RNA–Protein interactions for RNA: ENST00000446681.1

TRMT11-204, Transcript of tRNA methyltransferase 11 homolog, humanhuman

TSL 3

Gene TRMT11, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT11-204ENST00000446681 NISCHQ9Y2I1 1504 aa32.62■■■□□ 2.81
TRMT11-204ENST00000446681 AEBP2Q6ZN18 517 aaPredicted RBP30.04■■■□□ 2.4
TRMT11-204ENST00000446681 CCDC180Q9P1Z9 1646 aa28.74■■■□□ 2.19
TRMT11-204ENST00000446681 CHIC1Q5VXU3 224 aa28.16■■■□□ 2.1
TRMT11-204ENST00000446681 ABCC9O60706 1549 aa28.13■■■□□ 2.09
TRMT11-204ENST00000446681 DCAF8L2P0C7V8 631 aa27.45■■□□□ 1.98
TRMT11-204ENST00000446681 ZCCHC6Q5VYS8 1495 aaKnown RBP27.19■■□□□ 1.94
TRMT11-204ENST00000446681 NACADO15069 1562 aa27.11■■□□□ 1.93
TRMT11-204ENST00000446681 RB1CC1Q8TDY2 1594 aa27.08■■□□□ 1.93
TRMT11-204ENST00000446681 MYO15BQ96JP2 1530 aa27.02■■□□□ 1.92
TRMT11-204ENST00000446681 DCAF1Q9Y4B6 1507 aa26.97■■□□□ 1.91
TRMT11-204ENST00000446681 PABPN1Q86U42 306 aaKnown RBP eCLIP26.43■■□□□ 1.82
TRMT11-204ENST00000446681 SCRIBQ14160 1630 aa26.35■■□□□ 1.81
TRMT11-204ENST00000446681 BICRAQ9NZM4 1560 aa26.15■■□□□ 1.78
TRMT11-204ENST00000446681 UNC13AQ9UPW8 1703 aa26.14■■□□□ 1.78
TRMT11-204ENST00000446681 SHROOM4Q9ULL8 1493 aa26.04■■□□□ 1.76
TRMT11-204ENST00000446681 SENP3Q9H4L4 574 aaPredicted RBP25.77■■□□□ 1.72
TRMT11-204ENST00000446681 DNAJC5BQ9UF47 199 aa25.63■■□□□ 1.69
TRMT11-204ENST00000446681 EIF4G1Q04637 1599 aaKnown RBP25.52■■□□□ 1.68
TRMT11-204ENST00000446681 CECR2Q9BXF3 1484 aa25.4■■□□□ 1.66
TRMT11-204ENST00000446681 PHF23Q9BUL5 403 aaPredicted RBP25.36■■□□□ 1.65
TRMT11-204ENST00000446681 CC2D2AQ9P2K1 1620 aa25.34■■□□□ 1.65
TRMT11-204ENST00000446681 BAZ1AQ9NRL2 1556 aaPredicted RBP25.27■■□□□ 1.64
TRMT11-204ENST00000446681 SMARCA4P51532 1647 aa25.19■■□□□ 1.62
TRMT11-204ENST00000446681 MROH2BQ7Z745 1585 aa25.13■■□□□ 1.61
TRMT11-204ENST00000446681 ATAD2BQ9ULI0 1458 aa25.1■■□□□ 1.61
TRMT11-204ENST00000446681 NCAPD3P42695 1498 aa25.08■■□□□ 1.6
TRMT11-204ENST00000446681 SMARCA2P51531 1590 aa25.07■■□□□ 1.6
TRMT11-204ENST00000446681 RSF1Q96T23 1441 aaPredicted RBP25■■□□□ 1.59
TRMT11-204ENST00000446681 BAZ1BQ9UIG0 1483 aaKnown RBP24.94■■□□□ 1.58
TRMT11-204ENST00000446681 PEG3Q9GZU2 1588 aa24.93■■□□□ 1.58
TRMT11-204ENST00000446681 HMGXB3Q12766 1538 aa24.88■■□□□ 1.57
TRMT11-204ENST00000446681 WIZO95785 1651 aa24.78■■□□□ 1.56
TRMT11-204ENST00000446681 SUPT5HO00267 1087 aaKnown RBP24.7■■□□□ 1.54
TRMT11-204ENST00000446681 TOP2AP11388 1531 aaKnown RBP24.61■■□□□ 1.53
TRMT11-204ENST00000446681 CADPSQ9ULU8 1353 aa24.42■■□□□ 1.5
TRMT11-204ENST00000446681 CCDC88BA6NC98 1476 aa24.38■■□□□ 1.49
TRMT11-204ENST00000446681 NESP48681 1621 aa24.35■■□□□ 1.49
TRMT11-204ENST00000446681 ERCC6Q03468 1493 aa24.3■■□□□ 1.48
TRMT11-204ENST00000446681 LAMC3Q9Y6N6 1575 aa24.29■■□□□ 1.48
TRMT11-204ENST00000446681 PDS5BQ9NTI5 1447 aa24.28■■□□□ 1.48
TRMT11-204ENST00000446681 CFTRP13569 1480 aa24.25■■□□□ 1.47
TRMT11-204ENST00000446681 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.45
TRMT11-204ENST00000446681 CEP164Q9UPV0 1460 aa24.03■■□□□ 1.44
TRMT11-204ENST00000446681 FOXD1Q16676 465 aa24.03■■□□□ 1.44
TRMT11-204ENST00000446681 MRC2Q9UBG0 1479 aa23.94■■□□□ 1.42
TRMT11-204ENST00000446681 KIF21AQ7Z4S6 1674 aa23.88■■□□□ 1.41
TRMT11-204ENST00000446681 CUX2O14529 1486 aa23.87■■□□□ 1.41
TRMT11-204ENST00000446681 THOC2Q8NI27 1593 aaKnown RBP23.81■■□□□ 1.4
TRMT11-204ENST00000446681 WDR62O43379 1518 aa23.78■■□□□ 1.4
TRMT11-204ENST00000446681 URB2Q14146 1524 aaKnown RBP23.76■■□□□ 1.39
TRMT11-204ENST00000446681 ABCC8Q09428 1581 aa23.76■■□□□ 1.39
TRMT11-204ENST00000446681 PRDM2Q13029 1718 aa23.74■■□□□ 1.39
TRMT11-204ENST00000446681 TOPBP1Q92547 1522 aa23.68■■□□□ 1.38
TRMT11-204ENST00000446681 DNMBPQ6XZF7 1577 aa23.64■■□□□ 1.37
TRMT11-204ENST00000446681 WRNQ14191 1432 aaPredicted RBP eCLIP23.6■■□□□ 1.37
TRMT11-204ENST00000446681 CUX1P39880 1505 aa23.55■■□□□ 1.36
TRMT11-204ENST00000446681 IFT140Q96RY7 1462 aa23.54■■□□□ 1.36
TRMT11-204ENST00000446681 SOGA1O94964 1423 aa23.5■■□□□ 1.35
TRMT11-204ENST00000446681 POLA1P09884 1462 aaPredicted RBP23.49■■□□□ 1.35
TRMT11-204ENST00000446681 FGD5Q6ZNL6 1462 aa23.49■■□□□ 1.35
TRMT11-204ENST00000446681 RAD54L2Q9Y4B4 1467 aa23.43■■□□□ 1.34
TRMT11-204ENST00000446681 TOP2BQ02880 1626 aa23.38■■□□□ 1.33
TRMT11-204ENST00000446681 SYNJ1O43426 1573 aa23.37■■□□□ 1.33
TRMT11-204ENST00000446681 TDRD9Q8NDG6 1382 aaKnown RBP23.36■■□□□ 1.33
TRMT11-204ENST00000446681 ZNF608Q9ULD9 1512 aaPredicted RBP23.35■■□□□ 1.33
TRMT11-204ENST00000446681 TRIM41Q8WV44 630 aa23.34■■□□□ 1.33
TRMT11-204ENST00000446681 AQRO60306 1485 aaKnown RBP eCLIP23.31■■□□□ 1.321e-6■□□□□ 8
TRMT11-204ENST00000446681 TARBP1Q13395 1621 aaKnown RBP23.3■■□□□ 1.32
TRMT11-204ENST00000446681 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
TRMT11-204ENST00000446681 ABCA10Q8WWZ4 1543 aa23.27■■□□□ 1.32
TRMT11-204ENST00000446681 GAPVD1Q14C86 1478 aa23.19■■□□□ 1.3
TRMT11-204ENST00000446681 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
TRMT11-204ENST00000446681 GRIN2BQ13224 1484 aa23.17■■□□□ 1.3
TRMT11-204ENST00000446681 WDR97A6NE52 1622 aa23.16■■□□□ 1.3
TRMT11-204ENST00000446681 FBLN2P98095 1184 aa23.15■■□□□ 1.3
TRMT11-204ENST00000446681 KIF27Q86VH2 1401 aa23.13■■□□□ 1.29
TRMT11-204ENST00000446681 CHMP7Q8WUX9 453 aaPredicted RBP23.1■■□□□ 1.29
TRMT11-204ENST00000446681 OSCARQ8IYS5 282 aa23.09■■□□□ 1.29
TRMT11-204ENST00000446681 SNAPC4Q5SXM2 1469 aa23.07■■□□□ 1.28
TRMT11-204ENST00000446681 MAGI1Q96QZ7 1491 aaPredicted RBP23.05■■□□□ 1.28
TRMT11-204ENST00000446681 ABCA5Q8WWZ7 1642 aa23.03■■□□□ 1.28
TRMT11-204ENST00000446681 DNAJC5Q9H3Z4 198 aa22.99■■□□□ 1.27
TRMT11-204ENST00000446681 IGF1RP08069 1367 aa22.99■■□□□ 1.27
TRMT11-204ENST00000446681 ERICH3Q5RHP9 1530 aa22.98■■□□□ 1.27
TRMT11-204ENST00000446681 SYNJ2O15056 1496 aa22.97■■□□□ 1.27
TRMT11-204ENST00000446681 FHAD1B1AJZ9 1412 aa22.96■■□□□ 1.27
TRMT11-204ENST00000446681 CARMIL1Q5VZK9 1371 aa22.89■■□□□ 1.25
TRMT11-204ENST00000446681 PBRM1Q86U86 1689 aa22.88■■□□□ 1.25
TRMT11-204ENST00000446681 RUSC2Q8N2Y8 1516 aa22.87■■□□□ 1.25
TRMT11-204ENST00000446681 FAM9AQ8IZU1 332 aaPredicted RBP22.84■■□□□ 1.25
TRMT11-204ENST00000446681 CSRNP3Q8WYN3 585 aa22.84■■□□□ 1.25
TRMT11-204ENST00000446681 ADAMTS12P58397 1594 aa22.84■■□□□ 1.25
TRMT11-204ENST00000446681 POTEDQ86YR6 584 aa22.83■■□□□ 1.25
TRMT11-204ENST00000446681 GRIN2AQ12879 1464 aa22.83■■□□□ 1.25
TRMT11-204ENST00000446681 EEA1Q15075 1411 aa22.82■■□□□ 1.24
TRMT11-204ENST00000446681 CUL7Q14999 1698 aa22.74■■□□□ 1.23
TRMT11-204ENST00000446681 CHD1O14646 1710 aa22.74■■□□□ 1.23
TRMT11-204ENST00000446681 RAPGEF2Q9Y4G8 1499 aa22.73■■□□□ 1.23
TRMT11-204ENST00000446681 NUP160Q12769 1436 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms