RNA–Protein interactions for RNA: ENST00000371459.5

SUPT3H-202, Transcript of SPT3 homolog, SAGA and STAGA complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SUPT3H, Length 2,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3H-202ENST00000371459 CHIC1Q5VXU3 224 aa21.24■□□□□ 0.99
SUPT3H-202ENST00000371459 AEBP2Q6ZN18 517 aaPredicted RBP21.09■□□□□ 0.97
SUPT3H-202ENST00000371459 PHF23Q9BUL5 403 aaPredicted RBP18.73■□□□□ 0.59
SUPT3H-202ENST00000371459 SENP3Q9H4L4 574 aaPredicted RBP17.79■□□□□ 0.44
SUPT3H-202ENST00000371459 PLPPR3Q6T4P5 718 aa17.52■□□□□ 0.39
SUPT3H-202ENST00000371459 FOXD1Q16676 465 aa16.43■□□□□ 0.22
SUPT3H-202ENST00000371459 ADRA2BP18089 450 aa16.36■□□□□ 0.21
SUPT3H-202ENST00000371459 PPP6R1Q9UPN7 881 aa16.3■□□□□ 0.2
SUPT3H-202ENST00000371459 KCNA4P22459 653 aa15.86■□□□□ 0.13
SUPT3H-202ENST00000371459 PIAS4Q8N2W9 510 aaPredicted RBP15.63■□□□□ 0.09
SUPT3H-202ENST00000371459 PPP4R3CPQ6ZMV5 832 aa15.52■□□□□ 0.07
SUPT3H-202ENST00000371459 EHMT2Q96KQ7 1210 aa15.47■□□□□ 0.07
SUPT3H-202ENST00000371459 NCBP3Q53F19 620 aaKnown RBP15.29■□□□□ 0.04
SUPT3H-202ENST00000371459 SLC4A1APQ9BWU0 796 aaKnown RBP15.23■□□□□ 0.03
SUPT3H-202ENST00000371459 NPM3O75607 178 aaKnown RBP15.07■□□□□ 0
SUPT3H-202ENST00000371459 CSRNP3Q8WYN3 585 aa15.06■□□□□ 0
SUPT3H-202ENST00000371459 CNKSR2Q8WXI2 1034 aa14.95□□□□□ -0.02
SUPT3H-202ENST00000371459 SCAF1Q9H7N4 1312 aaKnown RBP14.95□□□□□ -0.02
SUPT3H-202ENST00000371459 MSH5O43196 834 aa14.91□□□□□ -0.02
SUPT3H-202ENST00000371459 DNAJC5BQ9UF47 199 aa14.62□□□□□ -0.07
SUPT3H-202ENST00000371459 ZBTB22O15209 634 aa14.61□□□□□ -0.07
SUPT3H-202ENST00000371459 MAPK8IP2Q13387 824 aaPredicted RBP14.61□□□□□ -0.07
SUPT3H-202ENST00000371459 RNF216Q9NWF9 866 aaPredicted RBP14.5□□□□□ -0.09
SUPT3H-202ENST00000371459 FOXD4L1Q9NU39 408 aa14.44□□□□□ -0.1
SUPT3H-202ENST00000371459 DMRT2Q9Y5R5 561 aa14.32□□□□□ -0.12
SUPT3H-202ENST00000371459 HOXD11P31277 338 aaPredicted RBP14.29□□□□□ -0.12
SUPT3H-202ENST00000371459 SLC4A2P04920 1241 aa14.08□□□□□ -0.16
SUPT3H-202ENST00000371459 MYCNP04198 464 aaPredicted RBP13.92□□□□□ -0.18
SUPT3H-202ENST00000371459 ATXN8OSP0DMR3 200 aa13.91□□□□□ -0.18
SUPT3H-202ENST00000371459 DCAF8L1A6NGE4 600 aa13.58□□□□□ -0.24
SUPT3H-202ENST00000371459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.56□□□□□ -0.241e-6■■□□□ 11.5
SUPT3H-202ENST00000371459 FKBP8Q14318 412 aa13.55□□□□□ -0.24
SUPT3H-202ENST00000371459 AMER1Q5JTC6 1135 aaPredicted RBP13.5□□□□□ -0.25
SUPT3H-202ENST00000371459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.49□□□□□ -0.25
SUPT3H-202ENST00000371459 HNRNPUL2Q1KMD3 747 aaKnown RBP13.49□□□□□ -0.25
SUPT3H-202ENST00000371459 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
SUPT3H-202ENST00000371459 ATF5Q9Y2D1 282 aaPredicted RBP13.48□□□□□ -0.25
SUPT3H-202ENST00000371459 RTN4Q9NQC3 1192 aaKnown RBP13.46□□□□□ -0.26
SUPT3H-202ENST00000371459 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
SUPT3H-202ENST00000371459 APLP2Q06481 763 aa13.22□□□□□ -0.29
SUPT3H-202ENST00000371459 SLC24A1O60721 1099 aa13.2□□□□□ -0.3
SUPT3H-202ENST00000371459 ZNF219Q9P2Y4 722 aaPredicted RBP13.2□□□□□ -0.3
SUPT3H-202ENST00000371459 SPDYE4A6NLX3 237 aa12.94□□□□□ -0.34
SUPT3H-202ENST00000371459 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
SUPT3H-202ENST00000371459 FBXO3Q9UK99 471 aa12.92□□□□□ -0.34
SUPT3H-202ENST00000371459 PROM2Q8N271 834 aa12.88□□□□□ -0.35
SUPT3H-202ENST00000371459 FBLN2P98095 1184 aa12.87□□□□□ -0.35
SUPT3H-202ENST00000371459 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
SUPT3H-202ENST00000371459 TRHP20396 242 aaPredicted RBP12.84□□□□□ -0.35
SUPT3H-202ENST00000371459 RNF39Q9H2S5 420 aa12.84□□□□□ -0.35
SUPT3H-202ENST00000371459 POLA2Q14181 598 aa12.8□□□□□ -0.36
SUPT3H-202ENST00000371459 CAPN15O75808 1086 aa12.76□□□□□ -0.37
SUPT3H-202ENST00000371459 C1QBPQ07021 282 aaKnown RBP12.73□□□□□ -0.37
SUPT3H-202ENST00000371459 VASPP50552 380 aaPredicted RBP12.72□□□□□ -0.37
SUPT3H-202ENST00000371459 ZBTB12Q9Y330 459 aaPredicted RBP12.68□□□□□ -0.38
SUPT3H-202ENST00000371459 IFNLR1Q8IU57 520 aaPredicted RBP12.59□□□□□ -0.39
SUPT3H-202ENST00000371459 ABCB7O75027 752 aa12.57□□□□□ -0.4
SUPT3H-202ENST00000371459 PLCB2Q00722 1185 aa12.44□□□□□ -0.42
SUPT3H-202ENST00000371459 POTEDQ86YR6 584 aa12.44□□□□□ -0.42
SUPT3H-202ENST00000371459 DSG3P32926 999 aa12.44□□□□□ -0.42
SUPT3H-202ENST00000371459 PKD2Q13563 968 aa12.42□□□□□ -0.42
SUPT3H-202ENST00000371459 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.42
SUPT3H-202ENST00000371459 SPDYE2BA6NHP3 402 aa12.39□□□□□ -0.43
SUPT3H-202ENST00000371459 SPDYE6P0CI01 402 aa12.39□□□□□ -0.43
SUPT3H-202ENST00000371459 SPDYE2Q495Y8 402 aa12.39□□□□□ -0.43
SUPT3H-202ENST00000371459 STAG3Q9UJ98 1225 aa12.38□□□□□ -0.43
SUPT3H-202ENST00000371459 SSUH2Q9Y2M2 353 aa12.37□□□□□ -0.43
SUPT3H-202ENST00000371459 SPOCK2Q92563 424 aa12.34□□□□□ -0.43
SUPT3H-202ENST00000371459 DCAF8L2P0C7V8 631 aa12.33□□□□□ -0.44
SUPT3H-202ENST00000371459 OSCARQ8IYS5 282 aa12.33□□□□□ -0.44
SUPT3H-202ENST00000371459 KLHL34Q8N239 644 aa12.31□□□□□ -0.44
SUPT3H-202ENST00000371459 PABPN1Q86U42 306 aaKnown RBP eCLIP12.26□□□□□ -0.45
SUPT3H-202ENST00000371459 HAP1P54257 671 aaPredicted RBP12.23□□□□□ -0.45
SUPT3H-202ENST00000371459 PLCD3Q8N3E9 789 aa12.23□□□□□ -0.45
SUPT3H-202ENST00000371459 ECM2O94769 699 aaPredicted RBP12.22□□□□□ -0.45
SUPT3H-202ENST00000371459 MIER1Q8N108 512 aa12.18□□□□□ -0.46
SUPT3H-202ENST00000371459 BBXQ8WY36 941 aaPredicted RBP12.15□□□□□ -0.46
SUPT3H-202ENST00000371459 VSIG10Q8N0Z9 540 aa12.12□□□□□ -0.47
SUPT3H-202ENST00000371459 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.11□□□□□ -0.47
SUPT3H-202ENST00000371459 NPM1P06748 294 aaKnown RBP eCLIP12.09□□□□□ -0.47
SUPT3H-202ENST00000371459 ZBTB47Q9UFB7 747 aaPredicted RBP12.09□□□□□ -0.47
SUPT3H-202ENST00000371459 RGL2O15211 777 aa12.08□□□□□ -0.48
SUPT3H-202ENST00000371459 PLEKHG5O94827 1062 aa12.07□□□□□ -0.48
SUPT3H-202ENST00000371459 CACNB1Q02641 598 aaPredicted RBP12.01□□□□□ -0.49
SUPT3H-202ENST00000371459 PAXIP1Q6ZW49 1069 aaPredicted RBP12.01□□□□□ -0.49
SUPT3H-202ENST00000371459 CIZ1Q9ULV3 898 aaPredicted RBP12.01□□□□□ -0.49
SUPT3H-202ENST00000371459 BCANQ96GW7 911 aa12□□□□□ -0.49
SUPT3H-202ENST00000371459 TRIM41Q8WV44 630 aa11.99□□□□□ -0.49
SUPT3H-202ENST00000371459 CFAP44Q96MT7 982 aa11.96□□□□□ -0.49
SUPT3H-202ENST00000371459 SPRYD3Q8NCJ5 442 aa11.93□□□□□ -0.5
SUPT3H-202ENST00000371459 KDM2AQ9Y2K7 1162 aa11.93□□□□□ -0.5
SUPT3H-202ENST00000371459 CHGAP10645 457 aaKnown RBP11.89□□□□□ -0.51
SUPT3H-202ENST00000371459 GSE1Q14687 1217 aa11.88□□□□□ -0.51
SUPT3H-202ENST00000371459 SPDYE1Q8NFV5 336 aaPredicted RBP11.86□□□□□ -0.51
SUPT3H-202ENST00000371459 NUBP1P53384 320 aa11.85□□□□□ -0.51
SUPT3H-202ENST00000371459 HS6ST3Q8IZP7 471 aa11.85□□□□□ -0.51
SUPT3H-202ENST00000371459 AKT1S1Q96B36 256 aa11.84□□□□□ -0.51
SUPT3H-202ENST00000371459 RBM42Q9BTD8 480 aaKnown RBP11.83□□□□□ -0.52
SUPT3H-202ENST00000371459 TSHZ2Q9NRE2 1034 aa11.82□□□□□ -0.52
SUPT3H-202ENST00000371459 DNAJC5Q9H3Z4 198 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms