Protein–RNA interactions for Protein: Q6ZV60

LINC00173, Putative uncharacterized protein encoded by LINC00173, humanhuman

Predictions only

Length 143 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173Q6ZV60 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00173Q6ZV60 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00173Q6ZV60 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00173Q6ZV60 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00173Q6ZV60 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00173Q6ZV60 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00173Q6ZV60 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00173Q6ZV60 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 BICD1-207ENST00000551848 1962 ntBASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 WIZP1-201ENST00000531444 2299 ntBASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 UNC93B8-201ENST00000511903 705 ntBASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 AC055733.4-201ENST00000638462 1354 ntBASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC00173Q6ZV60 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00173Q6ZV60 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00173Q6ZV60 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00173Q6ZV60 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00173Q6ZV60 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00173Q6ZV60 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00173Q6ZV60 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00173Q6ZV60 AP005435.1-201ENST00000529293 1178 ntBASIC14.28□□□□□ -0.12
LINC00173Q6ZV60 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC00173Q6ZV60 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00173Q6ZV60 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00173Q6ZV60 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00173Q6ZV60 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
LINC00173Q6ZV60 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC00173Q6ZV60 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC00173Q6ZV60 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00173Q6ZV60 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC00173Q6ZV60 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
LINC00173Q6ZV60 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00173Q6ZV60 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00173Q6ZV60 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00173Q6ZV60 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00173Q6ZV60 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00173Q6ZV60 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LINC00173Q6ZV60 DPP3P2-201ENST00000416030 1696 ntBASIC14.27□□□□□ -0.12
LINC00173Q6ZV60 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.27□□□□□ -0.12
LINC00173Q6ZV60 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00173Q6ZV60 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00173Q6ZV60 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC00173Q6ZV60 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LINC00173Q6ZV60 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00173Q6ZV60 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00173Q6ZV60 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
LINC00173Q6ZV60 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.26□□□□□ -0.13
LINC00173Q6ZV60 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00173Q6ZV60 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINC00173Q6ZV60 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms