RNA–Protein interactions for RNA: ENST00000475057.5

SUPT3H-205, Transcript of SPT3 homolog, SAGA and STAGA complex component, humanhuman

TSL 2

Gene SUPT3H, Length 1,377 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3H-205ENST00000475057 CHIC1Q5VXU3 224 aa18.67■□□□□ 0.58
SUPT3H-205ENST00000475057 AEBP2Q6ZN18 517 aaPredicted RBP18.47■□□□□ 0.55
SUPT3H-205ENST00000475057 PHF23Q9BUL5 403 aaPredicted RBP16.4■□□□□ 0.22
SUPT3H-205ENST00000475057 SENP3Q9H4L4 574 aaPredicted RBP15.72■□□□□ 0.11
SUPT3H-205ENST00000475057 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.07
SUPT3H-205ENST00000475057 NISCHQ9Y2I1 1504 aa15.18■□□□□ 0.02
SUPT3H-205ENST00000475057 FOXD1Q16676 465 aa14.43□□□□□ -0.1
SUPT3H-205ENST00000475057 EHMT2Q96KQ7 1210 aa14.34□□□□□ -0.11
SUPT3H-205ENST00000475057 ADRA2BP18089 450 aa14.33□□□□□ -0.12
SUPT3H-205ENST00000475057 ABCC9O60706 1549 aa14.3□□□□□ -0.12
SUPT3H-205ENST00000475057 PPP6R1Q9UPN7 881 aa14.27□□□□□ -0.12
SUPT3H-205ENST00000475057 KCNA4P22459 653 aa14.09□□□□□ -0.15
SUPT3H-205ENST00000475057 DNAJC5BQ9UF47 199 aa13.89□□□□□ -0.19
SUPT3H-205ENST00000475057 PIAS4Q8N2W9 510 aaPredicted RBP13.79□□□□□ -0.2
SUPT3H-205ENST00000475057 CCDC180Q9P1Z9 1646 aa13.75□□□□□ -0.21
SUPT3H-205ENST00000475057 CSRNP3Q8WYN3 585 aa13.68□□□□□ -0.22
SUPT3H-205ENST00000475057 PPP4R3CPQ6ZMV5 832 aa13.64□□□□□ -0.23
SUPT3H-205ENST00000475057 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
SUPT3H-205ENST00000475057 NCBP3Q53F19 620 aaKnown RBP13.54□□□□□ -0.24
SUPT3H-205ENST00000475057 RB1CC1Q8TDY2 1594 aa13.33□□□□□ -0.28
SUPT3H-205ENST00000475057 PABPN1Q86U42 306 aaKnown RBP eCLIP13.31□□□□□ -0.28
SUPT3H-205ENST00000475057 SCAF1Q9H7N4 1312 aaKnown RBP13.25□□□□□ -0.29
SUPT3H-205ENST00000475057 SLC24A1O60721 1099 aa13.23□□□□□ -0.29
SUPT3H-205ENST00000475057 NPM3O75607 178 aaKnown RBP13.23□□□□□ -0.29
SUPT3H-205ENST00000475057 MSH5O43196 834 aa13.2□□□□□ -0.3
SUPT3H-205ENST00000475057 CNKSR2Q8WXI2 1034 aa13.18□□□□□ -0.3
SUPT3H-205ENST00000475057 DCAF8L2P0C7V8 631 aa13.13□□□□□ -0.31
SUPT3H-205ENST00000475057 NACADO15069 1562 aa13.12□□□□□ -0.31
SUPT3H-205ENST00000475057 UNC13AQ9UPW8 1703 aa13.1□□□□□ -0.31
SUPT3H-205ENST00000475057 ZBTB22O15209 634 aa13.02□□□□□ -0.33
SUPT3H-205ENST00000475057 BICRAQ9NZM4 1560 aa13.02□□□□□ -0.33
SUPT3H-205ENST00000475057 DNAJC5Q9H3Z4 198 aa13□□□□□ -0.33
SUPT3H-205ENST00000475057 RTN4Q9NQC3 1192 aaKnown RBP12.95□□□□□ -0.34
SUPT3H-205ENST00000475057 CECR2Q9BXF3 1484 aa12.9□□□□□ -0.34
SUPT3H-205ENST00000475057 CC2D2AQ9P2K1 1620 aa12.87□□□□□ -0.35
SUPT3H-205ENST00000475057 AMER1Q5JTC6 1135 aaPredicted RBP12.86□□□□□ -0.35
SUPT3H-205ENST00000475057 MAPK8IP2Q13387 824 aaPredicted RBP12.8□□□□□ -0.36
SUPT3H-205ENST00000475057 RNF216Q9NWF9 866 aaPredicted RBP12.78□□□□□ -0.36
SUPT3H-205ENST00000475057 MYO15BQ96JP2 1530 aa12.75□□□□□ -0.37
SUPT3H-205ENST00000475057 FOXD4L1Q9NU39 408 aa12.71□□□□□ -0.37
SUPT3H-205ENST00000475057 EIF4G1Q04637 1599 aaKnown RBP12.71□□□□□ -0.38
SUPT3H-205ENST00000475057 SHROOM4Q9ULL8 1493 aa12.66□□□□□ -0.38
SUPT3H-205ENST00000475057 SCRIBQ14160 1630 aa12.6□□□□□ -0.39
SUPT3H-205ENST00000475057 DMRT2Q9Y5R5 561 aa12.59□□□□□ -0.39
SUPT3H-205ENST00000475057 HOXD11P31277 338 aaPredicted RBP12.56□□□□□ -0.4
SUPT3H-205ENST00000475057 ZCCHC6Q5VYS8 1495 aaKnown RBP12.5□□□□□ -0.41
SUPT3H-205ENST00000475057 DCAF1Q9Y4B6 1507 aa12.44□□□□□ -0.42
SUPT3H-205ENST00000475057 CUX2O14529 1486 aa12.42□□□□□ -0.42
SUPT3H-205ENST00000475057 ERCC6Q03468 1493 aa12.34□□□□□ -0.43
SUPT3H-205ENST00000475057 SLC4A2P04920 1241 aa12.32□□□□□ -0.44
SUPT3H-205ENST00000475057 SUPT5HO00267 1087 aaKnown RBP12.31□□□□□ -0.44
SUPT3H-205ENST00000475057 FKBP8Q14318 412 aa12.31□□□□□ -0.44
SUPT3H-205ENST00000475057 TRIM41Q8WV44 630 aa12.3□□□□□ -0.44
SUPT3H-205ENST00000475057 MYCNP04198 464 aaPredicted RBP12.28□□□□□ -0.44
SUPT3H-205ENST00000475057 ATXN8OSP0DMR3 200 aa12.27□□□□□ -0.45
SUPT3H-205ENST00000475057 HRCP23327 699 aa12.18□□□□□ -0.46
SUPT3H-205ENST00000475057 NESP48681 1621 aa12.18□□□□□ -0.46
SUPT3H-205ENST00000475057 NCAPD3P42695 1498 aa12.14□□□□□ -0.47
SUPT3H-205ENST00000475057 ATAD2BQ9ULI0 1458 aa12.07□□□□□ -0.48
SUPT3H-205ENST00000475057 THOC2Q8NI27 1593 aaKnown RBP12.07□□□□□ -0.48
SUPT3H-205ENST00000475057 DCAF8L1A6NGE4 600 aa12.03□□□□□ -0.48
SUPT3H-205ENST00000475057 SMARCA2P51531 1590 aa12.01□□□□□ -0.49
SUPT3H-205ENST00000475057 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.99□□□□□ -0.491e-6■■□□□ 11.5
SUPT3H-205ENST00000475057 HMGXB3Q12766 1538 aa11.99□□□□□ -0.49
SUPT3H-205ENST00000475057 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.98□□□□□ -0.49
SUPT3H-205ENST00000475057 HNRNPUL2Q1KMD3 747 aaKnown RBP11.98□□□□□ -0.49
SUPT3H-205ENST00000475057 KIF21AQ7Z4S6 1674 aa11.97□□□□□ -0.49
SUPT3H-205ENST00000475057 SMARCA4P51532 1647 aa11.93□□□□□ -0.5
SUPT3H-205ENST00000475057 SAMD1Q6SPF0 538 aaPredicted RBP11.92□□□□□ -0.5
SUPT3H-205ENST00000475057 LAMC3Q9Y6N6 1575 aa11.92□□□□□ -0.5
SUPT3H-205ENST00000475057 BAZ1BQ9UIG0 1483 aaKnown RBP11.92□□□□□ -0.5
SUPT3H-205ENST00000475057 PCGF6Q9BYE7 350 aa11.92□□□□□ -0.5
SUPT3H-205ENST00000475057 PDS5BQ9NTI5 1447 aa11.88□□□□□ -0.51
SUPT3H-205ENST00000475057 PLCB2Q00722 1185 aa11.85□□□□□ -0.51
SUPT3H-205ENST00000475057 OSCARQ8IYS5 282 aa11.85□□□□□ -0.51
SUPT3H-205ENST00000475057 BAZ1AQ9NRL2 1556 aaPredicted RBP11.85□□□□□ -0.51
SUPT3H-205ENST00000475057 ZEB1P37275 1124 aaPredicted RBP11.83□□□□□ -0.52
SUPT3H-205ENST00000475057 MRC2Q9UBG0 1479 aa11.81□□□□□ -0.52
SUPT3H-205ENST00000475057 TRIM26Q12899 539 aaPredicted RBP11.81□□□□□ -0.52
SUPT3H-205ENST00000475057 U3KPZ7 1027 aaPredicted RBP11.8□□□□□ -0.52
SUPT3H-205ENST00000475057 WDR62O43379 1518 aa11.79□□□□□ -0.52
SUPT3H-205ENST00000475057 ATF5Q9Y2D1 282 aaPredicted RBP11.79□□□□□ -0.52
SUPT3H-205ENST00000475057 CADPSQ9ULU8 1353 aa11.78□□□□□ -0.52
SUPT3H-205ENST00000475057 PEG3Q9GZU2 1588 aa11.78□□□□□ -0.52
SUPT3H-205ENST00000475057 APLP2Q06481 763 aa11.76□□□□□ -0.53
SUPT3H-205ENST00000475057 MROH2BQ7Z745 1585 aa11.74□□□□□ -0.53
SUPT3H-205ENST00000475057 RIMBP3CA6NJZ7 1639 aa11.74□□□□□ -0.53
SUPT3H-205ENST00000475057 RIMBP3BA6NNM3 1639 aa11.74□□□□□ -0.53
SUPT3H-205ENST00000475057 RIMBP3Q9UFD9 1639 aa11.74□□□□□ -0.53
SUPT3H-205ENST00000475057 PRKCSHP14314 528 aaPredicted RBP11.73□□□□□ -0.53
SUPT3H-205ENST00000475057 LOC105371045A0A1W2PR82 267 aa11.72□□□□□ -0.53
SUPT3H-205ENST00000475057 PELP1Q8IZL8 1130 aaKnown RBP11.72□□□□□ -0.53
SUPT3H-205ENST00000475057 HAP1P54257 671 aaPredicted RBP11.7□□□□□ -0.54
SUPT3H-205ENST00000475057 CEP164Q9UPV0 1460 aa11.68□□□□□ -0.54
SUPT3H-205ENST00000475057 PPARGC1BQ86YN6 1023 aaKnown RBP11.67□□□□□ -0.54
SUPT3H-205ENST00000475057 BCANQ96GW7 911 aa11.67□□□□□ -0.54
SUPT3H-205ENST00000475057 RSF1Q96T23 1441 aaPredicted RBP11.67□□□□□ -0.54
SUPT3H-205ENST00000475057 TRHP20396 242 aaPredicted RBP11.66□□□□□ -0.54
SUPT3H-205ENST00000475057 CYB5RLQ6IPT4 315 aa11.65□□□□□ -0.55
SUPT3H-205ENST00000475057 FANCD2Q9BXW9 1451 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms