RNA–Protein interactions for RNA: ENST00000293373.10

NCKAP1L-201, Transcript of NCK associated protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1L, Length 9,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-201ENST00000293373 NISCHQ9Y2I1 1504 aa14.33□□□□□ -0.11
NCKAP1L-201ENST00000293373 DCAF8L2P0C7V8 631 aa14□□□□□ -0.17
NCKAP1L-201ENST00000293373 SUPT5HO00267 1087 aaKnown RBP13.09□□□□□ -0.31
NCKAP1L-201ENST00000293373 SHROOM4Q9ULL8 1493 aa13.06□□□□□ -0.32
NCKAP1L-201ENST00000293373 FAM9AQ8IZU1 332 aaPredicted RBP12.58□□□□□ -0.4
NCKAP1L-201ENST00000293373 APLP2Q06481 763 aa12.49□□□□□ -0.41
NCKAP1L-201ENST00000293373 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
NCKAP1L-201ENST00000293373 ABCC9O60706 1549 aa12.32□□□□□ -0.44
NCKAP1L-201ENST00000293373 TRIM41Q8WV44 630 aa12.3□□□□□ -0.44
NCKAP1L-201ENST00000293373 CCDC180Q9P1Z9 1646 aa12.08□□□□□ -0.48
NCKAP1L-201ENST00000293373 UBTFP17480 764 aaKnown RBP12.08□□□□□ -0.48
NCKAP1L-201ENST00000293373 RANGAP1P46060 587 aaPredicted RBP12.05□□□□□ -0.48
NCKAP1L-201ENST00000293373 PABPN1Q86U42 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
NCKAP1L-201ENST00000293373 ATP1B4Q9UN42 357 aaPredicted RBP11.99□□□□□ -0.49
NCKAP1L-201ENST00000293373 TTBK1Q5TCY1 1321 aaPredicted RBP11.94□□□□□ -0.5
NCKAP1L-201ENST00000293373 ZCCHC6Q5VYS8 1495 aaKnown RBP11.92□□□□□ -0.5
NCKAP1L-201ENST00000293373 ZEB1P37275 1124 aaPredicted RBP11.83□□□□□ -0.51
NCKAP1L-201ENST00000293373 PELP1Q8IZL8 1130 aaKnown RBP11.81□□□□□ -0.52
NCKAP1L-201ENST00000293373 PCGF6Q9BYE7 350 aa11.8□□□□□ -0.52
NCKAP1L-201ENST00000293373 RB1CC1Q8TDY2 1594 aa11.8□□□□□ -0.52
NCKAP1L-201ENST00000293373 SCRIBQ14160 1630 aa11.8□□□□□ -0.52
NCKAP1L-201ENST00000293373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.76□□□□□ -0.53
NCKAP1L-201ENST00000293373 HNRNPUL2Q1KMD3 747 aaKnown RBP11.76□□□□□ -0.53
NCKAP1L-201ENST00000293373 CHIC1Q5VXU3 224 aa11.74□□□□□ -0.53
NCKAP1L-201ENST00000293373 CCER1Q8TC90 406 aaPredicted RBP11.73□□□□□ -0.53
NCKAP1L-201ENST00000293373 NACADO15069 1562 aa11.69□□□□□ -0.54
NCKAP1L-201ENST00000293373 MYT1LQ9UL68 1186 aa11.65□□□□□ -0.54
NCKAP1L-201ENST00000293373 TRIM26Q12899 539 aaPredicted RBP11.58□□□□□ -0.56
NCKAP1L-201ENST00000293373 DCAF1Q9Y4B6 1507 aa11.53□□□□□ -0.56
NCKAP1L-201ENST00000293373 FBLN2P98095 1184 aa11.51□□□□□ -0.57
NCKAP1L-201ENST00000293373 PPARGC1BQ86YN6 1023 aaKnown RBP11.49□□□□□ -0.57
NCKAP1L-201ENST00000293373 ITGAEP38570 1179 aa11.49□□□□□ -0.57
NCKAP1L-201ENST00000293373 CENPBP07199 599 aaPredicted RBP11.48□□□□□ -0.57
NCKAP1L-201ENST00000293373 LOC105371045A0A1W2PR82 267 aa11.47□□□□□ -0.57
NCKAP1L-201ENST00000293373 CSRNP3Q8WYN3 585 aa11.42□□□□□ -0.58
NCKAP1L-201ENST00000293373 BAZ1BQ9UIG0 1483 aaKnown RBP11.39□□□□□ -0.59
NCKAP1L-201ENST00000293373 FAM50AQ14320 339 aaKnown RBP11.38□□□□□ -0.59
NCKAP1L-201ENST00000293373 CDK11AQ9UQ88 783 aaPredicted RBP11.37□□□□□ -0.59
NCKAP1L-201ENST00000293373 BAZ1AQ9NRL2 1556 aaPredicted RBP11.33□□□□□ -0.6
NCKAP1L-201ENST00000293373 RSF1Q96T23 1441 aaPredicted RBP11.32□□□□□ -0.6
NCKAP1L-201ENST00000293373 MYO15BQ96JP2 1530 aa11.32□□□□□ -0.6
NCKAP1L-201ENST00000293373 NEFLP07196 543 aa11.3□□□□□ -0.6
NCKAP1L-201ENST00000293373 TRIM52Q96A61 297 aa11.3□□□□□ -0.6
NCKAP1L-201ENST00000293373 NPM1P06748 294 aaKnown RBP eCLIP11.25□□□□□ -0.61
NCKAP1L-201ENST00000293373 POLR3GLQ9BT43 218 aa11.24□□□□□ -0.61
NCKAP1L-201ENST00000293373 EEA1Q15075 1411 aa11.24□□□□□ -0.61
NCKAP1L-201ENST00000293373 P3H3Q8IVL6 736 aa11.23□□□□□ -0.61
NCKAP1L-201ENST00000293373 CHMP7Q8WUX9 453 aaPredicted RBP11.22□□□□□ -0.61
NCKAP1L-201ENST00000293373 ERCC6Q03468 1493 aa11.21□□□□□ -0.61
NCKAP1L-201ENST00000293373 WRNQ14191 1432 aaPredicted RBP eCLIP11.19□□□□□ -0.62
NCKAP1L-201ENST00000293373 SMARCA2P51531 1590 aa11.18□□□□□ -0.62
NCKAP1L-201ENST00000293373 ARID3CA6NKF2 412 aa11.18□□□□□ -0.62
NCKAP1L-201ENST00000293373 HRCP23327 699 aa11.17□□□□□ -0.62
NCKAP1L-201ENST00000293373 YTHDC1Q96MU7 727 aaKnown RBP11.16□□□□□ -0.62
NCKAP1L-201ENST00000293373 ZNF777Q9ULD5 760 aaPredicted RBP11.16□□□□□ -0.62
NCKAP1L-201ENST00000293373 ESF1Q9H501 851 aaKnown RBP11.14□□□□□ -0.63
NCKAP1L-201ENST00000293373 SLC4A1APQ9BWU0 796 aaKnown RBP11.14□□□□□ -0.63
NCKAP1L-201ENST00000293373 KIF27Q86VH2 1401 aa11.13□□□□□ -0.63
NCKAP1L-201ENST00000293373 GOLGA3Q08378 1498 aa11.11□□□□□ -0.63
NCKAP1L-201ENST00000293373 ERICH6Q7L0X2 663 aa11.11□□□□□ -0.63
NCKAP1L-201ENST00000293373 CECR2Q9BXF3 1484 aa11.1□□□□□ -0.63
NCKAP1L-201ENST00000293373 CLIP1P30622 1438 aa11.09□□□□□ -0.63
NCKAP1L-201ENST00000293373 NEUROD1Q13562 356 aa11.08□□□□□ -0.64
NCKAP1L-201ENST00000293373 ZNF326Q5BKZ1 582 aaKnown RBP11.07□□□□□ -0.64
NCKAP1L-201ENST00000293373 PDS5BQ9NTI5 1447 aa11.06□□□□□ -0.64
NCKAP1L-201ENST00000293373 MTUS2Q5JR59 1369 aa11.04□□□□□ -0.64
NCKAP1L-201ENST00000293373 CEP164Q9UPV0 1460 aa11.04□□□□□ -0.64
NCKAP1L-201ENST00000293373 MYT1Q01538 1121 aa11.03□□□□□ -0.64
NCKAP1L-201ENST00000293373 BCANQ96GW7 911 aa11.03□□□□□ -0.64
NCKAP1L-201ENST00000293373 ACIN1Q9UKV3 1341 aaKnown RBP11.02□□□□□ -0.64
NCKAP1L-201ENST00000293373 TOP2AP11388 1531 aaKnown RBP11□□□□□ -0.65
NCKAP1L-201ENST00000293373 MROH2BQ7Z745 1585 aa11□□□□□ -0.65
NCKAP1L-201ENST00000293373 TSPY4P0CV99 314 aa10.98□□□□□ -0.65
NCKAP1L-201ENST00000293373 TSPY10P0CW01 314 aa10.98□□□□□ -0.65
NCKAP1L-201ENST00000293373 PLEKHD1A6NEE1 506 aa10.98□□□□□ -0.65
NCKAP1L-201ENST00000293373 STAG3Q9UJ98 1225 aa10.97□□□□□ -0.65
NCKAP1L-201ENST00000293373 CCDC88BA6NC98 1476 aa10.96□□□□□ -0.66
NCKAP1L-201ENST00000293373 TNIKQ9UKE5 1360 aa10.96□□□□□ -0.66
NCKAP1L-201ENST00000293373 CNGB1Q14028 1251 aaPredicted RBP10.95□□□□□ -0.66
NCKAP1L-201ENST00000293373 CEP162Q5TB80 1403 aa10.95□□□□□ -0.66
NCKAP1L-201ENST00000293373 CUX2O14529 1486 aa10.94□□□□□ -0.66
NCKAP1L-201ENST00000293373 TONSLQ96HA7 1378 aa10.93□□□□□ -0.66
NCKAP1L-201ENST00000293373 ANP32CO43423 234 aa10.93□□□□□ -0.66
NCKAP1L-201ENST00000293373 DIEXFQ68CQ4 756 aaKnown RBP10.93□□□□□ -0.66
NCKAP1L-201ENST00000293373 CADPSQ9ULU8 1353 aa10.92□□□□□ -0.66
NCKAP1L-201ENST00000293373 NEFMP07197 916 aa10.91□□□□□ -0.66
NCKAP1L-201ENST00000293373 ATAD2BQ9ULI0 1458 aa10.9□□□□□ -0.66
NCKAP1L-201ENST00000293373 CARMIL1Q5VZK9 1371 aa10.9□□□□□ -0.66
NCKAP1L-201ENST00000293373 SMARCA4P51532 1647 aa10.9□□□□□ -0.67
NCKAP1L-201ENST00000293373 DAXXQ9UER7 740 aaPredicted RBP10.89□□□□□ -0.67
NCKAP1L-201ENST00000293373 FHAD1B1AJZ9 1412 aa10.89□□□□□ -0.67
NCKAP1L-201ENST00000293373 EIF4G1Q04637 1599 aaKnown RBP10.88□□□□□ -0.67
NCKAP1L-201ENST00000293373 CHGAP10645 457 aaKnown RBP10.87□□□□□ -0.67
NCKAP1L-201ENST00000293373 CHIC2Q9UKJ5 165 aa10.87□□□□□ -0.67
NCKAP1L-201ENST00000293373 KCNH8Q96L42 1107 aa10.86□□□□□ -0.67
NCKAP1L-201ENST00000293373 CARMIL2Q6F5E8 1435 aa10.85□□□□□ -0.67
NCKAP1L-201ENST00000293373 SOGA1O94964 1423 aa10.85□□□□□ -0.67
NCKAP1L-201ENST00000293373 ZNF316A6NFI3 1004 aaPredicted RBP10.85□□□□□ -0.67
NCKAP1L-201ENST00000293373 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.85□□□□□ -0.67
NCKAP1L-201ENST00000293373 CFDP1Q9UEE9 299 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms