RNA–Protein interactions for RNA: ENST00000506334.1

ARHGEF28-207, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-207ENST00000506334 AEBP2Q6ZN18 517 aaPredicted RBP22.75■■□□□ 1.23
ARHGEF28-207ENST00000506334 CHIC1Q5VXU3 224 aa21.48■■□□□ 1.03
ARHGEF28-207ENST00000506334 NISCHQ9Y2I1 1504 aa19.91■□□□□ 0.78
ARHGEF28-207ENST00000506334 SENP3Q9H4L4 574 aaPredicted RBP19.55■□□□□ 0.72
ARHGEF28-207ENST00000506334 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
ARHGEF28-207ENST00000506334 ABCC9O60706 1549 aa18.33■□□□□ 0.53
ARHGEF28-207ENST00000506334 FOXD1Q16676 465 aa18.17■□□□□ 0.5
ARHGEF28-207ENST00000506334 CCDC180Q9P1Z9 1646 aa17.93■□□□□ 0.46
ARHGEF28-207ENST00000506334 DNAJC5BQ9UF47 199 aa17.61■□□□□ 0.41
ARHGEF28-207ENST00000506334 RB1CC1Q8TDY2 1594 aa17.29■□□□□ 0.36
ARHGEF28-207ENST00000506334 MSH5O43196 834 aa17.17■□□□□ 0.34
ARHGEF28-207ENST00000506334 PLPPR3Q6T4P5 718 aa17.12■□□□□ 0.33
ARHGEF28-207ENST00000506334 NACADO15069 1562 aa17.11■□□□□ 0.33
ARHGEF28-207ENST00000506334 PABPN1Q86U42 306 aaKnown RBP eCLIP17.1■□□□□ 0.33
ARHGEF28-207ENST00000506334 DCAF8L2P0C7V8 631 aa17.08■□□□□ 0.32
ARHGEF28-207ENST00000506334 POTEDQ86YR6 584 aa17.02■□□□□ 0.32
ARHGEF28-207ENST00000506334 PIAS4Q8N2W9 510 aaPredicted RBP16.98■□□□□ 0.31
ARHGEF28-207ENST00000506334 PPP6R1Q9UPN7 881 aa16.8■□□□□ 0.28
ARHGEF28-207ENST00000506334 MYO15BQ96JP2 1530 aa16.8■□□□□ 0.28
ARHGEF28-207ENST00000506334 UNC13AQ9UPW8 1703 aa16.79■□□□□ 0.28
ARHGEF28-207ENST00000506334 BICRAQ9NZM4 1560 aa16.77■□□□□ 0.28
ARHGEF28-207ENST00000506334 ADRA2BP18089 450 aa16.76■□□□□ 0.27
ARHGEF28-207ENST00000506334 CECR2Q9BXF3 1484 aa16.57■□□□□ 0.24
ARHGEF28-207ENST00000506334 SHROOM4Q9ULL8 1493 aa16.55■□□□□ 0.24
ARHGEF28-207ENST00000506334 CC2D2AQ9P2K1 1620 aa16.52■□□□□ 0.23
ARHGEF28-207ENST00000506334 DNAJC5Q9H3Z4 198 aa16.46■□□□□ 0.23
ARHGEF28-207ENST00000506334 DCAF1Q9Y4B6 1507 aa16.44■□□□□ 0.22
ARHGEF28-207ENST00000506334 EIF4G1Q04637 1599 aaKnown RBP16.4■□□□□ 0.22
ARHGEF28-207ENST00000506334 ZCCHC6Q5VYS8 1495 aaKnown RBP16.38■□□□□ 0.21
ARHGEF28-207ENST00000506334 SCRIBQ14160 1630 aa16.3■□□□□ 0.2
ARHGEF28-207ENST00000506334 CUX2O14529 1486 aa15.97■□□□□ 0.15
ARHGEF28-207ENST00000506334 ERCC6Q03468 1493 aa15.86■□□□□ 0.13
ARHGEF28-207ENST00000506334 NCAPD3P42695 1498 aa15.85■□□□□ 0.13
ARHGEF28-207ENST00000506334 ATAD2BQ9ULI0 1458 aa15.72■□□□□ 0.11
ARHGEF28-207ENST00000506334 NESP48681 1621 aa15.64■□□□□ 0.09
ARHGEF28-207ENST00000506334 SMARCA2P51531 1590 aa15.63■□□□□ 0.09
ARHGEF28-207ENST00000506334 HMGXB3Q12766 1538 aa15.62■□□□□ 0.09
ARHGEF28-207ENST00000506334 SMARCA4P51532 1647 aa15.55■□□□□ 0.08
ARHGEF28-207ENST00000506334 TRIM41Q8WV44 630 aa15.54■□□□□ 0.08
ARHGEF28-207ENST00000506334 BAZ1BQ9UIG0 1483 aaKnown RBP15.52■□□□□ 0.08
ARHGEF28-207ENST00000506334 LAMC3Q9Y6N6 1575 aa15.49■□□□□ 0.07
ARHGEF28-207ENST00000506334 PDS5BQ9NTI5 1447 aa15.48■□□□□ 0.07
ARHGEF28-207ENST00000506334 THOC2Q8NI27 1593 aaKnown RBP15.48■□□□□ 0.07
ARHGEF28-207ENST00000506334 SCAF1Q9H7N4 1312 aaKnown RBP15.46■□□□□ 0.07
ARHGEF28-207ENST00000506334 BAZ1AQ9NRL2 1556 aaPredicted RBP15.46■□□□□ 0.07
ARHGEF28-207ENST00000506334 DMRT2Q9Y5R5 561 aa15.44■□□□□ 0.06
ARHGEF28-207ENST00000506334 PEG3Q9GZU2 1588 aa15.44■□□□□ 0.06
ARHGEF28-207ENST00000506334 MAPK8IP2Q13387 824 aaPredicted RBP15.43■□□□□ 0.06
ARHGEF28-207ENST00000506334 CADPSQ9ULU8 1353 aa15.37■□□□□ 0.05
ARHGEF28-207ENST00000506334 KIF21AQ7Z4S6 1674 aa15.35■□□□□ 0.05
ARHGEF28-207ENST00000506334 MROH2BQ7Z745 1585 aa15.32■□□□□ 0.04
ARHGEF28-207ENST00000506334 OSCARQ8IYS5 282 aa15.31■□□□□ 0.04
ARHGEF28-207ENST00000506334 MRC2Q9UBG0 1479 aa15.3■□□□□ 0.04
ARHGEF28-207ENST00000506334 WDR62O43379 1518 aa15.24■□□□□ 0.03
ARHGEF28-207ENST00000506334 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
ARHGEF28-207ENST00000506334 FANCD2Q9BXW9 1451 aa15.14■□□□□ 0.01
ARHGEF28-207ENST00000506334 CFTRP13569 1480 aa15.08■□□□□ 0.01
ARHGEF28-207ENST00000506334 WIZO95785 1651 aa15.07■□□□□ 0
ARHGEF28-207ENST00000506334 URB2Q14146 1524 aaKnown RBP15.01□□□□□ -0.01
ARHGEF28-207ENST00000506334 RIMBP3CA6NJZ7 1639 aa14.95□□□□□ -0.02
ARHGEF28-207ENST00000506334 RIMBP3BA6NNM3 1639 aa14.95□□□□□ -0.02
ARHGEF28-207ENST00000506334 RIMBP3Q9UFD9 1639 aa14.95□□□□□ -0.02
ARHGEF28-207ENST00000506334 CYB5RLQ6IPT4 315 aa14.94□□□□□ -0.02
ARHGEF28-207ENST00000506334 PPP4R3CPQ6ZMV5 832 aa14.94□□□□□ -0.02
ARHGEF28-207ENST00000506334 RSF1Q96T23 1441 aaPredicted RBP14.92□□□□□ -0.02
ARHGEF28-207ENST00000506334 IFT140Q96RY7 1462 aa14.91□□□□□ -0.02
ARHGEF28-207ENST00000506334 ARHGEF11O15085 1522 aa14.9□□□□□ -0.02
ARHGEF28-207ENST00000506334 ZNF608Q9ULD9 1512 aaPredicted RBP14.88□□□□□ -0.03
ARHGEF28-207ENST00000506334 TRHP20396 242 aaPredicted RBP14.88□□□□□ -0.03
ARHGEF28-207ENST00000506334 TOP2AP11388 1531 aaKnown RBP14.87□□□□□ -0.03
ARHGEF28-207ENST00000506334 DCAF8L1A6NGE4 600 aa14.86□□□□□ -0.03
ARHGEF28-207ENST00000506334 CACNB1Q02641 598 aaPredicted RBP14.84□□□□□ -0.03
ARHGEF28-207ENST00000506334 ABCC8Q09428 1581 aa14.81□□□□□ -0.04
ARHGEF28-207ENST00000506334 TOPBP1Q92547 1522 aa14.8□□□□□ -0.04
ARHGEF28-207ENST00000506334 HOXD11P31277 338 aaPredicted RBP14.79□□□□□ -0.04
ARHGEF28-207ENST00000506334 CCDC88BA6NC98 1476 aa14.78□□□□□ -0.04
ARHGEF28-207ENST00000506334 FBLN2P98095 1184 aa14.78□□□□□ -0.04
ARHGEF28-207ENST00000506334 AQRO60306 1485 aaKnown RBP eCLIP14.76□□□□□ -0.05
ARHGEF28-207ENST00000506334 PRDM2Q13029 1718 aa14.75□□□□□ -0.05
ARHGEF28-207ENST00000506334 CNKSR2Q8WXI2 1034 aa14.74□□□□□ -0.05
ARHGEF28-207ENST00000506334 ARAP1Q96P48 1450 aa14.73□□□□□ -0.05
ARHGEF28-207ENST00000506334 EIF4G3O43432 1585 aaKnown RBP14.71□□□□□ -0.05
ARHGEF28-207ENST00000506334 DNMBPQ6XZF7 1577 aa14.68□□□□□ -0.06
ARHGEF28-207ENST00000506334 TARBP1Q13395 1621 aaKnown RBP14.66□□□□□ -0.06
ARHGEF28-207ENST00000506334 RNF216Q9NWF9 866 aaPredicted RBP14.65□□□□□ -0.06
ARHGEF28-207ENST00000506334 CHD1O14646 1710 aa14.65□□□□□ -0.06
ARHGEF28-207ENST00000506334 CHMP7Q8WUX9 453 aaPredicted RBP14.64□□□□□ -0.07
ARHGEF28-207ENST00000506334 SOGA1O94964 1423 aa14.63□□□□□ -0.07
ARHGEF28-207ENST00000506334 TDRD9Q8NDG6 1382 aaKnown RBP14.62□□□□□ -0.07
ARHGEF28-207ENST00000506334 POLA1P09884 1462 aaPredicted RBP14.62□□□□□ -0.07
ARHGEF28-207ENST00000506334 RAD54L2Q9Y4B4 1467 aa14.59□□□□□ -0.07
ARHGEF28-207ENST00000506334 RNF39Q9H2S5 420 aa14.58□□□□□ -0.08
ARHGEF28-207ENST00000506334 CLASP1Q7Z460 1538 aa14.53□□□□□ -0.08
ARHGEF28-207ENST00000506334 SNAPC4Q5SXM2 1469 aa14.53□□□□□ -0.08
ARHGEF28-207ENST00000506334 SYNJ1O43426 1573 aa14.51□□□□□ -0.09
ARHGEF28-207ENST00000506334 MAGI1Q96QZ7 1491 aaPredicted RBP14.51□□□□□ -0.09
ARHGEF28-207ENST00000506334 WDR97A6NE52 1622 aa14.51□□□□□ -0.09
ARHGEF28-207ENST00000506334 GRIN2BQ13224 1484 aa14.5□□□□□ -0.09
ARHGEF28-207ENST00000506334 SYNJ2O15056 1496 aa14.48□□□□□ -0.09
ARHGEF28-207ENST00000506334 FGD5Q6ZNL6 1462 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms