RNA–Protein interactions for RNA: ENST00000371460.5

SUPT3H-203, Transcript of SPT3 homolog, SAGA and STAGA complex component, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SUPT3H, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3H-203ENST00000371460 AEBP2Q6ZN18 517 aaPredicted RBP16.64■□□□□ 0.25
SUPT3H-203ENST00000371460 CHIC1Q5VXU3 224 aa16.61■□□□□ 0.25
SUPT3H-203ENST00000371460 PHF23Q9BUL5 403 aaPredicted RBP14.55□□□□□ -0.08
SUPT3H-203ENST00000371460 SENP3Q9H4L4 574 aaPredicted RBP14.23□□□□□ -0.13
SUPT3H-203ENST00000371460 PLPPR3Q6T4P5 718 aa13.66□□□□□ -0.22
SUPT3H-203ENST00000371460 FOXD1Q16676 465 aa13.07□□□□□ -0.32
SUPT3H-203ENST00000371460 ADRA2BP18089 450 aa12.78□□□□□ -0.36
SUPT3H-203ENST00000371460 PPP6R1Q9UPN7 881 aa12.74□□□□□ -0.37
SUPT3H-203ENST00000371460 PIAS4Q8N2W9 510 aaPredicted RBP12.44□□□□□ -0.42
SUPT3H-203ENST00000371460 MSH5O43196 834 aa12.07□□□□□ -0.48
SUPT3H-203ENST00000371460 PPP4R3CPQ6ZMV5 832 aa12.03□□□□□ -0.48
SUPT3H-203ENST00000371460 KCNA4P22459 653 aa11.98□□□□□ -0.49
SUPT3H-203ENST00000371460 NISCHQ9Y2I1 1504 aa11.9□□□□□ -0.5
SUPT3H-203ENST00000371460 NCBP3Q53F19 620 aaKnown RBP11.9□□□□□ -0.51
SUPT3H-203ENST00000371460 SCAF1Q9H7N4 1312 aaKnown RBP11.87□□□□□ -0.51
SUPT3H-203ENST00000371460 CNKSR2Q8WXI2 1034 aa11.68□□□□□ -0.54
SUPT3H-203ENST00000371460 POTEDQ86YR6 584 aa11.59□□□□□ -0.55
SUPT3H-203ENST00000371460 NPM3O75607 178 aaKnown RBP11.59□□□□□ -0.55
SUPT3H-203ENST00000371460 SLC4A1APQ9BWU0 796 aaKnown RBP11.54□□□□□ -0.56
SUPT3H-203ENST00000371460 MAPK8IP2Q13387 824 aaPredicted RBP11.49□□□□□ -0.57
SUPT3H-203ENST00000371460 EHMT2Q96KQ7 1210 aa11.45□□□□□ -0.58
SUPT3H-203ENST00000371460 RNF216Q9NWF9 866 aaPredicted RBP11.37□□□□□ -0.59
SUPT3H-203ENST00000371460 DMRT2Q9Y5R5 561 aa11.36□□□□□ -0.59
SUPT3H-203ENST00000371460 DNAJC5BQ9UF47 199 aa11.28□□□□□ -0.6
SUPT3H-203ENST00000371460 HOXD11P31277 338 aaPredicted RBP11.23□□□□□ -0.61
SUPT3H-203ENST00000371460 CSRNP3Q8WYN3 585 aa11.18□□□□□ -0.62
SUPT3H-203ENST00000371460 FOXD4L1Q9NU39 408 aa11.03□□□□□ -0.64
SUPT3H-203ENST00000371460 ZBTB22O15209 634 aa10.98□□□□□ -0.65
SUPT3H-203ENST00000371460 CCDC180Q9P1Z9 1646 aa10.88□□□□□ -0.67
SUPT3H-203ENST00000371460 DCAF8L1A6NGE4 600 aa10.87□□□□□ -0.67
SUPT3H-203ENST00000371460 SLC4A2P04920 1241 aa10.84□□□□□ -0.67
SUPT3H-203ENST00000371460 ABCC9O60706 1549 aa10.82□□□□□ -0.68
SUPT3H-203ENST00000371460 MYCNP04198 464 aaPredicted RBP10.77□□□□□ -0.69
SUPT3H-203ENST00000371460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.75□□□□□ -0.691e-6■■□□□ 11.5
SUPT3H-203ENST00000371460 ATXN8OSP0DMR3 200 aa10.69□□□□□ -0.7
SUPT3H-203ENST00000371460 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.63□□□□□ -0.71
SUPT3H-203ENST00000371460 HNRNPUL2Q1KMD3 747 aaKnown RBP10.63□□□□□ -0.71
SUPT3H-203ENST00000371460 SAMD1Q6SPF0 538 aaPredicted RBP10.57□□□□□ -0.72
SUPT3H-203ENST00000371460 U3KPZ7 1027 aaPredicted RBP10.52□□□□□ -0.73
SUPT3H-203ENST00000371460 APLP2Q06481 763 aa10.51□□□□□ -0.73
SUPT3H-203ENST00000371460 RB1CC1Q8TDY2 1594 aa10.39□□□□□ -0.75
SUPT3H-203ENST00000371460 ATF5Q9Y2D1 282 aaPredicted RBP10.33□□□□□ -0.76
SUPT3H-203ENST00000371460 RNF39Q9H2S5 420 aa10.3□□□□□ -0.76
SUPT3H-203ENST00000371460 NACADO15069 1562 aa10.3□□□□□ -0.76
SUPT3H-203ENST00000371460 C1QBPQ07021 282 aaKnown RBP10.26□□□□□ -0.77
SUPT3H-203ENST00000371460 ZNF219Q9P2Y4 722 aaPredicted RBP10.25□□□□□ -0.77
SUPT3H-203ENST00000371460 MYO15BQ96JP2 1530 aa10.16□□□□□ -0.78
SUPT3H-203ENST00000371460 CAPN15O75808 1086 aa10.15□□□□□ -0.78
SUPT3H-203ENST00000371460 TRHP20396 242 aaPredicted RBP10.15□□□□□ -0.79
SUPT3H-203ENST00000371460 FKBP8Q14318 412 aa10.14□□□□□ -0.79
SUPT3H-203ENST00000371460 UNC13AQ9UPW8 1703 aa10.12□□□□□ -0.79
SUPT3H-203ENST00000371460 SPINK5Q9NQ38 1064 aaPredicted RBP10.12□□□□□ -0.79
SUPT3H-203ENST00000371460 FBLN2P98095 1184 aa10.06□□□□□ -0.8
SUPT3H-203ENST00000371460 SHROOM4Q9ULL8 1493 aa10.05□□□□□ -0.8
SUPT3H-203ENST00000371460 POLA2Q14181 598 aa10.04□□□□□ -0.8
SUPT3H-203ENST00000371460 BICRAQ9NZM4 1560 aa10.02□□□□□ -0.81
SUPT3H-203ENST00000371460 ZBTB12Q9Y330 459 aaPredicted RBP10.01□□□□□ -0.81
SUPT3H-203ENST00000371460 PABPN1Q86U42 306 aaKnown RBP eCLIP9.97□□□□□ -0.81
SUPT3H-203ENST00000371460 DCAF1Q9Y4B6 1507 aa9.93□□□□□ -0.82
SUPT3H-203ENST00000371460 ABCB7O75027 752 aa9.93□□□□□ -0.82
SUPT3H-203ENST00000371460 MKRN4PQ13434 485 aaPredicted RBP9.92□□□□□ -0.82
SUPT3H-203ENST00000371460 DCAF8L2P0C7V8 631 aa9.91□□□□□ -0.82
SUPT3H-203ENST00000371460 SPDYE4A6NLX3 237 aa9.9□□□□□ -0.82
SUPT3H-203ENST00000371460 CACNB1Q02641 598 aaPredicted RBP9.88□□□□□ -0.83
SUPT3H-203ENST00000371460 DSG3P32926 999 aa9.88□□□□□ -0.83
SUPT3H-203ENST00000371460 CC2D2AQ9P2K1 1620 aa9.85□□□□□ -0.83
SUPT3H-203ENST00000371460 FBXO3Q9UK99 471 aa9.82□□□□□ -0.84
SUPT3H-203ENST00000371460 ZCCHC6Q5VYS8 1495 aaKnown RBP9.82□□□□□ -0.84
SUPT3H-203ENST00000371460 CECR2Q9BXF3 1484 aa9.82□□□□□ -0.84
SUPT3H-203ENST00000371460 EIF4G1Q04637 1599 aaKnown RBP9.8□□□□□ -0.84
SUPT3H-203ENST00000371460 AMER1Q5JTC6 1135 aaPredicted RBP9.78□□□□□ -0.84
SUPT3H-203ENST00000371460 PROM2Q8N271 834 aa9.74□□□□□ -0.85
SUPT3H-203ENST00000371460 SCRIBQ14160 1630 aa9.71□□□□□ -0.86
SUPT3H-203ENST00000371460 SPDYE2BA6NHP3 402 aa9.71□□□□□ -0.86
SUPT3H-203ENST00000371460 SPDYE6P0CI01 402 aa9.71□□□□□ -0.86
SUPT3H-203ENST00000371460 SPDYE2Q495Y8 402 aa9.71□□□□□ -0.86
SUPT3H-203ENST00000371460 ZNF692Q9BU19 519 aaPredicted RBP9.7□□□□□ -0.86
SUPT3H-203ENST00000371460 DNAJC5Q9H3Z4 198 aa9.67□□□□□ -0.86
SUPT3H-203ENST00000371460 OSCARQ8IYS5 282 aa9.65□□□□□ -0.86
SUPT3H-203ENST00000371460 RTN4Q9NQC3 1192 aaKnown RBP9.62□□□□□ -0.87
SUPT3H-203ENST00000371460 SSUH2Q9Y2M2 353 aa9.6□□□□□ -0.87
SUPT3H-203ENST00000371460 VASPP50552 380 aaPredicted RBP9.58□□□□□ -0.88
SUPT3H-203ENST00000371460 STAG3Q9UJ98 1225 aa9.57□□□□□ -0.88
SUPT3H-203ENST00000371460 CUX2O14529 1486 aa9.56□□□□□ -0.88
SUPT3H-203ENST00000371460 RBM42Q9BTD8 480 aaKnown RBP9.51□□□□□ -0.89
SUPT3H-203ENST00000371460 PELP1Q8IZL8 1130 aaKnown RBP9.48□□□□□ -0.89
SUPT3H-203ENST00000371460 NCAPD3P42695 1498 aa9.46□□□□□ -0.89
SUPT3H-203ENST00000371460 PLEKHG5O94827 1062 aa9.43□□□□□ -0.9
SUPT3H-203ENST00000371460 IFNLR1Q8IU57 520 aaPredicted RBP9.43□□□□□ -0.9
SUPT3H-203ENST00000371460 AKT1S1Q96B36 256 aa9.43□□□□□ -0.9
SUPT3H-203ENST00000371460 PLCD3Q8N3E9 789 aa9.42□□□□□ -0.9
SUPT3H-203ENST00000371460 KLHL34Q8N239 644 aa9.42□□□□□ -0.9
SUPT3H-203ENST00000371460 HMGXB3Q12766 1538 aa9.41□□□□□ -0.9
SUPT3H-203ENST00000371460 ERCC6Q03468 1493 aa9.41□□□□□ -0.9
SUPT3H-203ENST00000371460 MIER1Q8N108 512 aa9.4□□□□□ -0.9
SUPT3H-203ENST00000371460 SMARCA2P51531 1590 aa9.4□□□□□ -0.9
SUPT3H-203ENST00000371460 MYT1Q01538 1121 aa9.38□□□□□ -0.91
SUPT3H-203ENST00000371460 SPDYE1Q8NFV5 336 aaPredicted RBP9.37□□□□□ -0.91
SUPT3H-203ENST00000371460 ZBTB47Q9UFB7 747 aaPredicted RBP9.37□□□□□ -0.91
SUPT3H-203ENST00000371460 SPOCK2Q92563 424 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms