ 0.2
RN7SKP248-201ENST00000516278 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.19
RN7SKP248-201ENST00000516278 POTEDQ86YR6 584 aa16.18■□□□□ 0.18
RN7SKP248-201ENST00000516278 DNAJC5BQ9UF47 199 aa15.93■□□□□ 0.14
RN7SKP248-201ENST00000516278 SLC4A1APQ9BWU0 796 aaKnown RBP15.83■□□□□ 0.12
RN7SKP248-201ENST00000516278 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
RN7SKP248-201ENST00000516278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.44■□□□□ 0.06
RN7SKP248-201ENST00000516278 SLC4A2P04920 1241 aa15.42■□□□□ 0.06
RN7SKP248-201ENST00000516278 EHMT2Q96KQ7 1210 aa15.31■□□□□ 0.04
RN7SKP248-201ENST00000516278 FOXD4L1Q9NU39 408 aa15.3■□□□□ 0.04
RN7SKP248-201ENST00000516278 ZBTB22O15209 634 aa15.23■□□□□ 0.03
RN7SKP248-201ENST00000516278 RNF39Q9H2S5 420 aa15.21■□□□□ 0.03
RN7SKP248-201ENST00000516278 CSRNP3Q8WYN3 585 aa15.18■□□□□ 0.02
RN7SKP248-201ENST00000516278 U3KPZ7 1027 aaPredicted RBP15.16■□□□□ 0.02
RN7SKP248-201ENST00000516278 MYCNP04198 464 aaPredicted RBP15.12■□□□□ 0.01
RN7SKP248-201ENST00000516278 C1QBPQ07021 282 aaKnown RBP15.07■□□□□ 0
RN7SKP248-201ENST00000516278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.05■□□□□ -0
RN7SKP248-201ENST00000516278 HNRNPUL2Q1KMD3 747 aaKnown RBP15.05■□□□□ -0
RN7SKP248-201ENST00000516278 SAMD1Q6SPF0 538 aaPredicted RBP14.96□□□□□ -0.01
RN7SKP248-201ENST00000516278 APLP2Q06481 763 aa14.91□□□□□ -0.02
RN7SKP248-201ENST00000516278 ATXN8OSP0DMR3 200 aa14.83□□□□□ -0.04
RN7SKP248-201ENST00000516278 CACNB1Q02641 598 aaPredicted RBP14.83□□□□□ -0.04
RN7SKP248-201ENST00000516278 SPINK5Q9NQ38 1064 aaPredicted RBP14.73□□□□□ -0.05
RN7SKP248-201ENST00000516278 CAPN15O75808 1086 aa14.71□□□□□ -0.05
RN7SKP248-201ENST00000516278 ATF5Q9Y2D1 282 aaPredicted RBP14.66□□□□□ -0.06
RN7SKP248-201ENST00000516278 ZNF219Q9P2Y4 722 aaPredicted RBP14.65□□□□□ -0.06
RN7SKP248-201ENST00000516278 TRHP20396 242 aaPredicted RBP14.62□□□□□ -0.07
RN7SKP248-201ENST00000516278 DSG3P32926 999 aa14.46□□□□□ -0.09
RN7SKP248-201ENST00000516278 POLA2Q14181 598 aa14.4□□□□□ -0.1
RN7SKP248-201ENST00000516278 ABCB7O75027 752 aa14.38□□□□□ -0.11
RN7SKP248-201ENST00000516278 ZBTB12Q9Y330 459 aaPredicted RBP14.2□□□□□ -0.14
RN7SKP248-201ENST00000516278 FBLN2P98095 1184 aa14.13□□□□□ -0.15
RN7SKP248-201ENST00000516278 MKRN4PQ13434 485 aaPredicted RBP14.03□□□□□ -0.16
RN7SKP248-201ENST00000516278 OSCARQ8IYS5 282 aa13.86□□□□□ -0.19
RN7SKP248-201ENST00000516278 RBM42Q9BTD8 480 aaKnown RBP13.83□□□□□ -0.2
RN7SKP248-201ENST00000516278 SPDYE2BA6NHP3 402 aa13.8□□□□□ -0.2
RN7SKP248-201ENST00000516278 SPDYE6P0CI01 402 aa13.8□□□□□ -0.2
RN7SKP248-201ENST00000516278 SPDYE2Q495Y8 402 aa13.8□□□□□ -0.2
RN7SKP248-201ENST00000516278 SPDYE4A6NLX3 237 aa13.75□□□□□ -0.21
RN7SKP248-201ENST00000516278 ZNF692Q9BU19 519 aaPredicted RBP13.73□□□□□ -0.21
RN7SKP248-201ENST00000516278 FKBP8Q14318 412 aa13.72□□□□□ -0.21
RN7SKP248-201ENST00000516278 SSUH2Q9Y2M2 353 aa13.65□□□□□ -0.22
RN7SKP248-201ENST00000516278 AKT1S1Q96B36 256 aa13.64□□□□□ -0.23
RN7SKP248-201ENST00000516278 PABPN1Q86U42 306 aaKnown RBP eCLIP13.53□□□□□ -0.24
RN7SKP248-201ENST00000516278 PROM2Q8N271 834 aa13.52□□□□□ -0.25
RN7SKP248-201ENST00000516278 REM2Q8IYK8 340 aaPredicted RBP13.49□□□□□ -0.25
RN7SKP248-201ENST00000516278 SPDYE1Q8NFV5 336 aaPredicted RBP13.4□□□□□ -0.26
RN7SKP248-201ENST00000516278 STAG3Q9UJ98 1225 aa13.37□□□□□ -0.27
RN7SKP248-201ENST00000516278 FBXO3Q9UK99 471 aa13.32□□□□□ -0.28
RN7SKP248-201ENST00000516278 PITPNM1O00562 1244 aa13.31□□□□□ -0.28
RN7SKP248-201ENST00000516278 CLEC11AQ9Y240 323 aa13.31□□□□□ -0.28
RN7SKP248-201ENST00000516278 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
RN7SKP248-201ENST00000516278 PRR29P0C7W0 189 aa13.21□□□□□ -0.29
RN7SKP248-201ENST00000516278 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.31
RN7SKP248-201ENST00000516278 VASPP50552 380 aaPredicted RBP13.07□□□□□ -0.32
RN7SKP248-201ENST00000516278 MIER1Q8N108 512 aa13.07□□□□□ -0.32
RN7SKP248-201ENST00000516278 PLEKHG5O94827 1062 aa13.03□□□□□ -0.32
RN7SKP248-201ENST00000516278 PLCD3Q8N3E9 789 aa13.03□□□□□ -0.32
RN7SKP248-201ENST00000516278 PIP4P2Q8N4L2 257 aa13.03□□□□□ -0.32
RN7SKP248-201ENST00000516278 CREBZFQ9NS37 354 aa13□□□□□ -0.33
RN7SKP248-201ENST00000516278 PRKAR2AP13861 404 aaKnown RBP12.99□□□□□ -0.33
RN7SKP248-201ENST00000516278 CHADLQ6NUI6 762 aa12.95□□□□□ -0.34
RN7SKP248-201ENST00000516278 ZBTB47Q9UFB7 747 aaPredicted RBP12.93□□□□□ -0.34
RN7SKP248-201ENST00000516278 IFNLR1Q8IU57 520 aaPredicted RBP12.88□□□□□ -0.35
RN7SKP248-201ENST00000516278 KLHL34Q8N239 644 aa12.88□□□□□ -0.35
RN7SKP248-201ENST00000516278 FARP1Q9Y4F1 1045 aaPredicted RBP12.88□□□□□ -0.35
RN7SKP248-201ENST00000516278 MNX1P50219 401 aaPredicted RBP12.86□□□□□ -0.35
RN7SKP248-201ENST00000516278 NPM1P06748 294 aaKnown RBP eCLIP12.85□□□□□ -0.35
RN7SKP248-201ENST00000516278 POTEHQ6S545 545 aa12.82□□□□□ -0.36
RN7SKP248-201ENST00000516278 SPOCK2Q92563 424 aa12.76□□□□□ -0.37
RN7SKP248-201ENST00000516278 NUBP1P53384 320 aa12.7□□□□□ -0.38
RN7SKP248-201ENST00000516278 HAX1O00165 279 aa12.65□□□□□ -0.38
RN7SKP248-201ENST00000516278 C19orf67A6NJJ6 358 aa12.64□□□□□ -0.39
RN7SKP248-201ENST00000516278 PAK3O75914 559 aaPredicted RBP12.63□□□□□ -0.39
RN7SKP248-201ENST00000516278 RASEFQ8IZ41 740 aa12.63□□□□□ -0.39
RN7SKP248-201ENST00000516278 FAM212AQ96EL1 285 aa12.62□□□□□ -0.39
RN7SKP248-201ENST00000516278 CD44P16070 742 aaKnown RBP12.61□□□□□ -0.39
RN7SKP248-201ENST00000516278 GSE1Q14687 1217 aa12.6□□□□□ -0.39
RN7SKP248-201ENST00000516278 DCAF8Q5TAQ9 597 aa12.6□□□□□ -0.39
RN7SKP248-201ENST00000516278 TSPYL2Q9H2G4 693 aaPredicted RBP12.58□□□□□ -0.4
RN7SKP248-201ENST00000516278 CIZ1Q9ULV3 898 aaPredicted RBP12.56□□□□□ -0.4
RN7SKP248-201ENST00000516278 ZRANB1Q9UGI0 708 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms