RNA–Protein interactions for RNA: ENST00000409377.1

PPP3R1-202, Transcript of protein phosphatase 3 regulatory subunit B, alpha, humanhuman

TSL 3 BASIC

Gene PPP3R1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3R1-202ENST00000409377 AEBP2Q6ZN18 517 aaPredicted RBP22.33■■□□□ 1.17
PPP3R1-202ENST00000409377 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
PPP3R1-202ENST00000409377 SENP3Q9H4L4 574 aaPredicted RBP19.08■□□□□ 0.64
PPP3R1-202ENST00000409377 PHF23Q9BUL5 403 aaPredicted RBP18.74■□□□□ 0.59
PPP3R1-202ENST00000409377 POTEDQ86YR6 584 aa18.28■□□□□ 0.52
PPP3R1-202ENST00000409377 FOXD1Q16676 465 aa17.96■□□□□ 0.47
PPP3R1-202ENST00000409377 MSH5O43196 834 aa17.07■□□□□ 0.32
PPP3R1-202ENST00000409377 PIAS4Q8N2W9 510 aaPredicted RBP16.56■□□□□ 0.24
PPP3R1-202ENST00000409377 PPP6R1Q9UPN7 881 aa16.14■□□□□ 0.17
PPP3R1-202ENST00000409377 ADRA2BP18089 450 aa16.03■□□□□ 0.16
PPP3R1-202ENST00000409377 PLPPR3Q6T4P5 718 aa15.74■□□□□ 0.11
PPP3R1-202ENST00000409377 CACNB1Q02641 598 aaPredicted RBP15.25■□□□□ 0.03
PPP3R1-202ENST00000409377 MAPK8IP2Q13387 824 aaPredicted RBP15.01□□□□□ -0.01
PPP3R1-202ENST00000409377 DMRT2Q9Y5R5 561 aa15.01□□□□□ -0.01
PPP3R1-202ENST00000409377 RNF39Q9H2S5 420 aa14.53□□□□□ -0.08
PPP3R1-202ENST00000409377 SCAF1Q9H7N4 1312 aaKnown RBP14.52□□□□□ -0.08
PPP3R1-202ENST00000409377 DCAF8L1A6NGE4 600 aa14.49□□□□□ -0.09
PPP3R1-202ENST00000409377 C1QBPQ07021 282 aaKnown RBP14.21□□□□□ -0.13
PPP3R1-202ENST00000409377 POTEHQ6S545 545 aa14.14□□□□□ -0.15
PPP3R1-202ENST00000409377 HOXD11P31277 338 aaPredicted RBP14.09□□□□□ -0.15
PPP3R1-202ENST00000409377 RNF216Q9NWF9 866 aaPredicted RBP13.73□□□□□ -0.21
PPP3R1-202ENST00000409377 PPP4R3CPQ6ZMV5 832 aa13.71□□□□□ -0.21
PPP3R1-202ENST00000409377 DNAJC5BQ9UF47 199 aa13.69□□□□□ -0.22
PPP3R1-202ENST00000409377 CNKSR2Q8WXI2 1034 aa13.63□□□□□ -0.23
PPP3R1-202ENST00000409377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.44□□□□□ -0.26
PPP3R1-202ENST00000409377 DSG3P32926 999 aa13.32□□□□□ -0.28
PPP3R1-202ENST00000409377 SPINK5Q9NQ38 1064 aaPredicted RBP13.21□□□□□ -0.29
PPP3R1-202ENST00000409377 CAPN15O75808 1086 aa13.18□□□□□ -0.3
PPP3R1-202ENST00000409377 U3KPZ7 1027 aaPredicted RBP13.1□□□□□ -0.31
PPP3R1-202ENST00000409377 ABCB7O75027 752 aa12.85□□□□□ -0.35
PPP3R1-202ENST00000409377 NCBP3Q53F19 620 aaKnown RBP12.84□□□□□ -0.35
PPP3R1-202ENST00000409377 SP7Q8TDD2 431 aaPredicted RBP12.81□□□□□ -0.36
PPP3R1-202ENST00000409377 CHRDL2Q6WN34 429 aa12.8□□□□□ -0.36
PPP3R1-202ENST00000409377 TRHP20396 242 aaPredicted RBP12.77□□□□□ -0.37
PPP3R1-202ENST00000409377 NPM3O75607 178 aaKnown RBP12.75□□□□□ -0.37
PPP3R1-202ENST00000409377 RBM42Q9BTD8 480 aaKnown RBP12.66□□□□□ -0.38
PPP3R1-202ENST00000409377 ZNF219Q9P2Y4 722 aaPredicted RBP12.64□□□□□ -0.39
PPP3R1-202ENST00000409377 APLP2Q06481 763 aa12.49□□□□□ -0.41
PPP3R1-202ENST00000409377 SLC4A2P04920 1241 aa12.42□□□□□ -0.42
PPP3R1-202ENST00000409377 HAX1O00165 279 aa12.33□□□□□ -0.44
PPP3R1-202ENST00000409377 PIP4P2Q8N4L2 257 aa12.33□□□□□ -0.44
PPP3R1-202ENST00000409377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.28□□□□□ -0.44
PPP3R1-202ENST00000409377 HNRNPUL2Q1KMD3 747 aaKnown RBP12.28□□□□□ -0.44
PPP3R1-202ENST00000409377 POLA2Q14181 598 aa12.2□□□□□ -0.46
PPP3R1-202ENST00000409377 SAMD1Q6SPF0 538 aaPredicted RBP12.2□□□□□ -0.46
PPP3R1-202ENST00000409377 AKT1S1Q96B36 256 aa12.19□□□□□ -0.46
PPP3R1-202ENST00000409377 EVX2Q03828 476 aa12.18□□□□□ -0.46
PPP3R1-202ENST00000409377 REM2Q8IYK8 340 aaPredicted RBP12.13□□□□□ -0.47
PPP3R1-202ENST00000409377 FXR2P51116 673 aaKnown RBP eCLIP12.06□□□□□ -0.48
PPP3R1-202ENST00000409377 PLSCR2Q9NRY7 297 aa12.05□□□□□ -0.48
PPP3R1-202ENST00000409377 PITPNM1O00562 1244 aa12.04□□□□□ -0.48
PPP3R1-202ENST00000409377 LHX8Q68G74 356 aa12□□□□□ -0.49
PPP3R1-202ENST00000409377 OSCARQ8IYS5 282 aa11.9□□□□□ -0.5
PPP3R1-202ENST00000409377 GABBR2O75899 941 aa11.79□□□□□ -0.52
PPP3R1-202ENST00000409377 ZBTB12Q9Y330 459 aaPredicted RBP11.79□□□□□ -0.52
PPP3R1-202ENST00000409377 MYCNP04198 464 aaPredicted RBP11.76□□□□□ -0.53
PPP3R1-202ENST00000409377 KCNA4P22459 653 aa11.73□□□□□ -0.53
PPP3R1-202ENST00000409377 C19orf67A6NJJ6 358 aa11.72□□□□□ -0.53
PPP3R1-202ENST00000409377 PRKAR2AP13861 404 aaKnown RBP11.69□□□□□ -0.54
PPP3R1-202ENST00000409377 ATF5Q9Y2D1 282 aaPredicted RBP11.67□□□□□ -0.54
PPP3R1-202ENST00000409377 POTEIP0CG38 1075 aa11.58□□□□□ -0.56
PPP3R1-202ENST00000409377 CLEC11AQ9Y240 323 aa11.51□□□□□ -0.57
PPP3R1-202ENST00000409377 CHADLQ6NUI6 762 aa11.43□□□□□ -0.58
PPP3R1-202ENST00000409377 SPDYE1Q8NFV5 336 aaPredicted RBP11.41□□□□□ -0.58
PPP3R1-202ENST00000409377 SPDYE2BA6NHP3 402 aa11.39□□□□□ -0.59
PPP3R1-202ENST00000409377 SPDYE6P0CI01 402 aa11.39□□□□□ -0.59
PPP3R1-202ENST00000409377 SPDYE2Q495Y8 402 aa11.39□□□□□ -0.59
PPP3R1-202ENST00000409377 POTEMA6NI47 508 aa11.38□□□□□ -0.59
PPP3R1-202ENST00000409377 POTEGQ6S5H5 508 aa11.31□□□□□ -0.6
PPP3R1-202ENST00000409377 OTUD5Q96G74 571 aa11.3□□□□□ -0.6
PPP3R1-202ENST00000409377 CD44P16070 742 aaKnown RBP11.27□□□□□ -0.61
PPP3R1-202ENST00000409377 DCBLD2Q96PD2 775 aa11.25□□□□□ -0.61
PPP3R1-202ENST00000409377 POTEB2H3BUK9 544 aa11.19□□□□□ -0.62
PPP3R1-202ENST00000409377 FOXD4L1Q9NU39 408 aa11.17□□□□□ -0.62
PPP3R1-202ENST00000409377 SSUH2Q9Y2M2 353 aa11.17□□□□□ -0.62
PPP3R1-202ENST00000409377 FBLN2P98095 1184 aa11.15□□□□□ -0.62
PPP3R1-202ENST00000409377 PRR29P0C7W0 189 aa11.14□□□□□ -0.63
PPP3R1-202ENST00000409377 CLCN6P51797 869 aa11.14□□□□□ -0.63
PPP3R1-202ENST00000409377 ZNF692Q9BU19 519 aaPredicted RBP11.14□□□□□ -0.63
PPP3R1-202ENST00000409377 PCDH10Q9P2E7 1040 aa11.11□□□□□ -0.63
PPP3R1-202ENST00000409377 FARP1Q9Y4F1 1045 aaPredicted RBP11.1□□□□□ -0.63
PPP3R1-202ENST00000409377 MKRN4PQ13434 485 aaPredicted RBP11.06□□□□□ -0.64
PPP3R1-202ENST00000409377 ZNF579Q8NAF0 562 aaKnown RBP11.03□□□□□ -0.64
PPP3R1-202ENST00000409377 GALR2O43603 387 aaPredicted RBP11.02□□□□□ -0.65
PPP3R1-202ENST00000409377 LCE2DQ5TA82 110 aaPredicted RBP10.98□□□□□ -0.65
PPP3R1-202ENST00000409377 PABPN1Q86U42 306 aaKnown RBP eCLIP10.98□□□□□ -0.65
PPP3R1-202ENST00000409377 ZRANB1Q9UGI0 708 aa10.97□□□□□ -0.65
PPP3R1-202ENST00000409377 PELP1Q8IZL8 1130 aaKnown RBP10.9□□□□□ -0.66
PPP3R1-202ENST00000409377 POTEJP0CG39 1038 aa10.88□□□□□ -0.67
PPP3R1-202ENST00000409377 ATXN8OSP0DMR3 200 aa10.85□□□□□ -0.67
PPP3R1-202ENST00000409377 FAM163AQ96GL9 167 aaPredicted RBP10.85□□□□□ -0.67
PPP3R1-202ENST00000409377 SLC4A1APQ9BWU0 796 aaKnown RBP10.85□□□□□ -0.67
PPP3R1-202ENST00000409377 ZBTB22O15209 634 aa10.81□□□□□ -0.68
PPP3R1-202ENST00000409377 PHF12Q96QT6 1004 aa10.79□□□□□ -0.68
PPP3R1-202ENST00000409377 METRNQ9UJH8 293 aa10.79□□□□□ -0.68
PPP3R1-202ENST00000409377 MAMSTRQ6ZN01 415 aa10.73□□□□□ -0.69
PPP3R1-202ENST00000409377 CDAN1Q8IWY9 1227 aa10.71□□□□□ -0.69
PPP3R1-202ENST00000409377 CREBZFQ9NS37 354 aa10.69□□□□□ -0.7
PPP3R1-202ENST00000409377 C7P10643 843 aa10.67□□□□□ -0.7
PPP3R1-202ENST00000409377 ASTLQ6HA08 431 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms