RNA–Protein interactions for RNA: ENST00000370819.5

COL21A1-203, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL21A1, Length 4,094 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-203ENST00000370819 DCAF8L2P0C7V8 631 aa13.18□□□□□ -0.3
COL21A1-203ENST00000370819 NISCHQ9Y2I1 1504 aa12.99□□□□□ -0.33
COL21A1-203ENST00000370819 SUPT5HO00267 1087 aaKnown RBP12.84□□□□□ -0.35
COL21A1-203ENST00000370819 SHROOM4Q9ULL8 1493 aa12.57□□□□□ -0.4
COL21A1-203ENST00000370819 EHMT2Q96KQ7 1210 aa12.42□□□□□ -0.42
COL21A1-203ENST00000370819 PCGF6Q9BYE7 350 aa12.24□□□□□ -0.45
COL21A1-203ENST00000370819 FAM9AQ8IZU1 332 aaPredicted RBP12.11□□□□□ -0.47
COL21A1-203ENST00000370819 PELP1Q8IZL8 1130 aaKnown RBP12.06□□□□□ -0.48
COL21A1-203ENST00000370819 TTBK1Q5TCY1 1321 aaPredicted RBP12.02□□□□□ -0.49
COL21A1-203ENST00000370819 APLP2Q06481 763 aa11.94□□□□□ -0.5
COL21A1-203ENST00000370819 CENPBP07199 599 aaPredicted RBP11.86□□□□□ -0.51
COL21A1-203ENST00000370819 ZEB1P37275 1124 aaPredicted RBP11.85□□□□□ -0.51
COL21A1-203ENST00000370819 CCER1Q8TC90 406 aaPredicted RBP11.84□□□□□ -0.51
COL21A1-203ENST00000370819 TRIM41Q8WV44 630 aa11.81□□□□□ -0.52
COL21A1-203ENST00000370819 RANGAP1P46060 587 aaPredicted RBP11.75□□□□□ -0.53
COL21A1-203ENST00000370819 HRCP23327 699 aa11.72□□□□□ -0.53
COL21A1-203ENST00000370819 PPARGC1BQ86YN6 1023 aaKnown RBP11.7□□□□□ -0.54
COL21A1-203ENST00000370819 YTHDC1Q96MU7 727 aaKnown RBP11.69□□□□□ -0.54
COL21A1-203ENST00000370819 UBTFP17480 764 aaKnown RBP11.62□□□□□ -0.55
COL21A1-203ENST00000370819 TRIM26Q12899 539 aaPredicted RBP11.62□□□□□ -0.55
COL21A1-203ENST00000370819 ERICH6Q7L0X2 663 aa11.61□□□□□ -0.55
COL21A1-203ENST00000370819 LOC105371045A0A1W2PR82 267 aa11.59□□□□□ -0.55
COL21A1-203ENST00000370819 CHIC1Q5VXU3 224 aa11.54□□□□□ -0.56
COL21A1-203ENST00000370819 CCDC180Q9P1Z9 1646 aa11.54□□□□□ -0.56
COL21A1-203ENST00000370819 ATP1B4Q9UN42 357 aaPredicted RBP11.52□□□□□ -0.56
COL21A1-203ENST00000370819 MYT1Q01538 1121 aa11.5□□□□□ -0.57
COL21A1-203ENST00000370819 NEFLP07196 543 aa11.49□□□□□ -0.57
COL21A1-203ENST00000370819 HNRNPUL2Q1KMD3 747 aaKnown RBP11.34□□□□□ -0.59
COL21A1-203ENST00000370819 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.34□□□□□ -0.59
COL21A1-203ENST00000370819 ITGAEP38570 1179 aa11.32□□□□□ -0.6
COL21A1-203ENST00000370819 DIEXFQ68CQ4 756 aaKnown RBP11.28□□□□□ -0.6
COL21A1-203ENST00000370819 GTF3C3Q9Y5Q9 886 aa11.18□□□□□ -0.62
COL21A1-203ENST00000370819 CNGB1Q14028 1251 aaPredicted RBP11.17□□□□□ -0.62
COL21A1-203ENST00000370819 POLR3GLQ9BT43 218 aa11.16□□□□□ -0.62
COL21A1-203ENST00000370819 DAXXQ9UER7 740 aaPredicted RBP11.06□□□□□ -0.64
COL21A1-203ENST00000370819 BCANQ96GW7 911 aa11.05□□□□□ -0.64
COL21A1-203ENST00000370819 ACIN1Q9UKV3 1341 aaKnown RBP11.01□□□□□ -0.65
COL21A1-203ENST00000370819 ZNF316A6NFI3 1004 aaPredicted RBP10.98□□□□□ -0.65
COL21A1-203ENST00000370819 NEUROD1Q13562 356 aa10.97□□□□□ -0.65
COL21A1-203ENST00000370819 FAM50AQ14320 339 aaKnown RBP10.96□□□□□ -0.66
COL21A1-203ENST00000370819 RTL5Q5HYW3 569 aaPredicted RBP10.95□□□□□ -0.66
COL21A1-203ENST00000370819 ZCCHC6Q5VYS8 1495 aaKnown RBP10.91□□□□□ -0.66
COL21A1-203ENST00000370819 MYT1LQ9UL68 1186 aa10.88□□□□□ -0.67
COL21A1-203ENST00000370819 ANP32CO43423 234 aa10.86□□□□□ -0.67
COL21A1-203ENST00000370819 CLSPNQ9HAW4 1339 aa10.86□□□□□ -0.67
COL21A1-203ENST00000370819 DCAF1Q9Y4B6 1507 aa10.86□□□□□ -0.67
COL21A1-203ENST00000370819 TRIM52Q96A61 297 aa10.86□□□□□ -0.67
COL21A1-203ENST00000370819 CDK11AQ9UQ88 783 aaPredicted RBP10.84□□□□□ -0.67
COL21A1-203ENST00000370819 MYO15BQ96JP2 1530 aa10.82□□□□□ -0.68
COL21A1-203ENST00000370819 PABPN1Q86U42 306 aaKnown RBP eCLIP10.8□□□□□ -0.68
COL21A1-203ENST00000370819 SCAF1Q9H7N4 1312 aaKnown RBP10.8□□□□□ -0.68
COL21A1-203ENST00000370819 SLC4A1APQ9BWU0 796 aaKnown RBP10.79□□□□□ -0.68
COL21A1-203ENST00000370819 CSRNP3Q8WYN3 585 aa10.79□□□□□ -0.68
COL21A1-203ENST00000370819 ZNF326Q5BKZ1 582 aaKnown RBP10.79□□□□□ -0.68
COL21A1-203ENST00000370819 ABCC9O60706 1549 aa10.77□□□□□ -0.68
COL21A1-203ENST00000370819 FKBP8Q14318 412 aa10.74□□□□□ -0.69
COL21A1-203ENST00000370819 P3H3Q8IVL6 736 aa10.71□□□□□ -0.7
COL21A1-203ENST00000370819 NACADO15069 1562 aa10.7□□□□□ -0.7
COL21A1-203ENST00000370819 DDX10Q13206 875 aaKnown RBP10.68□□□□□ -0.7
COL21A1-203ENST00000370819 MIER1Q8N108 512 aa10.66□□□□□ -0.7
COL21A1-203ENST00000370819 ANP32AP39687 249 aaKnown RBP10.63□□□□□ -0.71
COL21A1-203ENST00000370819 HNRNPUQ00839 825 aaKnown RBP eCLIP10.63□□□□□ -0.71
COL21A1-203ENST00000370819 NPM2Q86SE8 214 aaKnown RBP10.63□□□□□ -0.71
COL21A1-203ENST00000370819 ARID3CA6NKF2 412 aa10.63□□□□□ -0.71
COL21A1-203ENST00000370819 RB1CC1Q8TDY2 1594 aa10.61□□□□□ -0.71
COL21A1-203ENST00000370819 BCL11AQ9H165 835 aa10.58□□□□□ -0.71
COL21A1-203ENST00000370819 FAM9BQ8IZU0 186 aa10.58□□□□□ -0.72
COL21A1-203ENST00000370819 TONSLQ96HA7 1378 aa10.56□□□□□ -0.72
COL21A1-203ENST00000370819 CANXP27824 592 aaKnown RBP10.55□□□□□ -0.72
COL21A1-203ENST00000370819 HIRIP3Q9BW71 556 aaPredicted RBP10.54□□□□□ -0.72
COL21A1-203ENST00000370819 EIF5BO60841 1220 aaKnown RBP10.54□□□□□ -0.72
COL21A1-203ENST00000370819 IRX6P78412 446 aaPredicted RBP10.53□□□□□ -0.72
COL21A1-203ENST00000370819 FBLN2P98095 1184 aa10.53□□□□□ -0.72
COL21A1-203ENST00000370819 SALL2Q9Y467 1007 aaPredicted RBP10.53□□□□□ -0.72
COL21A1-203ENST00000370819 NBR1Q14596 966 aa10.52□□□□□ -0.73
COL21A1-203ENST00000370819 ZNF777Q9ULD5 760 aaPredicted RBP10.51□□□□□ -0.73
COL21A1-203ENST00000370819 UNC13AQ9UPW8 1703 aa10.5□□□□□ -0.73
COL21A1-203ENST00000370819 ZBTB47Q9UFB7 747 aaPredicted RBP10.5□□□□□ -0.73
COL21A1-203ENST00000370819 CCDC136Q96JN2 1154 aa10.49□□□□□ -0.73
COL21A1-203ENST00000370819 CHIC2Q9UKJ5 165 aa10.46□□□□□ -0.74
COL21A1-203ENST00000370819 MRS2Q9HD23 443 aa10.46□□□□□ -0.74
COL21A1-203ENST00000370819 TMC1Q8TDI8 760 aa10.44□□□□□ -0.74
COL21A1-203ENST00000370819 PRKCSHP14314 528 aaPredicted RBP10.43□□□□□ -0.74
COL21A1-203ENST00000370819 SCRIBQ14160 1630 aa10.43□□□□□ -0.74
COL21A1-203ENST00000370819 CLIP1P30622 1438 aa10.4□□□□□ -0.74
COL21A1-203ENST00000370819 SLC24A1O60721 1099 aa10.39□□□□□ -0.75
COL21A1-203ENST00000370819 NEFMP07197 916 aa10.38□□□□□ -0.75
COL21A1-203ENST00000370819 ANP32EQ9BTT0 268 aa10.38□□□□□ -0.75
COL21A1-203ENST00000370819 SENP3-EIF4A1A0A087X0R7 540 aa10.38□□□□□ -0.75
COL21A1-203ENST00000370819 ARXQ96QS3 562 aa10.37□□□□□ -0.75
COL21A1-203ENST00000370819 CEP162Q5TB80 1403 aa10.37□□□□□ -0.75
COL21A1-203ENST00000370819 HSP90AA1P07900 732 aaKnown RBP10.36□□□□□ -0.75
COL21A1-203ENST00000370819 BICRAQ9NZM4 1560 aa10.35□□□□□ -0.75
COL21A1-203ENST00000370819 SUPT16HQ9Y5B9 1047 aaKnown RBP10.35□□□□□ -0.75
COL21A1-203ENST00000370819 UPF2Q9HAU5 1272 aaKnown RBP10.35□□□□□ -0.75
COL21A1-203ENST00000370819 KDM2AQ9Y2K7 1162 aa10.35□□□□□ -0.75
COL21A1-203ENST00000370819 EIF4G2P78344 907 aaKnown RBP eCLIP10.34□□□□□ -0.75
COL21A1-203ENST00000370819 RSF1Q96T23 1441 aaPredicted RBP10.32□□□□□ -0.76
COL21A1-203ENST00000370819 ANP32BQ92688 251 aaKnown RBP10.31□□□□□ -0.76
COL21A1-203ENST00000370819 RRP7BPQ9NSQ0 103 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms