RNA–Protein interactions for RNA: ENST00000411058.1

RNU4-22P-201, Transcript of RNA, U4 small nuclear 22, pseudogene, humanhuman

BASIC

Gene RNU4-22P, Length 166 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-22P-201ENST00000411058 AEBP2Q6ZN18 517 aaPredicted RBP24.15■■□□□ 1.46
RNU4-22P-201ENST00000411058 CHIC1Q5VXU3 224 aa23.72■■□□□ 1.39
RNU4-22P-201ENST00000411058 PHF23Q9BUL5 403 aaPredicted RBP20.8■□□□□ 0.92
RNU4-22P-201ENST00000411058 SENP3Q9H4L4 574 aaPredicted RBP20.59■□□□□ 0.89
RNU4-22P-201ENST00000411058 PLPPR3Q6T4P5 718 aa19.34■□□□□ 0.69
RNU4-22P-201ENST00000411058 FOXD1Q16676 465 aa19.03■□□□□ 0.64
RNU4-22P-201ENST00000411058 ADRA2BP18089 450 aa18.36■□□□□ 0.53
RNU4-22P-201ENST00000411058 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.52
RNU4-22P-201ENST00000411058 PIAS4Q8N2W9 510 aaPredicted RBP18.03■□□□□ 0.48
RNU4-22P-201ENST00000411058 MSH5O43196 834 aa17.62■□□□□ 0.41
RNU4-22P-201ENST00000411058 PPP4R3CPQ6ZMV5 832 aa17.02■□□□□ 0.32
RNU4-22P-201ENST00000411058 SCAF1Q9H7N4 1312 aaKnown RBP16.92■□□□□ 0.3
RNU4-22P-201ENST00000411058 KCNA4P22459 653 aa16.67■□□□□ 0.26
RNU4-22P-201ENST00000411058 NCBP3Q53F19 620 aaKnown RBP16.67■□□□□ 0.26
RNU4-22P-201ENST00000411058 MAPK8IP2Q13387 824 aaPredicted RBP16.62■□□□□ 0.25
RNU4-22P-201ENST00000411058 CNKSR2Q8WXI2 1034 aa16.55■□□□□ 0.24
RNU4-22P-201ENST00000411058 DMRT2Q9Y5R5 561 aa16.41■□□□□ 0.22
RNU4-22P-201ENST00000411058 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
RNU4-22P-201ENST00000411058 RNF216Q9NWF9 866 aaPredicted RBP16.2■□□□□ 0.18
RNU4-22P-201ENST00000411058 HOXD11P31277 338 aaPredicted RBP16.08■□□□□ 0.16
RNU4-22P-201ENST00000411058 SLC4A1APQ9BWU0 796 aaKnown RBP15.95■□□□□ 0.14
RNU4-22P-201ENST00000411058 POTEDQ86YR6 584 aa15.85■□□□□ 0.13
RNU4-22P-201ENST00000411058 DNAJC5BQ9UF47 199 aa15.83■□□□□ 0.12
RNU4-22P-201ENST00000411058 DCAF8L1A6NGE4 600 aa15.78■□□□□ 0.12
RNU4-22P-201ENST00000411058 EHMT2Q96KQ7 1210 aa15.57■□□□□ 0.08
RNU4-22P-201ENST00000411058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.41■□□□□ 0.06
RNU4-22P-201ENST00000411058 FOXD4L1Q9NU39 408 aa15.38■□□□□ 0.05
RNU4-22P-201ENST00000411058 SLC4A2P04920 1241 aa15.37■□□□□ 0.05
RNU4-22P-201ENST00000411058 ZBTB22O15209 634 aa15.3■□□□□ 0.04
RNU4-22P-201ENST00000411058 CSRNP3Q8WYN3 585 aa15.29■□□□□ 0.04
RNU4-22P-201ENST00000411058 MYCNP04198 464 aaPredicted RBP15.15■□□□□ 0.02
RNU4-22P-201ENST00000411058 U3KPZ7 1027 aaPredicted RBP15.09■□□□□ 0.01
RNU4-22P-201ENST00000411058 RNF39Q9H2S5 420 aa15.04■□□□□ -0
RNU4-22P-201ENST00000411058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.03■□□□□ -0
RNU4-22P-201ENST00000411058 HNRNPUL2Q1KMD3 747 aaKnown RBP15.03■□□□□ -0
RNU4-22P-201ENST00000411058 SAMD1Q6SPF0 538 aaPredicted RBP14.96□□□□□ -0.01
RNU4-22P-201ENST00000411058 C1QBPQ07021 282 aaKnown RBP14.91□□□□□ -0.02
RNU4-22P-201ENST00000411058 APLP2Q06481 763 aa14.9□□□□□ -0.02
RNU4-22P-201ENST00000411058 ATXN8OSP0DMR3 200 aa14.84□□□□□ -0.03
RNU4-22P-201ENST00000411058 CAPN15O75808 1086 aa14.67□□□□□ -0.06
RNU4-22P-201ENST00000411058 CACNB1Q02641 598 aaPredicted RBP14.66□□□□□ -0.06
RNU4-22P-201ENST00000411058 SPINK5Q9NQ38 1064 aaPredicted RBP14.65□□□□□ -0.06
RNU4-22P-201ENST00000411058 ATF5Q9Y2D1 282 aaPredicted RBP14.64□□□□□ -0.07
RNU4-22P-201ENST00000411058 ZNF219Q9P2Y4 722 aaPredicted RBP14.63□□□□□ -0.07
RNU4-22P-201ENST00000411058 TRHP20396 242 aaPredicted RBP14.6□□□□□ -0.07
RNU4-22P-201ENST00000411058 ABCB7O75027 752 aa14.35□□□□□ -0.11
RNU4-22P-201ENST00000411058 POLA2Q14181 598 aa14.34□□□□□ -0.11
RNU4-22P-201ENST00000411058 DSG3P32926 999 aa14.33□□□□□ -0.12
RNU4-22P-201ENST00000411058 ZBTB12Q9Y330 459 aaPredicted RBP14.19□□□□□ -0.14
RNU4-22P-201ENST00000411058 FBLN2P98095 1184 aa14.16□□□□□ -0.14
RNU4-22P-201ENST00000411058 MKRN4PQ13434 485 aaPredicted RBP14.02□□□□□ -0.17
RNU4-22P-201ENST00000411058 FKBP8Q14318 412 aa13.89□□□□□ -0.19
RNU4-22P-201ENST00000411058 OSCARQ8IYS5 282 aa13.86□□□□□ -0.19
RNU4-22P-201ENST00000411058 SPDYE4A6NLX3 237 aa13.81□□□□□ -0.2
RNU4-22P-201ENST00000411058 SPDYE2BA6NHP3 402 aa13.77□□□□□ -0.21
RNU4-22P-201ENST00000411058 SPDYE6P0CI01 402 aa13.77□□□□□ -0.21
RNU4-22P-201ENST00000411058 SPDYE2Q495Y8 402 aa13.77□□□□□ -0.21
RNU4-22P-201ENST00000411058 RBM42Q9BTD8 480 aaKnown RBP13.75□□□□□ -0.21
RNU4-22P-201ENST00000411058 ZNF692Q9BU19 519 aaPredicted RBP13.73□□□□□ -0.21
RNU4-22P-201ENST00000411058 SSUH2Q9Y2M2 353 aa13.63□□□□□ -0.23
RNU4-22P-201ENST00000411058 AKT1S1Q96B36 256 aa13.55□□□□□ -0.24
RNU4-22P-201ENST00000411058 PABPN1Q86U42 306 aaKnown RBP eCLIP13.53□□□□□ -0.24
RNU4-22P-201ENST00000411058 PROM2Q8N271 834 aa13.53□□□□□ -0.24
RNU4-22P-201ENST00000411058 FBXO3Q9UK99 471 aa13.44□□□□□ -0.26
RNU4-22P-201ENST00000411058 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
RNU4-22P-201ENST00000411058 STAG3Q9UJ98 1225 aa13.38□□□□□ -0.27
RNU4-22P-201ENST00000411058 SPDYE1Q8NFV5 336 aaPredicted RBP13.37□□□□□ -0.27
RNU4-22P-201ENST00000411058 CLEC11AQ9Y240 323 aa13.3□□□□□ -0.28
RNU4-22P-201ENST00000411058 PITPNM1O00562 1244 aa13.23□□□□□ -0.29
RNU4-22P-201ENST00000411058 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
RNU4-22P-201ENST00000411058 VASPP50552 380 aaPredicted RBP13.19□□□□□ -0.3
RNU4-22P-201ENST00000411058 PLEKHG5O94827 1062 aa13.13□□□□□ -0.31
RNU4-22P-201ENST00000411058 PLCD3Q8N3E9 789 aa13.13□□□□□ -0.31
RNU4-22P-201ENST00000411058 MIER1Q8N108 512 aa13.12□□□□□ -0.31
RNU4-22P-201ENST00000411058 CHRDL2Q6WN34 429 aa13.1□□□□□ -0.31
RNU4-22P-201ENST00000411058 KLHL34Q8N239 644 aa13.01□□□□□ -0.33
RNU4-22P-201ENST00000411058 ZBTB47Q9UFB7 747 aaPredicted RBP13.01□□□□□ -0.33
RNU4-22P-201ENST00000411058 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
RNU4-22P-201ENST00000411058 IFNLR1Q8IU57 520 aaPredicted RBP12.97□□□□□ -0.33
RNU4-22P-201ENST00000411058 FXR2P51116 673 aaKnown RBP eCLIP12.96□□□□□ -0.33
RNU4-22P-201ENST00000411058 PRKAR2AP13861 404 aaKnown RBP12.93□□□□□ -0.34
RNU4-22P-201ENST00000411058 CHADLQ6NUI6 762 aa12.92□□□□□ -0.34
RNU4-22P-201ENST00000411058 PIP4P2Q8N4L2 257 aa12.92□□□□□ -0.34
RNU4-22P-201ENST00000411058 SPOCK2Q92563 424 aa12.87□□□□□ -0.35
RNU4-22P-201ENST00000411058 NPM1P06748 294 aaKnown RBP eCLIP12.86□□□□□ -0.35
RNU4-22P-201ENST00000411058 FARP1Q9Y4F1 1045 aaPredicted RBP12.82□□□□□ -0.36
RNU4-22P-201ENST00000411058 MNX1P50219 401 aaPredicted RBP12.81□□□□□ -0.36
RNU4-22P-201ENST00000411058 AMER1Q5JTC6 1135 aaPredicted RBP12.81□□□□□ -0.36
RNU4-22P-201ENST00000411058 NUBP1P53384 320 aa12.7□□□□□ -0.38
RNU4-22P-201ENST00000411058 FAM212AQ96EL1 285 aa12.69□□□□□ -0.38
RNU4-22P-201ENST00000411058 RTN4Q9NQC3 1192 aaKnown RBP12.69□□□□□ -0.38
RNU4-22P-201ENST00000411058 CIZ1Q9ULV3 898 aaPredicted RBP12.68□□□□□ -0.38
RNU4-22P-201ENST00000411058 GSE1Q14687 1217 aa12.67□□□□□ -0.38
RNU4-22P-201ENST00000411058 DCAF8Q5TAQ9 597 aa12.66□□□□□ -0.38
RNU4-22P-201ENST00000411058 PAK3O75914 559 aaPredicted RBP12.65□□□□□ -0.38
RNU4-22P-201ENST00000411058 RASEFQ8IZ41 740 aa12.65□□□□□ -0.38
RNU4-22P-201ENST00000411058 POTEHQ6S545 545 aa12.6□□□□□ -0.39
RNU4-22P-201ENST00000411058 TSPYL2Q9H2G4 693 aaPredicted RBP12.6□□□□□ -0.39
RNU4-22P-201ENST00000411058 CD44P16070 742 aaKnown RBP12.58□□□□□ -0.4
RNU4-22P-201ENST00000411058 TRIM41Q8WV44 630 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms