RNA–Protein interactions for RNA: ENST00000368815.6

EDRF1-205, Transcript of erythroid differentiation regulatory factor 1, humanhuman

TSL 1 (best)

Gene EDRF1, Length 4,123 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDRF1-205ENST00000368815 NISCHQ9Y2I1 1504 aa22.79■■□□□ 1.24
EDRF1-205ENST00000368815 DCAF8L2P0C7V8 631 aa20.29■□□□□ 0.84
EDRF1-205ENST00000368815 ABCC9O60706 1549 aa20.11■□□□□ 0.81
EDRF1-205ENST00000368815 CCDC180Q9P1Z9 1646 aa19.91■□□□□ 0.78
EDRF1-205ENST00000368815 RB1CC1Q8TDY2 1594 aa19.09■□□□□ 0.65
EDRF1-205ENST00000368815 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
EDRF1-205ENST00000368815 NACADO15069 1562 aa18.98■□□□□ 0.63
EDRF1-205ENST00000368815 SHROOM4Q9ULL8 1493 aa18.92■□□□□ 0.62
EDRF1-205ENST00000368815 ZCCHC6Q5VYS8 1495 aaKnown RBP18.89■□□□□ 0.61
EDRF1-205ENST00000368815 SUPT5HO00267 1087 aaKnown RBP18.71■□□□□ 0.59
EDRF1-205ENST00000368815 MYO15BQ96JP2 1530 aa18.62■□□□□ 0.57
EDRF1-205ENST00000368815 SCRIBQ14160 1630 aa18.62■□□□□ 0.57
EDRF1-205ENST00000368815 DCAF1Q9Y4B6 1507 aa18.61■□□□□ 0.57
EDRF1-205ENST00000368815 DNAJC5BQ9UF47 199 aa18.21■□□□□ 0.5
EDRF1-205ENST00000368815 BICRAQ9NZM4 1560 aa18.1■□□□□ 0.49
EDRF1-205ENST00000368815 UNC13AQ9UPW8 1703 aa18.03■□□□□ 0.48
EDRF1-205ENST00000368815 CECR2Q9BXF3 1484 aa17.99■□□□□ 0.47
EDRF1-205ENST00000368815 EIF4G1Q04637 1599 aaKnown RBP17.9■□□□□ 0.46
EDRF1-205ENST00000368815 CC2D2AQ9P2K1 1620 aa17.81■□□□□ 0.44
EDRF1-205ENST00000368815 BAZ1AQ9NRL2 1556 aaPredicted RBP17.75■□□□□ 0.43
EDRF1-205ENST00000368815 BAZ1BQ9UIG0 1483 aaKnown RBP17.71■□□□□ 0.42
EDRF1-205ENST00000368815 EHMT2Q96KQ7 1210 aa17.68■□□□□ 0.42
EDRF1-205ENST00000368815 SMARCA2P51531 1590 aa17.65■□□□□ 0.42
EDRF1-205ENST00000368815 ATAD2BQ9ULI0 1458 aa17.63■□□□□ 0.41
EDRF1-205ENST00000368815 MROH2BQ7Z745 1585 aa17.59■□□□□ 0.41
EDRF1-205ENST00000368815 SMARCA4P51532 1647 aa17.58■□□□□ 0.41
EDRF1-205ENST00000368815 ERCC6Q03468 1493 aa17.56■□□□□ 0.4
EDRF1-205ENST00000368815 NCAPD3P42695 1498 aa17.55■□□□□ 0.4
EDRF1-205ENST00000368815 RSF1Q96T23 1441 aaPredicted RBP17.52■□□□□ 0.4
EDRF1-205ENST00000368815 FAM9AQ8IZU1 332 aaPredicted RBP17.5■□□□□ 0.39
EDRF1-205ENST00000368815 HMGXB3Q12766 1538 aa17.33■□□□□ 0.37
EDRF1-205ENST00000368815 WIZO95785 1651 aa17.33■□□□□ 0.37
EDRF1-205ENST00000368815 TRIM41Q8WV44 630 aa17.33■□□□□ 0.36
EDRF1-205ENST00000368815 PDS5BQ9NTI5 1447 aa17.33■□□□□ 0.36
EDRF1-205ENST00000368815 CADPSQ9ULU8 1353 aa17.29■□□□□ 0.36
EDRF1-205ENST00000368815 NESP48681 1621 aa17.22■□□□□ 0.35
EDRF1-205ENST00000368815 CHIC1Q5VXU3 224 aa17.2■□□□□ 0.34
EDRF1-205ENST00000368815 TOP2AP11388 1531 aaKnown RBP17.19■□□□□ 0.34
EDRF1-205ENST00000368815 PEG3Q9GZU2 1588 aa17.15■□□□□ 0.34
EDRF1-205ENST00000368815 CCDC88BA6NC98 1476 aa17.13■□□□□ 0.33
EDRF1-205ENST00000368815 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.32
EDRF1-205ENST00000368815 FBLN2P98095 1184 aa17.07■□□□□ 0.32
EDRF1-205ENST00000368815 FANCD2Q9BXW9 1451 aa17.06■□□□□ 0.32
EDRF1-205ENST00000368815 LAMC3Q9Y6N6 1575 aa17.04■□□□□ 0.32
EDRF1-205ENST00000368815 LOC105371045A0A1W2PR82 267 aa16.98■□□□□ 0.31
EDRF1-205ENST00000368815 RANGAP1P46060 587 aaPredicted RBP16.98■□□□□ 0.31
EDRF1-205ENST00000368815 CFTRP13569 1480 aa16.97■□□□□ 0.31
EDRF1-205ENST00000368815 TTBK1Q5TCY1 1321 aaPredicted RBP16.97■□□□□ 0.31
EDRF1-205ENST00000368815 PCGF6Q9BYE7 350 aa16.94■□□□□ 0.3
EDRF1-205ENST00000368815 MRC2Q9UBG0 1479 aa16.93■□□□□ 0.3
EDRF1-205ENST00000368815 UBTFP17480 764 aaKnown RBP16.88■□□□□ 0.29
EDRF1-205ENST00000368815 CUX2O14529 1486 aa16.85■□□□□ 0.29
EDRF1-205ENST00000368815 CHMP7Q8WUX9 453 aaPredicted RBP16.81■□□□□ 0.28
EDRF1-205ENST00000368815 ABCC8Q09428 1581 aa16.8■□□□□ 0.28
EDRF1-205ENST00000368815 APLP2Q06481 763 aa16.79■□□□□ 0.28
EDRF1-205ENST00000368815 SOGA1O94964 1423 aa16.76■□□□□ 0.27
EDRF1-205ENST00000368815 WRNQ14191 1432 aaPredicted RBP eCLIP16.75■□□□□ 0.27
EDRF1-205ENST00000368815 PPARGC1BQ86YN6 1023 aaKnown RBP16.75■□□□□ 0.27
EDRF1-205ENST00000368815 TDRD9Q8NDG6 1382 aaKnown RBP16.73■□□□□ 0.27
EDRF1-205ENST00000368815 OSCARQ8IYS5 282 aa16.72■□□□□ 0.27
EDRF1-205ENST00000368815 KIF21AQ7Z4S6 1674 aa16.7■□□□□ 0.26
EDRF1-205ENST00000368815 TOPBP1Q92547 1522 aa16.67■□□□□ 0.26
EDRF1-205ENST00000368815 URB2Q14146 1524 aaKnown RBP16.66■□□□□ 0.26
EDRF1-205ENST00000368815 IFT140Q96RY7 1462 aa16.64■□□□□ 0.25
EDRF1-205ENST00000368815 RAD54L2Q9Y4B4 1467 aa16.6■□□□□ 0.25
EDRF1-205ENST00000368815 FGD5Q6ZNL6 1462 aa16.59■□□□□ 0.25
EDRF1-205ENST00000368815 AQRO60306 1485 aaKnown RBP eCLIP16.59■□□□□ 0.255e-7■■■■□ 23.3
EDRF1-205ENST00000368815 WDR62O43379 1518 aa16.58■□□□□ 0.24
EDRF1-205ENST00000368815 DNMBPQ6XZF7 1577 aa16.58■□□□□ 0.24
EDRF1-205ENST00000368815 ATP1B4Q9UN42 357 aaPredicted RBP16.58■□□□□ 0.24
EDRF1-205ENST00000368815 POLA1P09884 1462 aaPredicted RBP16.55■□□□□ 0.24
EDRF1-205ENST00000368815 THOC2Q8NI27 1593 aaKnown RBP16.54■□□□□ 0.24
EDRF1-205ENST00000368815 DNAJC5Q9H3Z4 198 aa16.53■□□□□ 0.24
EDRF1-205ENST00000368815 KIF27Q86VH2 1401 aa16.49■□□□□ 0.23
EDRF1-205ENST00000368815 ZNF608Q9ULD9 1512 aaPredicted RBP16.48■□□□□ 0.23
EDRF1-205ENST00000368815 CUX1P39880 1505 aa16.47■□□□□ 0.23
EDRF1-205ENST00000368815 GAPVD1Q14C86 1478 aa16.46■□□□□ 0.23
EDRF1-205ENST00000368815 CYB5RLQ6IPT4 315 aa16.43■□□□□ 0.22
EDRF1-205ENST00000368815 GRIN2BQ13224 1484 aa16.42■□□□□ 0.22
EDRF1-205ENST00000368815 TRIM26Q12899 539 aaPredicted RBP16.41■□□□□ 0.22
EDRF1-205ENST00000368815 NPM1P06748 294 aaKnown RBP eCLIP16.4■□□□□ 0.22
EDRF1-205ENST00000368815 CSRNP3Q8WYN3 585 aa16.38■□□□□ 0.21
EDRF1-205ENST00000368815 PRDM2Q13029 1718 aa16.37■□□□□ 0.21
EDRF1-205ENST00000368815 TRHP20396 242 aaPredicted RBP16.37■□□□□ 0.21
EDRF1-205ENST00000368815 SNAPC4Q5SXM2 1469 aa16.36■□□□□ 0.21
EDRF1-205ENST00000368815 CCER1Q8TC90 406 aaPredicted RBP16.35■□□□□ 0.21
EDRF1-205ENST00000368815 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
EDRF1-205ENST00000368815 HNRNPUL2Q1KMD3 747 aaKnown RBP16.34■□□□□ 0.21
EDRF1-205ENST00000368815 CARMIL1Q5VZK9 1371 aa16.33■□□□□ 0.2
EDRF1-205ENST00000368815 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
EDRF1-205ENST00000368815 ABCA10Q8WWZ4 1543 aa16.29■□□□□ 0.2
EDRF1-205ENST00000368815 TOP2BQ02880 1626 aa16.29■□□□□ 0.2
EDRF1-205ENST00000368815 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
EDRF1-205ENST00000368815 JPH4Q96JJ6 628 aa16.27■□□□□ 0.2
EDRF1-205ENST00000368815 P3H3Q8IVL6 736 aa16.26■□□□□ 0.19
EDRF1-205ENST00000368815 FHAD1B1AJZ9 1412 aa16.26■□□□□ 0.19
EDRF1-205ENST00000368815 MAGI1Q96QZ7 1491 aaPredicted RBP16.26■□□□□ 0.19
EDRF1-205ENST00000368815 EIF4G3O43432 1585 aaKnown RBP16.25■□□□□ 0.19
EDRF1-205ENST00000368815 SYNJ2O15056 1496 aa16.23■□□□□ 0.19
EDRF1-205ENST00000368815 IGF1RP08069 1367 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms