RNA–Protein interactions for RNA: ENST00000419769.6

EDRF1-206, Transcript of erythroid differentiation regulatory factor 1, humanhuman

TSL 1 (best)

Gene EDRF1, Length 4,243 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDRF1-206ENST00000419769 NISCHQ9Y2I1 1504 aa23.89■■□□□ 1.42
EDRF1-206ENST00000419769 CCDC180Q9P1Z9 1646 aa20.92■□□□□ 0.94
EDRF1-206ENST00000419769 ZCCHC6Q5VYS8 1495 aaKnown RBP20.1■□□□□ 0.81
EDRF1-206ENST00000419769 DCAF8L2P0C7V8 631 aa19.91■□□□□ 0.78
EDRF1-206ENST00000419769 DCAF1Q9Y4B6 1507 aa19.79■□□□□ 0.76
EDRF1-206ENST00000419769 ABCC9O60706 1549 aa19.66■□□□□ 0.74
EDRF1-206ENST00000419769 MYO15BQ96JP2 1530 aa19.57■□□□□ 0.72
EDRF1-206ENST00000419769 NACADO15069 1562 aa19.39■□□□□ 0.69
EDRF1-206ENST00000419769 SHROOM4Q9ULL8 1493 aa19.26■□□□□ 0.67
EDRF1-206ENST00000419769 RB1CC1Q8TDY2 1594 aa19.2■□□□□ 0.66
EDRF1-206ENST00000419769 SCRIBQ14160 1630 aa19.16■□□□□ 0.66
EDRF1-206ENST00000419769 UNC13AQ9UPW8 1703 aa19.15■□□□□ 0.66
EDRF1-206ENST00000419769 SUPT5HO00267 1087 aaKnown RBP19.1■□□□□ 0.65
EDRF1-206ENST00000419769 BICRAQ9NZM4 1560 aa18.86■□□□□ 0.61
EDRF1-206ENST00000419769 PELP1Q8IZL8 1130 aaKnown RBP18.65■□□□□ 0.58
EDRF1-206ENST00000419769 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
EDRF1-206ENST00000419769 MROH2BQ7Z745 1585 aa18.5■□□□□ 0.55
EDRF1-206ENST00000419769 RSF1Q96T23 1441 aaPredicted RBP18.5■□□□□ 0.55
EDRF1-206ENST00000419769 PABPN1Q86U42 306 aaKnown RBP eCLIP18.47■□□□□ 0.55
EDRF1-206ENST00000419769 HRCP23327 699 aa18.45■□□□□ 0.54
EDRF1-206ENST00000419769 SMARCA4P51532 1647 aa18.41■□□□□ 0.54
EDRF1-206ENST00000419769 BAZ1AQ9NRL2 1556 aaPredicted RBP18.39■□□□□ 0.53
EDRF1-206ENST00000419769 EHMT2Q96KQ7 1210 aa18.38■□□□□ 0.53
EDRF1-206ENST00000419769 WIZO95785 1651 aa18.38■□□□□ 0.53
EDRF1-206ENST00000419769 PEG3Q9GZU2 1588 aa18.26■□□□□ 0.51
EDRF1-206ENST00000419769 PPARGC1BQ86YN6 1023 aaKnown RBP18.22■□□□□ 0.51
EDRF1-206ENST00000419769 EIF4G1Q04637 1599 aaKnown RBP18.16■□□□□ 0.5
EDRF1-206ENST00000419769 TOP2AP11388 1531 aaKnown RBP18.1■□□□□ 0.49
EDRF1-206ENST00000419769 MYT1Q01538 1121 aa18.09■□□□□ 0.49
EDRF1-206ENST00000419769 ATAD2BQ9ULI0 1458 aa18.06■□□□□ 0.48
EDRF1-206ENST00000419769 PCGF6Q9BYE7 350 aa18.06■□□□□ 0.48
EDRF1-206ENST00000419769 SMARCA2P51531 1590 aa17.99■□□□□ 0.47
EDRF1-206ENST00000419769 FAM9AQ8IZU1 332 aaPredicted RBP17.99■□□□□ 0.47
EDRF1-206ENST00000419769 HMGXB3Q12766 1538 aa17.92■□□□□ 0.46
EDRF1-206ENST00000419769 CC2D2AQ9P2K1 1620 aa17.91■□□□□ 0.46
EDRF1-206ENST00000419769 CCDC88BA6NC98 1476 aa17.91■□□□□ 0.46
EDRF1-206ENST00000419769 NCAPD3P42695 1498 aa17.91■□□□□ 0.46
EDRF1-206ENST00000419769 BAZ1BQ9UIG0 1483 aaKnown RBP17.86■□□□□ 0.45
EDRF1-206ENST00000419769 APLP2Q06481 763 aa17.8■□□□□ 0.44
EDRF1-206ENST00000419769 SCAF1Q9H7N4 1312 aaKnown RBP17.78■□□□□ 0.44
EDRF1-206ENST00000419769 TTBK1Q5TCY1 1321 aaPredicted RBP17.75■□□□□ 0.43
EDRF1-206ENST00000419769 CHIC1Q5VXU3 224 aa17.73■□□□□ 0.43
EDRF1-206ENST00000419769 TRIM41Q8WV44 630 aa17.62■□□□□ 0.41
EDRF1-206ENST00000419769 PRDM2Q13029 1718 aa17.57■□□□□ 0.4
EDRF1-206ENST00000419769 DNAJC5BQ9UF47 199 aa17.55■□□□□ 0.4
EDRF1-206ENST00000419769 ABCC8Q09428 1581 aa17.55■□□□□ 0.4
EDRF1-206ENST00000419769 RANGAP1P46060 587 aaPredicted RBP17.52■□□□□ 0.4
EDRF1-206ENST00000419769 CFTRP13569 1480 aa17.51■□□□□ 0.39
EDRF1-206ENST00000419769 SYNJ1O43426 1573 aa17.43■□□□□ 0.38
EDRF1-206ENST00000419769 CCER1Q8TC90 406 aaPredicted RBP17.39■□□□□ 0.37
EDRF1-206ENST00000419769 CADPSQ9ULU8 1353 aa17.37■□□□□ 0.37
EDRF1-206ENST00000419769 NESP48681 1621 aa17.36■□□□□ 0.37
EDRF1-206ENST00000419769 UBTFP17480 764 aaKnown RBP17.35■□□□□ 0.37
EDRF1-206ENST00000419769 BIVM-ERCC5R4GMW8 1640 aa17.35■□□□□ 0.37
EDRF1-206ENST00000419769 ZEB1P37275 1124 aaPredicted RBP17.33■□□□□ 0.37
EDRF1-206ENST00000419769 TOP2BQ02880 1626 aa17.32■□□□□ 0.36
EDRF1-206ENST00000419769 LAMC3Q9Y6N6 1575 aa17.31■□□□□ 0.36
EDRF1-206ENST00000419769 WRNQ14191 1432 aaPredicted RBP eCLIP17.3■□□□□ 0.36
EDRF1-206ENST00000419769 CUX1P39880 1505 aa17.3■□□□□ 0.36
EDRF1-206ENST00000419769 ATP1B4Q9UN42 357 aaPredicted RBP17.25■□□□□ 0.35
EDRF1-206ENST00000419769 KIF21AQ7Z4S6 1674 aa17.24■□□□□ 0.35
EDRF1-206ENST00000419769 GTF3C3Q9Y5Q9 886 aa17.22■□□□□ 0.35
EDRF1-206ENST00000419769 ACIN1Q9UKV3 1341 aaKnown RBP17.22■□□□□ 0.35
EDRF1-206ENST00000419769 CENPBP07199 599 aaPredicted RBP17.21■□□□□ 0.35
EDRF1-206ENST00000419769 FANCD2Q9BXW9 1451 aa17.2■□□□□ 0.34
EDRF1-206ENST00000419769 RUSC2Q8N2Y8 1516 aa17.18■□□□□ 0.34
EDRF1-206ENST00000419769 NEUROD1Q13562 356 aa17.17■□□□□ 0.34
EDRF1-206ENST00000419769 SOGA1O94964 1423 aa17.16■□□□□ 0.34
EDRF1-206ENST00000419769 TRIM26Q12899 539 aaPredicted RBP17.15■□□□□ 0.34
EDRF1-206ENST00000419769 LOC105371045A0A1W2PR82 267 aa17.11■□□□□ 0.33
EDRF1-206ENST00000419769 URB2Q14146 1524 aaKnown RBP17.1■□□□□ 0.33
EDRF1-206ENST00000419769 DNMBPQ6XZF7 1577 aa17.09■□□□□ 0.33
EDRF1-206ENST00000419769 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
EDRF1-206ENST00000419769 CEP164Q9UPV0 1460 aa17.06■□□□□ 0.32
EDRF1-206ENST00000419769 WDR97A6NE52 1622 aa17.04■□□□□ 0.32
EDRF1-206ENST00000419769 FGD5Q6ZNL6 1462 aa17.03■□□□□ 0.32
EDRF1-206ENST00000419769 PDS5BQ9NTI5 1447 aa17.02■□□□□ 0.31
EDRF1-206ENST00000419769 POLA1P09884 1462 aaPredicted RBP16.98■□□□□ 0.31
EDRF1-206ENST00000419769 YTHDC1Q96MU7 727 aaKnown RBP16.98■□□□□ 0.31
EDRF1-206ENST00000419769 THOC2Q8NI27 1593 aaKnown RBP16.97■□□□□ 0.31
EDRF1-206ENST00000419769 EEA1Q15075 1411 aa16.96■□□□□ 0.31
EDRF1-206ENST00000419769 TARBP1Q13395 1621 aaKnown RBP16.94■□□□□ 0.3
EDRF1-206ENST00000419769 KIF21BO75037 1637 aa16.93■□□□□ 0.3
EDRF1-206ENST00000419769 WDR62O43379 1518 aa16.92■□□□□ 0.3
EDRF1-206ENST00000419769 BCL11AQ9H165 835 aa16.91■□□□□ 0.3
EDRF1-206ENST00000419769 RAD54L2Q9Y4B4 1467 aa16.91■□□□□ 0.3
EDRF1-206ENST00000419769 ABCA10Q8WWZ4 1543 aa16.9■□□□□ 0.3
EDRF1-206ENST00000419769 MRC2Q9UBG0 1479 aa16.89■□□□□ 0.29
EDRF1-206ENST00000419769 CUX2O14529 1486 aa16.88■□□□□ 0.29
EDRF1-206ENST00000419769 ABCA5Q8WWZ7 1642 aa16.87■□□□□ 0.29
EDRF1-206ENST00000419769 PRXQ9BXM0 1461 aa16.86■□□□□ 0.29
EDRF1-206ENST00000419769 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
EDRF1-206ENST00000419769 ITGAEP38570 1179 aa16.82■□□□□ 0.28
EDRF1-206ENST00000419769 RAPGEF2Q9Y4G8 1499 aa16.81■□□□□ 0.28
EDRF1-206ENST00000419769 KIF27Q86VH2 1401 aa16.8■□□□□ 0.28
EDRF1-206ENST00000419769 ERICH3Q5RHP9 1530 aa16.79■□□□□ 0.28
EDRF1-206ENST00000419769 ERICH6Q7L0X2 663 aa16.78■□□□□ 0.28
EDRF1-206ENST00000419769 IGF1RP08069 1367 aa16.78■□□□□ 0.28
EDRF1-206ENST00000419769 HNRNPUL2Q1KMD3 747 aaKnown RBP16.78■□□□□ 0.28
EDRF1-206ENST00000419769 NEFLP07196 543 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms