RNA–Protein interactions for RNA: ENST00000481600.5

EDRF1-208, Transcript of erythroid differentiation regulatory factor 1, humanhuman

TSL 2

Gene EDRF1, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDRF1-208ENST00000481600 NISCHQ9Y2I1 1504 aa23.13■■□□□ 1.29
EDRF1-208ENST00000481600 DCAF8L2P0C7V8 631 aa20.09■□□□□ 0.81
EDRF1-208ENST00000481600 SHROOM4Q9ULL8 1493 aa19.96■□□□□ 0.79
EDRF1-208ENST00000481600 SUPT5HO00267 1087 aaKnown RBP19.7■□□□□ 0.74
EDRF1-208ENST00000481600 ZCCHC6Q5VYS8 1495 aaKnown RBP19.55■□□□□ 0.72
EDRF1-208ENST00000481600 CCDC180Q9P1Z9 1646 aa19.55■□□□□ 0.72
EDRF1-208ENST00000481600 CHIC1Q5VXU3 224 aa19.09■□□□□ 0.65
EDRF1-208ENST00000481600 DCAF1Q9Y4B6 1507 aa18.94■□□□□ 0.62
EDRF1-208ENST00000481600 MYO15BQ96JP2 1530 aa18.87■□□□□ 0.61
EDRF1-208ENST00000481600 HRCP23327 699 aa18.71■□□□□ 0.59
EDRF1-208ENST00000481600 EHMT2Q96KQ7 1210 aa18.71■□□□□ 0.59
EDRF1-208ENST00000481600 PCGF6Q9BYE7 350 aa18.7■□□□□ 0.58
EDRF1-208ENST00000481600 LOC105371045A0A1W2PR82 267 aa18.54■□□□□ 0.56
EDRF1-208ENST00000481600 ABCC9O60706 1549 aa18.45■□□□□ 0.54
EDRF1-208ENST00000481600 SCRIBQ14160 1630 aa18.42■□□□□ 0.54
EDRF1-208ENST00000481600 RSF1Q96T23 1441 aaPredicted RBP18.37■□□□□ 0.53
EDRF1-208ENST00000481600 TRIM41Q8WV44 630 aa18.36■□□□□ 0.53
EDRF1-208ENST00000481600 TRIM26Q12899 539 aaPredicted RBP18.32■□□□□ 0.52
EDRF1-208ENST00000481600 FAM9AQ8IZU1 332 aaPredicted RBP18.31■□□□□ 0.52
EDRF1-208ENST00000481600 PPARGC1BQ86YN6 1023 aaKnown RBP18.26■□□□□ 0.51
EDRF1-208ENST00000481600 PELP1Q8IZL8 1130 aaKnown RBP18.21■□□□□ 0.51
EDRF1-208ENST00000481600 RB1CC1Q8TDY2 1594 aa18.17■□□□□ 0.5
EDRF1-208ENST00000481600 NACADO15069 1562 aa18.15■□□□□ 0.5
EDRF1-208ENST00000481600 TTBK1Q5TCY1 1321 aaPredicted RBP18.08■□□□□ 0.48
EDRF1-208ENST00000481600 ZEB1P37275 1124 aaPredicted RBP18.07■□□□□ 0.48
EDRF1-208ENST00000481600 CECR2Q9BXF3 1484 aa18.03■□□□□ 0.48
EDRF1-208ENST00000481600 APLP2Q06481 763 aa18.01■□□□□ 0.47
EDRF1-208ENST00000481600 MROH2BQ7Z745 1585 aa17.97■□□□□ 0.47
EDRF1-208ENST00000481600 WIZO95785 1651 aa17.85■□□□□ 0.45
EDRF1-208ENST00000481600 BAZ1AQ9NRL2 1556 aaPredicted RBP17.79■□□□□ 0.44
EDRF1-208ENST00000481600 CCER1Q8TC90 406 aaPredicted RBP17.77■□□□□ 0.44
EDRF1-208ENST00000481600 RANGAP1P46060 587 aaPredicted RBP17.76■□□□□ 0.43
EDRF1-208ENST00000481600 MYT1Q01538 1121 aa17.67■□□□□ 0.42
EDRF1-208ENST00000481600 CENPBP07199 599 aaPredicted RBP17.64■□□□□ 0.41
EDRF1-208ENST00000481600 TOP2AP11388 1531 aaKnown RBP17.62■□□□□ 0.41
EDRF1-208ENST00000481600 UBTFP17480 764 aaKnown RBP17.61■□□□□ 0.41
EDRF1-208ENST00000481600 CCDC88BA6NC98 1476 aa17.57■□□□□ 0.4
EDRF1-208ENST00000481600 SMARCA4P51532 1647 aa17.57■□□□□ 0.4
EDRF1-208ENST00000481600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
EDRF1-208ENST00000481600 EIF4G1Q04637 1599 aaKnown RBP17.53■□□□□ 0.4
EDRF1-208ENST00000481600 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
EDRF1-208ENST00000481600 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
EDRF1-208ENST00000481600 PABPN1Q86U42 306 aaKnown RBP eCLIP17.48■□□□□ 0.39
EDRF1-208ENST00000481600 CSRNP3Q8WYN3 585 aa17.48■□□□□ 0.39
EDRF1-208ENST00000481600 EEA1Q15075 1411 aa17.46■□□□□ 0.39
EDRF1-208ENST00000481600 CEP162Q5TB80 1403 aa17.45■□□□□ 0.38
EDRF1-208ENST00000481600 TNIKQ9UKE5 1360 aa17.44■□□□□ 0.38
EDRF1-208ENST00000481600 SOGA1O94964 1423 aa17.43■□□□□ 0.38
EDRF1-208ENST00000481600 ATP1B4Q9UN42 357 aaPredicted RBP17.43■□□□□ 0.38
EDRF1-208ENST00000481600 YTHDC1Q96MU7 727 aaKnown RBP17.42■□□□□ 0.38
EDRF1-208ENST00000481600 WRNQ14191 1432 aaPredicted RBP eCLIP17.41■□□□□ 0.38
EDRF1-208ENST00000481600 UNC13AQ9UPW8 1703 aa17.35■□□□□ 0.37
EDRF1-208ENST00000481600 GOLGA3Q08378 1498 aa17.33■□□□□ 0.36
EDRF1-208ENST00000481600 RUSC2Q8N2Y8 1516 aa17.29■□□□□ 0.36
EDRF1-208ENST00000481600 SCAF1Q9H7N4 1312 aaKnown RBP17.26■□□□□ 0.35
EDRF1-208ENST00000481600 DIEXFQ68CQ4 756 aaKnown RBP17.26■□□□□ 0.35
EDRF1-208ENST00000481600 CEP164Q9UPV0 1460 aa17.22■□□□□ 0.35
EDRF1-208ENST00000481600 BICRAQ9NZM4 1560 aa17.21■□□□□ 0.35
EDRF1-208ENST00000481600 BAZ1BQ9UIG0 1483 aaKnown RBP17.17■□□□□ 0.34
EDRF1-208ENST00000481600 PEG3Q9GZU2 1588 aa17.17■□□□□ 0.34
EDRF1-208ENST00000481600 HNRNPUL2Q1KMD3 747 aaKnown RBP17.16■□□□□ 0.34
EDRF1-208ENST00000481600 CLIP1P30622 1438 aa17.16■□□□□ 0.34
EDRF1-208ENST00000481600 ACIN1Q9UKV3 1341 aaKnown RBP17.15■□□□□ 0.34
EDRF1-208ENST00000481600 ATAD2BQ9ULI0 1458 aa17.15■□□□□ 0.34
EDRF1-208ENST00000481600 ERICH6Q7L0X2 663 aa17.14■□□□□ 0.33
EDRF1-208ENST00000481600 ZNF316A6NFI3 1004 aaPredicted RBP17.11■□□□□ 0.33
EDRF1-208ENST00000481600 SYNJ1O43426 1573 aa17.1■□□□□ 0.33
EDRF1-208ENST00000481600 NEFLP07196 543 aa17.09■□□□□ 0.33
EDRF1-208ENST00000481600 ITGAEP38570 1179 aa17.09■□□□□ 0.33
EDRF1-208ENST00000481600 KIF21BO75037 1637 aa17.08■□□□□ 0.32
EDRF1-208ENST00000481600 NEUROD1Q13562 356 aa17.07■□□□□ 0.32
EDRF1-208ENST00000481600 VPS8Q8N3P4 1428 aa17.05■□□□□ 0.32
EDRF1-208ENST00000481600 GTF3C3Q9Y5Q9 886 aa17.01■□□□□ 0.31
EDRF1-208ENST00000481600 RAPGEF2Q9Y4G8 1499 aa17■□□□□ 0.31
EDRF1-208ENST00000481600 TOP2BQ02880 1626 aa16.9■□□□□ 0.3
EDRF1-208ENST00000481600 KIF27Q86VH2 1401 aa16.83■□□□□ 0.29
EDRF1-208ENST00000481600 ERICH3Q5RHP9 1530 aa16.82■□□□□ 0.28
EDRF1-208ENST00000481600 MIER1Q8N108 512 aa16.81■□□□□ 0.28
EDRF1-208ENST00000481600 PRXQ9BXM0 1461 aa16.8■□□□□ 0.28
EDRF1-208ENST00000481600 NCAPD3P42695 1498 aa16.8■□□□□ 0.28
EDRF1-208ENST00000481600 BIVM-ERCC5R4GMW8 1640 aa16.79■□□□□ 0.28
EDRF1-208ENST00000481600 CLSPNQ9HAW4 1339 aa16.79■□□□□ 0.28
EDRF1-208ENST00000481600 HMGXB3Q12766 1538 aa16.76■□□□□ 0.27
EDRF1-208ENST00000481600 POLR3GLQ9BT43 218 aa16.76■□□□□ 0.27
EDRF1-208ENST00000481600 CNGB1Q14028 1251 aaPredicted RBP16.74■□□□□ 0.27
EDRF1-208ENST00000481600 KANK4Q5T7N3 995 aaPredicted RBP16.74■□□□□ 0.27
EDRF1-208ENST00000481600 ARAP1Q96P48 1450 aa16.74■□□□□ 0.27
EDRF1-208ENST00000481600 CUX1P39880 1505 aa16.72■□□□□ 0.27
EDRF1-208ENST00000481600 DHX57Q6P158 1386 aaKnown RBP16.68■□□□□ 0.26
EDRF1-208ENST00000481600 CFTRP13569 1480 aa16.68■□□□□ 0.26
EDRF1-208ENST00000481600 CCNB3Q8WWL7 1395 aa16.64■□□□□ 0.25
EDRF1-208ENST00000481600 CUX2O14529 1486 aa16.62■□□□□ 0.25
EDRF1-208ENST00000481600 RRBP1Q9P2E9 1410 aaKnown RBP16.62■□□□□ 0.25
EDRF1-208ENST00000481600 ARHGAP35Q9NRY4 1499 aa16.6■□□□□ 0.25
EDRF1-208ENST00000481600 FAM50AQ14320 339 aaKnown RBP16.59■□□□□ 0.25
EDRF1-208ENST00000481600 CARMIL1Q5VZK9 1371 aa16.57■□□□□ 0.24
EDRF1-208ENST00000481600 IGF1RP08069 1367 aa16.56■□□□□ 0.24
EDRF1-208ENST00000481600 CADPSQ9ULU8 1353 aa16.55■□□□□ 0.24
EDRF1-208ENST00000481600 P3H3Q8IVL6 736 aa16.49■□□□□ 0.23
EDRF1-208ENST00000481600 RAB3GAP2Q9H2M9 1393 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms