RNA–Protein interactions for RNA: ENST00000533106.1

AP001257.1-201, humanhuman

TSL 3 BASIC

Gene AP001257.1, Length 385 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001257.1-201ENST00000533106 AEBP2Q6ZN18 517 aaPredicted RBP19.78■□□□□ 0.76
AP001257.1-201ENST00000533106 CHIC1Q5VXU3 224 aa19.25■□□□□ 0.67
AP001257.1-201ENST00000533106 NISCHQ9Y2I1 1504 aa17.65■□□□□ 0.42
AP001257.1-201ENST00000533106 SENP3Q9H4L4 574 aaPredicted RBP17.1■□□□□ 0.33
AP001257.1-201ENST00000533106 PHF23Q9BUL5 403 aaPredicted RBP16.99■□□□□ 0.31
AP001257.1-201ENST00000533106 FOXD1Q16676 465 aa15.86■□□□□ 0.13
AP001257.1-201ENST00000533106 PLPPR3Q6T4P5 718 aa15.77■□□□□ 0.12
AP001257.1-201ENST00000533106 CCDC180Q9P1Z9 1646 aa15.67■□□□□ 0.1
AP001257.1-201ENST00000533106 ABCC9O60706 1549 aa15.41■□□□□ 0.06
AP001257.1-201ENST00000533106 MSH5O43196 834 aa15.08■□□□□ 0
AP001257.1-201ENST00000533106 POTEDQ86YR6 584 aa15.03■□□□□ -0
AP001257.1-201ENST00000533106 ADRA2BP18089 450 aa14.91□□□□□ -0.02
AP001257.1-201ENST00000533106 PPP6R1Q9UPN7 881 aa14.9□□□□□ -0.02
AP001257.1-201ENST00000533106 DCAF8L2P0C7V8 631 aa14.85□□□□□ -0.03
AP001257.1-201ENST00000533106 RB1CC1Q8TDY2 1594 aa14.8□□□□□ -0.04
AP001257.1-201ENST00000533106 PIAS4Q8N2W9 510 aaPredicted RBP14.79□□□□□ -0.04
AP001257.1-201ENST00000533106 NACADO15069 1562 aa14.77□□□□□ -0.04
AP001257.1-201ENST00000533106 ZCCHC6Q5VYS8 1495 aaKnown RBP14.69□□□□□ -0.06
AP001257.1-201ENST00000533106 MYO15BQ96JP2 1530 aa14.67□□□□□ -0.06
AP001257.1-201ENST00000533106 DCAF1Q9Y4B6 1507 aa14.6□□□□□ -0.07
AP001257.1-201ENST00000533106 PABPN1Q86U42 306 aaKnown RBP eCLIP14.43□□□□□ -0.1
AP001257.1-201ENST00000533106 UNC13AQ9UPW8 1703 aa14.38□□□□□ -0.11
AP001257.1-201ENST00000533106 BICRAQ9NZM4 1560 aa14.32□□□□□ -0.12
AP001257.1-201ENST00000533106 SCRIBQ14160 1630 aa14.31□□□□□ -0.12
AP001257.1-201ENST00000533106 SHROOM4Q9ULL8 1493 aa14.2□□□□□ -0.14
AP001257.1-201ENST00000533106 DNAJC5BQ9UF47 199 aa14.18□□□□□ -0.14
AP001257.1-201ENST00000533106 KCNA4P22459 653 aa14.03□□□□□ -0.16
AP001257.1-201ENST00000533106 EIF4G1Q04637 1599 aaKnown RBP13.96□□□□□ -0.17
AP001257.1-201ENST00000533106 PPP4R3CPQ6ZMV5 832 aa13.95□□□□□ -0.18
AP001257.1-201ENST00000533106 CC2D2AQ9P2K1 1620 aa13.91□□□□□ -0.18
AP001257.1-201ENST00000533106 CECR2Q9BXF3 1484 aa13.86□□□□□ -0.19
AP001257.1-201ENST00000533106 BAZ1AQ9NRL2 1556 aaPredicted RBP13.69□□□□□ -0.22
AP001257.1-201ENST00000533106 SMARCA4P51532 1647 aa13.68□□□□□ -0.22
AP001257.1-201ENST00000533106 NCBP3Q53F19 620 aaKnown RBP13.65□□□□□ -0.22
AP001257.1-201ENST00000533106 NCAPD3P42695 1498 aa13.65□□□□□ -0.22
AP001257.1-201ENST00000533106 ATAD2BQ9ULI0 1458 aa13.64□□□□□ -0.23
AP001257.1-201ENST00000533106 SMARCA2P51531 1590 aa13.62□□□□□ -0.23
AP001257.1-201ENST00000533106 MROH2BQ7Z745 1585 aa13.6□□□□□ -0.23
AP001257.1-201ENST00000533106 SCAF1Q9H7N4 1312 aaKnown RBP13.57□□□□□ -0.24
AP001257.1-201ENST00000533106 HMGXB3Q12766 1538 aa13.55□□□□□ -0.24
AP001257.1-201ENST00000533106 PEG3Q9GZU2 1588 aa13.54□□□□□ -0.24
AP001257.1-201ENST00000533106 BAZ1BQ9UIG0 1483 aaKnown RBP13.54□□□□□ -0.24
AP001257.1-201ENST00000533106 NPM3O75607 178 aaKnown RBP13.49□□□□□ -0.25
AP001257.1-201ENST00000533106 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
AP001257.1-201ENST00000533106 DMRT2Q9Y5R5 561 aa13.47□□□□□ -0.25
AP001257.1-201ENST00000533106 RSF1Q96T23 1441 aaPredicted RBP13.45□□□□□ -0.26
AP001257.1-201ENST00000533106 MAPK8IP2Q13387 824 aaPredicted RBP13.44□□□□□ -0.26
AP001257.1-201ENST00000533106 EHMT2Q96KQ7 1210 aa13.44□□□□□ -0.26
AP001257.1-201ENST00000533106 WIZO95785 1651 aa13.44□□□□□ -0.26
AP001257.1-201ENST00000533106 SLC4A1APQ9BWU0 796 aaKnown RBP13.4□□□□□ -0.26
AP001257.1-201ENST00000533106 NESP48681 1621 aa13.31□□□□□ -0.28
AP001257.1-201ENST00000533106 ERCC6Q03468 1493 aa13.3□□□□□ -0.28
AP001257.1-201ENST00000533106 TOP2AP11388 1531 aaKnown RBP13.3□□□□□ -0.28
AP001257.1-201ENST00000533106 LAMC3Q9Y6N6 1575 aa13.28□□□□□ -0.28
AP001257.1-201ENST00000533106 CADPSQ9ULU8 1353 aa13.27□□□□□ -0.29
AP001257.1-201ENST00000533106 PDS5BQ9NTI5 1447 aa13.23□□□□□ -0.29
AP001257.1-201ENST00000533106 CCDC88BA6NC98 1476 aa13.16□□□□□ -0.3
AP001257.1-201ENST00000533106 CUX2O14529 1486 aa13.16□□□□□ -0.3
AP001257.1-201ENST00000533106 CFTRP13569 1480 aa13.16□□□□□ -0.3
AP001257.1-201ENST00000533106 SUPT5HO00267 1087 aaKnown RBP13.14□□□□□ -0.31
AP001257.1-201ENST00000533106 RNF216Q9NWF9 866 aaPredicted RBP13.12□□□□□ -0.31
AP001257.1-201ENST00000533106 CSRNP3Q8WYN3 585 aa13.11□□□□□ -0.31
AP001257.1-201ENST00000533106 KIF21AQ7Z4S6 1674 aa13.11□□□□□ -0.31
AP001257.1-201ENST00000533106 FANCD2Q9BXW9 1451 aa13.1□□□□□ -0.31
AP001257.1-201ENST00000533106 CEP164Q9UPV0 1460 aa13.09□□□□□ -0.31
AP001257.1-201ENST00000533106 THOC2Q8NI27 1593 aaKnown RBP13.08□□□□□ -0.32
AP001257.1-201ENST00000533106 MRC2Q9UBG0 1479 aa13.07□□□□□ -0.32
AP001257.1-201ENST00000533106 CACNB1Q02641 598 aaPredicted RBP13.06□□□□□ -0.32
AP001257.1-201ENST00000533106 WDR62O43379 1518 aa13.01□□□□□ -0.33
AP001257.1-201ENST00000533106 HOXD11P31277 338 aaPredicted RBP12.98□□□□□ -0.33
AP001257.1-201ENST00000533106 PRDM2Q13029 1718 aa12.97□□□□□ -0.33
AP001257.1-201ENST00000533106 URB2Q14146 1524 aaKnown RBP12.95□□□□□ -0.34
AP001257.1-201ENST00000533106 DCAF8L1A6NGE4 600 aa12.93□□□□□ -0.34
AP001257.1-201ENST00000533106 ZBTB22O15209 634 aa12.92□□□□□ -0.34
AP001257.1-201ENST00000533106 ABCC8Q09428 1581 aa12.9□□□□□ -0.35
AP001257.1-201ENST00000533106 TOPBP1Q92547 1522 aa12.88□□□□□ -0.35
AP001257.1-201ENST00000533106 DNMBPQ6XZF7 1577 aa12.85□□□□□ -0.35
AP001257.1-201ENST00000533106 DNAJC5Q9H3Z4 198 aa12.83□□□□□ -0.36
AP001257.1-201ENST00000533106 IFT140Q96RY7 1462 aa12.82□□□□□ -0.36
AP001257.1-201ENST00000533106 FOXD4L1Q9NU39 408 aa12.78□□□□□ -0.36
AP001257.1-201ENST00000533106 RNF39Q9H2S5 420 aa12.77□□□□□ -0.37
AP001257.1-201ENST00000533106 POLA1P09884 1462 aaPredicted RBP12.76□□□□□ -0.37
AP001257.1-201ENST00000533106 CUX1P39880 1505 aa12.75□□□□□ -0.37
AP001257.1-201ENST00000533106 ZNF608Q9ULD9 1512 aaPredicted RBP12.74□□□□□ -0.37
AP001257.1-201ENST00000533106 SOGA1O94964 1423 aa12.74□□□□□ -0.37
AP001257.1-201ENST00000533106 FGD5Q6ZNL6 1462 aa12.73□□□□□ -0.37
AP001257.1-201ENST00000533106 RAD54L2Q9Y4B4 1467 aa12.72□□□□□ -0.37
AP001257.1-201ENST00000533106 TARBP1Q13395 1621 aaKnown RBP12.7□□□□□ -0.38
AP001257.1-201ENST00000533106 WRNQ14191 1432 aaPredicted RBP eCLIP12.7□□□□□ -0.38
AP001257.1-201ENST00000533106 AQRO60306 1485 aaKnown RBP eCLIP12.69□□□□□ -0.38
AP001257.1-201ENST00000533106 TDRD9Q8NDG6 1382 aaKnown RBP12.68□□□□□ -0.38
AP001257.1-201ENST00000533106 OSCARQ8IYS5 282 aa12.67□□□□□ -0.38
AP001257.1-201ENST00000533106 EIF4G3O43432 1585 aaKnown RBP12.67□□□□□ -0.38
AP001257.1-201ENST00000533106 SLC4A2P04920 1241 aa12.66□□□□□ -0.38
AP001257.1-201ENST00000533106 C1QBPQ07021 282 aaKnown RBP12.65□□□□□ -0.38
AP001257.1-201ENST00000533106 TOP2BQ02880 1626 aa12.63□□□□□ -0.39
AP001257.1-201ENST00000533106 SYNJ1O43426 1573 aa12.62□□□□□ -0.39
AP001257.1-201ENST00000533106 WDR97A6NE52 1622 aa12.62□□□□□ -0.39
AP001257.1-201ENST00000533106 BIVM-ERCC5R4GMW8 1640 aa12.62□□□□□ -0.39
AP001257.1-201ENST00000533106 ABCA10Q8WWZ4 1543 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms