RNA–Protein interactions for RNA: ENST00000527655.5

EDRF1-212, Transcript of erythroid differentiation regulatory factor 1, humanhuman

TSL 3

Gene EDRF1, Length 851 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDRF1-212ENST00000527655 AEBP2Q6ZN18 517 aaPredicted RBP36.21■■■■□ 3.39
EDRF1-212ENST00000527655 CHIC1Q5VXU3 224 aa34.37■■■■□ 3.09
EDRF1-212ENST00000527655 SENP3Q9H4L4 574 aaPredicted RBP30.7■■■□□ 2.51
EDRF1-212ENST00000527655 PHF23Q9BUL5 403 aaPredicted RBP30.38■■■□□ 2.45
EDRF1-212ENST00000527655 FOXD1Q16676 465 aa28.71■■■□□ 2.19
EDRF1-212ENST00000527655 PLPPR3Q6T4P5 718 aa27.43■■□□□ 1.98
EDRF1-212ENST00000527655 PPP6R1Q9UPN7 881 aa26.98■■□□□ 1.91
EDRF1-212ENST00000527655 ADRA2BP18089 450 aa26.85■■□□□ 1.89
EDRF1-212ENST00000527655 PIAS4Q8N2W9 510 aaPredicted RBP26.77■■□□□ 1.88
EDRF1-212ENST00000527655 MSH5O43196 834 aa26.69■■□□□ 1.86
EDRF1-212ENST00000527655 POTEDQ86YR6 584 aa26.02■■□□□ 1.76
EDRF1-212ENST00000527655 MAPK8IP2Q13387 824 aaPredicted RBP24.66■■□□□ 1.54
EDRF1-212ENST00000527655 DMRT2Q9Y5R5 561 aa24.41■■□□□ 1.5
EDRF1-212ENST00000527655 SCAF1Q9H7N4 1312 aaKnown RBP24.36■■□□□ 1.49
EDRF1-212ENST00000527655 PPP4R3CPQ6ZMV5 832 aa24.11■■□□□ 1.45
EDRF1-212ENST00000527655 CNKSR2Q8WXI2 1034 aa23.59■■□□□ 1.37
EDRF1-212ENST00000527655 HOXD11P31277 338 aaPredicted RBP23.56■■□□□ 1.36
EDRF1-212ENST00000527655 RNF216Q9NWF9 866 aaPredicted RBP23.37■■□□□ 1.33
EDRF1-212ENST00000527655 DCAF8L1A6NGE4 600 aa23.32■■□□□ 1.32
EDRF1-212ENST00000527655 NCBP3Q53F19 620 aaKnown RBP23.09■■□□□ 1.29
EDRF1-212ENST00000527655 NPM3O75607 178 aaKnown RBP22.91■■□□□ 1.26
EDRF1-212ENST00000527655 RNF39Q9H2S5 420 aa22.88■■□□□ 1.25
EDRF1-212ENST00000527655 CACNB1Q02641 598 aaPredicted RBP22.87■■□□□ 1.25
EDRF1-212ENST00000527655 DNAJC5BQ9UF47 199 aa22.66■■□□□ 1.22
EDRF1-212ENST00000527655 KCNA4P22459 653 aa22.57■■□□□ 1.2
EDRF1-212ENST00000527655 C1QBPQ07021 282 aaKnown RBP22.47■■□□□ 1.19
EDRF1-212ENST00000527655 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.36■■□□□ 1.174e-7■■■■□ 22.7
EDRF1-212ENST00000527655 U3KPZ7 1027 aaPredicted RBP22.01■■□□□ 1.11
EDRF1-212ENST00000527655 SLC4A2P04920 1241 aa21.91■■□□□ 1.1
EDRF1-212ENST00000527655 SPINK5Q9NQ38 1064 aaPredicted RBP21.68■■□□□ 1.06
EDRF1-212ENST00000527655 CAPN15O75808 1086 aa21.53■■□□□ 1.04
EDRF1-212ENST00000527655 DSG3P32926 999 aa21.46■■□□□ 1.03
EDRF1-212ENST00000527655 SLC4A1APQ9BWU0 796 aaKnown RBP21.24■□□□□ 0.99
EDRF1-212ENST00000527655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.23■□□□□ 0.99
EDRF1-212ENST00000527655 HNRNPUL2Q1KMD3 747 aaKnown RBP21.23■□□□□ 0.99
EDRF1-212ENST00000527655 TRHP20396 242 aaPredicted RBP21.22■□□□□ 0.99
EDRF1-212ENST00000527655 APLP2Q06481 763 aa21.18■□□□□ 0.98
EDRF1-212ENST00000527655 SAMD1Q6SPF0 538 aaPredicted RBP21.16■□□□□ 0.98
EDRF1-212ENST00000527655 ZNF219Q9P2Y4 722 aaPredicted RBP21.14■□□□□ 0.97
EDRF1-212ENST00000527655 MYCNP04198 464 aaPredicted RBP21.11■□□□□ 0.97
EDRF1-212ENST00000527655 ABCB7O75027 752 aa21.1■□□□□ 0.97
EDRF1-212ENST00000527655 FOXD4L1Q9NU39 408 aa20.95■□□□□ 0.94
EDRF1-212ENST00000527655 ZBTB22O15209 634 aa20.83■□□□□ 0.93
EDRF1-212ENST00000527655 ATF5Q9Y2D1 282 aaPredicted RBP20.76■□□□□ 0.91
EDRF1-212ENST00000527655 POLA2Q14181 598 aa20.69■□□□□ 0.9
EDRF1-212ENST00000527655 POTEHQ6S545 545 aa20.37■□□□□ 0.85
EDRF1-212ENST00000527655 RBM42Q9BTD8 480 aaKnown RBP20.34■□□□□ 0.85
EDRF1-212ENST00000527655 ATXN8OSP0DMR3 200 aa20.27■□□□□ 0.84
EDRF1-212ENST00000527655 ZBTB12Q9Y330 459 aaPredicted RBP20.17■□□□□ 0.82
EDRF1-212ENST00000527655 OSCARQ8IYS5 282 aa20.06■□□□□ 0.8
EDRF1-212ENST00000527655 CHRDL2Q6WN34 429 aa19.95■□□□□ 0.78
EDRF1-212ENST00000527655 AKT1S1Q96B36 256 aa19.95■□□□□ 0.78
EDRF1-212ENST00000527655 CSRNP3Q8WYN3 585 aa19.89■□□□□ 0.77
EDRF1-212ENST00000527655 REM2Q8IYK8 340 aaPredicted RBP19.82■□□□□ 0.76
EDRF1-212ENST00000527655 MKRN4PQ13434 485 aaPredicted RBP19.8■□□□□ 0.76
EDRF1-212ENST00000527655 FBLN2P98095 1184 aa19.73■□□□□ 0.75
EDRF1-212ENST00000527655 SPDYE2BA6NHP3 402 aa19.63■□□□□ 0.73
EDRF1-212ENST00000527655 PITPNM1O00562 1244 aa19.63■□□□□ 0.73
EDRF1-212ENST00000527655 SPDYE6P0CI01 402 aa19.63■□□□□ 0.73
EDRF1-212ENST00000527655 SPDYE2Q495Y8 402 aa19.63■□□□□ 0.73
EDRF1-212ENST00000527655 EHMT2Q96KQ7 1210 aa19.63■□□□□ 0.73
EDRF1-212ENST00000527655 PIP4P2Q8N4L2 257 aa19.54■□□□□ 0.72
EDRF1-212ENST00000527655 SSUH2Q9Y2M2 353 aa19.45■□□□□ 0.7
EDRF1-212ENST00000527655 FXR2P51116 673 aaKnown RBP eCLIP19.43■□□□□ 0.7
EDRF1-212ENST00000527655 ZNF692Q9BU19 519 aaPredicted RBP19.4■□□□□ 0.7
EDRF1-212ENST00000527655 SPDYE1Q8NFV5 336 aaPredicted RBP19.23■□□□□ 0.67
EDRF1-212ENST00000527655 CLEC11AQ9Y240 323 aa19.22■□□□□ 0.67
EDRF1-212ENST00000527655 PABPN1Q86U42 306 aaKnown RBP eCLIP19.16■□□□□ 0.66
EDRF1-212ENST00000527655 SP7Q8TDD2 431 aaPredicted RBP19.13■□□□□ 0.65
EDRF1-212ENST00000527655 PRKAR2AP13861 404 aaKnown RBP19.08■□□□□ 0.64
EDRF1-212ENST00000527655 HAX1O00165 279 aa19.07■□□□□ 0.64
EDRF1-212ENST00000527655 EVX2Q03828 476 aa19.01■□□□□ 0.63
EDRF1-212ENST00000527655 CHADLQ6NUI6 762 aa18.93■□□□□ 0.62
EDRF1-212ENST00000527655 PRR29P0C7W0 189 aa18.9■□□□□ 0.62
EDRF1-212ENST00000527655 C19orf67A6NJJ6 358 aa18.81■□□□□ 0.6
EDRF1-212ENST00000527655 SPDYE4A6NLX3 237 aa18.79■□□□□ 0.6
EDRF1-212ENST00000527655 FARP1Q9Y4F1 1045 aaPredicted RBP18.61■□□□□ 0.57
EDRF1-212ENST00000527655 CREBZFQ9NS37 354 aa18.56■□□□□ 0.56
EDRF1-212ENST00000527655 STAG3Q9UJ98 1225 aa18.55■□□□□ 0.56
EDRF1-212ENST00000527655 GABBR2O75899 941 aa18.5■□□□□ 0.55
EDRF1-212ENST00000527655 CD44P16070 742 aaKnown RBP18.46■□□□□ 0.55
EDRF1-212ENST00000527655 PROM2Q8N271 834 aa18.45■□□□□ 0.54
EDRF1-212ENST00000527655 MNX1P50219 401 aaPredicted RBP18.3■□□□□ 0.52
EDRF1-212ENST00000527655 ZNF579Q8NAF0 562 aaKnown RBP18.21■□□□□ 0.51
EDRF1-212ENST00000527655 ZRANB1Q9UGI0 708 aa18.21■□□□□ 0.51
EDRF1-212ENST00000527655 POTEIP0CG38 1075 aa18.19■□□□□ 0.5
EDRF1-212ENST00000527655 CLCN6P51797 869 aa18.08■□□□□ 0.48
EDRF1-212ENST00000527655 NPM1P06748 294 aaKnown RBP eCLIP18.07■□□□□ 0.48
EDRF1-212ENST00000527655 PHF12Q96QT6 1004 aa18.03■□□□□ 0.48
EDRF1-212ENST00000527655 GALR2O43603 387 aaPredicted RBP18.02■□□□□ 0.48
EDRF1-212ENST00000527655 FKBP8Q14318 412 aa17.97■□□□□ 0.47
EDRF1-212ENST00000527655 PAK3O75914 559 aaPredicted RBP17.96■□□□□ 0.47
EDRF1-212ENST00000527655 LHX8Q68G74 356 aa17.93■□□□□ 0.46
EDRF1-212ENST00000527655 DCBLD2Q96PD2 775 aa17.91■□□□□ 0.46
EDRF1-212ENST00000527655 MIER1Q8N108 512 aa17.87■□□□□ 0.45
EDRF1-212ENST00000527655 TSPYL2Q9H2G4 693 aaPredicted RBP17.83■□□□□ 0.44
EDRF1-212ENST00000527655 CCDC61Q9Y6R9 512 aa17.8■□□□□ 0.44
EDRF1-212ENST00000527655 MS4A3Q96HJ5 214 aa17.79■□□□□ 0.44
EDRF1-212ENST00000527655 RASEFQ8IZ41 740 aa17.76■□□□□ 0.43
EDRF1-212ENST00000527655 PLCD3Q8N3E9 789 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms