Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.877e-7■■■■□ 21.4
MATR3P43243 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.687e-7■■■■□ 21.4
MATR3P43243 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.221e-6■■■■□ 21.3
MATR3P43243 SPTBN1-203ENST00000389980 2164 ntTSL 1 (best)13.28□□□□□ -0.281e-6■■■■□ 21.3
MATR3P43243 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC10.51□□□□□ -0.731e-6■■■■□ 21.3
MATR3P43243 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC16.53■□□□□ 0.242e-6■■■■□ 21.3
MATR3P43243 PDE4D-206ENST00000405053 512 ntTSL 511.78□□□□□ -0.522e-6■■■■□ 21.3
MATR3P43243 PDE4D-201ENST00000309641 2025 ntTSL 1 (best)9.95□□□□□ -0.822e-6■■■■□ 21.3
MATR3P43243 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.282e-6■■■■□ 21.3
MATR3P43243 DLG1-219ENST00000456699 629 ntTSL 39.28□□□□□ -0.929e-7■■■■□ 21.3
MATR3P43243 DLG1-203ENST00000392380 716 ntTSL 34.65□□□□□ -1.679e-7■■■■□ 21.3
MATR3P43243 TNS3-207ENST00000450444 1832 ntTSL 514.09□□□□□ -0.152e-6■■■■□ 21.3
MATR3P43243 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.342e-6■■■■□ 21.3
MATR3P43243 TNS3-208ENST00000457718 3836 ntTSL 512.48□□□□□ -0.412e-6■■■■□ 21.3
MATR3P43243 LINC00534-204ENST00000524361 620 ntTSL 36.76□□□□□ -1.331e-6■■■■□ 21.3
MATR3P43243 MTAP-206ENST00000577563 339 ntTSL 1 (best)4.62□□□□□ -1.673e-6■■■■□ 21.3
MATR3P43243 ARHGEF28-207ENST00000506334 536 ntTSL 48.45□□□□□ -1.062e-6■■■■□ 21.3
MATR3P43243 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.891e-6■■■■□ 21.3
MATR3P43243 NOS1AP-202ENST00000430120 1732 ntTSL 1 (best)18.17■□□□□ 0.51e-6■■■■□ 21.3
MATR3P43243 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.361e-6■■■■□ 21.3
MATR3P43243 PRKCB-210ENST00000498739 569 ntTSL 418.37■□□□□ 0.532e-6■■■■□ 21.3
MATR3P43243 PAWR-208ENST00000550006 493 ntTSL 321.24■□□□□ 0.991e-6■■■■□ 21.3
MATR3P43243 COG5-209ENST00000484237 574 ntTSL 46.07□□□□□ -1.441e-6■■■■□ 21.3
MATR3P43243 ANO10-212ENST00000448045 583 ntTSL 38.52□□□□□ -1.051e-6■■■■□ 21.3
MATR3P43243 SUPT3H-205ENST00000475057 1377 ntTSL 28.08□□□□□ -1.125e-7■■■■□ 21.3
MATR3P43243 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.55e-7■■■■□ 21.3
MATR3P43243 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.575e-7■■■■□ 21.3
MATR3P43243 TRMT11-203ENST00000444121 617 ntTSL 217.96■□□□□ 0.478e-7■■■■□ 21.3
MATR3P43243 TRMT11-205ENST00000461129 758 ntTSL 517.24■□□□□ 0.358e-7■■■■□ 21.3
MATR3P43243 TRMT11-204ENST00000446681 657 ntTSL 315.1■□□□□ 0.018e-7■■■■□ 21.3
MATR3P43243 TRMT11-208ENST00000473273 258 ntTSL 58.57□□□□□ -1.048e-7■■■■□ 21.3
MATR3P43243 TRMT11-210ENST00000489934 418 ntTSL 54.26□□□□□ -1.738e-7■■■■□ 21.3
MATR3P43243 DLEU1-205ENST00000463357 274 ntTSL 1 (best)6.33□□□□□ -1.46e-7■■■■□ 21.3
MATR3P43243 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.14□□□□□ -1.918e-7■■■■□ 21.3
MATR3P43243 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.01■□□□□ 0.157e-7■■■■□ 21.3
MATR3P43243 SDCBP2-AS1-203ENST00000609285 561 ntTSL 414.66□□□□□ -0.067e-7■■■■□ 21.3
MATR3P43243 SDCBP2-AS1-204ENST00000609470 2158 ntTSL 1 (best) BASIC12.88□□□□□ -0.357e-7■■■■□ 21.3
MATR3P43243 SDCBP2-AS1-202ENST00000607947 808 ntTSL 3 BASIC10.32□□□□□ -0.767e-7■■■■□ 21.3
MATR3P43243 DLX6-AS1-203ENST00000431497 4382 ntTSL 214.03□□□□□ -0.161e-6■■■■□ 21.2
MATR3P43243 DLX6-AS1-204ENST00000437331 3851 ntTSL 36.27□□□□□ -1.411e-6■■■■□ 21.2
MATR3P43243 DLX6-AS1-202ENST00000430404 1158 ntTSL 45.85□□□□□ -1.471e-6■■■■□ 21.2
MATR3P43243 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.74□□□□□ -1.491e-6■■■■□ 21.2
MATR3P43243 DLX6-AS1-206ENST00000452769 3825 ntTSL 25.63□□□□□ -1.511e-6■■■■□ 21.2
MATR3P43243 DLX6-AS1-208ENST00000605417 4172 ntTSL 54.49□□□□□ -1.691e-6■■■■□ 21.2
MATR3P43243 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.05■■□□□ 1.444e-6■■■■□ 21.2
MATR3P43243 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.89■□□□□ 0.934e-6■■■■□ 21.2
MATR3P43243 ACP1-208ENST00000442386 546 ntTSL 420.89■□□□□ 0.934e-6■■■■□ 21.2
MATR3P43243 ACP1-202ENST00000272067 1552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.324e-6■■■■□ 21.2
MATR3P43243 ACP1-206ENST00000413140 689 ntTSL 212.38□□□□□ -0.434e-6■■■■□ 21.2
MATR3P43243 ACP1-204ENST00000405364 414 ntTSL 512.33□□□□□ -0.444e-6■■■■□ 21.2
MATR3P43243 ACP1-207ENST00000439645 605 ntTSL 2 BASIC12.15□□□□□ -0.464e-6■■■■□ 21.2
MATR3P43243 ACP1-209ENST00000453390 577 ntTSL 1 (best)12.15□□□□□ -0.464e-6■■■■□ 21.2
MATR3P43243 ACP1-211ENST00000480874 732 ntTSL 211.33□□□□□ -0.64e-6■■■■□ 21.2
MATR3P43243 ACP1-203ENST00000405233 1149 ntTSL 1 (best) BASIC9.75□□□□□ -0.854e-6■■■■□ 21.2
MATR3P43243 ACP1-213ENST00000484464 573 ntTSL 49.12□□□□□ -0.954e-6■■■■□ 21.2
MATR3P43243 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.072e-6■■■■□ 21.2
MATR3P43243 SIRT7-210ENST00000572902 909 ntTSL 323.56■■□□□ 1.369e-7■■■■□ 21.2
MATR3P43243 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.079e-7■■■■□ 21.2
MATR3P43243 GRB10-202ENST00000357271 2050 ntTSL 1 (best) BASIC13.89□□□□□ -0.193e-6■■■■□ 21.2
MATR3P43243 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.693e-6■■■■□ 21.2
MATR3P43243 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC9.62□□□□□ -0.873e-6■■■■□ 21.2
MATR3P43243 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.933e-6■■■■□ 21.2
MATR3P43243 GRB10-210ENST00000407526 2279 ntTSL 1 (best) BASIC12.71□□□□□ -0.373e-6■■■■□ 21.2
MATR3P43243 GRB10-209ENST00000406641 2700 ntTSL 5 BASIC10.28□□□□□ -0.763e-6■■■■□ 21.2
MATR3P43243 EIPR1-212ENST00000478754 2932 ntTSL 518.26■□□□□ 0.517e-7■■■■□ 21.2
MATR3P43243 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.052e-6■■■■□ 21.2
MATR3P43243 EDRF1-208ENST00000481600 4181 ntTSL 213.26□□□□□ -0.292e-6■■■■□ 21.2
MATR3P43243 EDRF1-206ENST00000419769 4243 ntTSL 1 (best)13.04□□□□□ -0.322e-6■■■■□ 21.2
MATR3P43243 EDRF1-202ENST00000356792 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.482e-6■■■■□ 21.2
MATR3P43243 EDRF1-205ENST00000368815 4123 ntTSL 1 (best)12.08□□□□□ -0.482e-6■■■■□ 21.2
MATR3P43243 EDRF1-210ENST00000525358 436 ntTSL 312.03□□□□□ -0.482e-6■■■■□ 21.2
MATR3P43243 EDRF1-203ENST00000368812 1380 ntTSL 1 (best)11.66□□□□□ -0.542e-6■■■■□ 21.2
MATR3P43243 EDRF1-212ENST00000527655 851 ntTSL 34.24□□□□□ -1.732e-6■■■■□ 21.2
MATR3P43243 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.477e-8■■■■□ 21.2
MATR3P43243 ASCC3-201ENST00000324696 3618 ntTSL 214.57□□□□□ -0.081e-6■■■■□ 21.2
MATR3P43243 ASCC3-204ENST00000369162 8146 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.371e-6■■■■□ 21.2
MATR3P43243 FBXW7-212ENST00000604872 970 ntTSL 1 (best) BASIC10.62□□□□□ -0.717e-8■■■■□ 21.2
MATR3P43243 FBXW7-205ENST00000603548 2562 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.747e-8■■■■□ 21.2
MATR3P43243 KLHL18-202ENST00000433449 560 ntTSL 420.15■□□□□ 0.821e-6■■■■□ 21.2
MATR3P43243 KLHL18-203ENST00000437353 463 ntTSL 219.48■□□□□ 0.711e-6■■■■□ 21.2
MATR3P43243 KLHL18-204ENST00000442272 2249 ntTSL 214.94□□□□□ -0.021e-6■■■■□ 21.2
MATR3P43243 KLHL18-205ENST00000461084 3206 ntTSL 212.27□□□□□ -0.451e-6■■■■□ 21.2
MATR3P43243 KLHL18-201ENST00000232766 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.521e-6■■■■□ 21.2
MATR3P43243 TLK1-209ENST00000470340 521 ntTSL 46.3□□□□□ -1.49e-7■■■■□ 21.2
MATR3P43243 SGMS1-208ENST00000608287 542 ntTSL 420.91■□□□□ 0.945e-7■■■■□ 21.2
MATR3P43243 EDA-202ENST00000374548 1116 ntTSL 1 (best)28.16■■■□□ 2.12e-6■■■■□ 21.2
MATR3P43243 EDA-212ENST00000533317 1462 ntTSL 1 (best)25.31■■□□□ 1.642e-6■■■■□ 21.2
MATR3P43243 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.89■■□□□ 1.252e-6■■■■□ 21.2
MATR3P43243 EDA-205ENST00000502251 1167 ntTSL 1 (best)22.89■■□□□ 1.252e-6■■■■□ 21.2
MATR3P43243 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.89■■□□□ 1.252e-6■■■■□ 21.2
MATR3P43243 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.962e-6■■■■□ 21.2
MATR3P43243 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.862e-6■■■■□ 21.2
MATR3P43243 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.862e-6■■■■□ 21.2
MATR3P43243 EDA-206ENST00000503592 557 ntTSL 57.46□□□□□ -1.222e-6■■■■□ 21.2
MATR3P43243 EDA-207ENST00000510681 536 ntTSL 44.25□□□□□ -1.732e-6■■■■□ 21.2
MATR3P43243 EDA-211ENST00000530321 339 ntTSL 23.42□□□□□ -1.862e-6■■■■□ 21.2
MATR3P43243 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.072e-6■■■■□ 21.2
MATR3P43243 AC017083.4-201ENST00000406334 2306 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.32e-6■■■■□ 21.2
MATR3P43243 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.65□□□□□ -1.52e-6■■■■□ 21.2
MATR3P43243 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.88□□□□□ -1.952e-6■■■■□ 21.2
Retrieved 100 of 16,209 protein–RNA pairs in 161.4 ms