RNA–Protein interactions for RNA: ENST00000525358.1

EDRF1-210, Transcript of erythroid differentiation regulatory factor 1, humanhuman

TSL 3

Gene EDRF1, Length 436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDRF1-210ENST00000525358 NISCHQ9Y2I1 1504 aa26.29■■□□□ 1.8
EDRF1-210ENST00000525358 AEBP2Q6ZN18 517 aaPredicted RBP26.28■■□□□ 1.8
EDRF1-210ENST00000525358 CHIC1Q5VXU3 224 aa25.6■■□□□ 1.69
EDRF1-210ENST00000525358 CCDC180Q9P1Z9 1646 aa23.26■■□□□ 1.31
EDRF1-210ENST00000525358 ABCC9O60706 1549 aa22.72■■□□□ 1.23
EDRF1-210ENST00000525358 PHF23Q9BUL5 403 aaPredicted RBP22.46■■□□□ 1.19
EDRF1-210ENST00000525358 SENP3Q9H4L4 574 aaPredicted RBP22.41■■□□□ 1.18
EDRF1-210ENST00000525358 DCAF8L2P0C7V8 631 aa22.05■■□□□ 1.12
EDRF1-210ENST00000525358 NACADO15069 1562 aa21.91■■□□□ 1.1
EDRF1-210ENST00000525358 RB1CC1Q8TDY2 1594 aa21.9■■□□□ 1.1
EDRF1-210ENST00000525358 ZCCHC6Q5VYS8 1495 aaKnown RBP21.9■■□□□ 1.1
EDRF1-210ENST00000525358 MYO15BQ96JP2 1530 aa21.81■■□□□ 1.08
EDRF1-210ENST00000525358 DCAF1Q9Y4B6 1507 aa21.75■■□□□ 1.07
EDRF1-210ENST00000525358 PABPN1Q86U42 306 aaKnown RBP eCLIP21.31■■□□□ 1
EDRF1-210ENST00000525358 UNC13AQ9UPW8 1703 aa21.29■■□□□ 1
EDRF1-210ENST00000525358 SCRIBQ14160 1630 aa21.26■□□□□ 0.99
EDRF1-210ENST00000525358 BICRAQ9NZM4 1560 aa21.19■□□□□ 0.98
EDRF1-210ENST00000525358 SHROOM4Q9ULL8 1493 aa21.01■□□□□ 0.95
EDRF1-210ENST00000525358 DNAJC5BQ9UF47 199 aa20.78■□□□□ 0.92
EDRF1-210ENST00000525358 PLPPR3Q6T4P5 718 aa20.77■□□□□ 0.92
EDRF1-210ENST00000525358 FOXD1Q16676 465 aa20.76■□□□□ 0.91
EDRF1-210ENST00000525358 EIF4G1Q04637 1599 aaKnown RBP20.64■□□□□ 0.9
EDRF1-210ENST00000525358 CC2D2AQ9P2K1 1620 aa20.53■□□□□ 0.88
EDRF1-210ENST00000525358 CECR2Q9BXF3 1484 aa20.47■□□□□ 0.87
EDRF1-210ENST00000525358 BAZ1AQ9NRL2 1556 aaPredicted RBP20.38■□□□□ 0.85
EDRF1-210ENST00000525358 SMARCA4P51532 1647 aa20.34■□□□□ 0.85
EDRF1-210ENST00000525358 MROH2BQ7Z745 1585 aa20.25■□□□□ 0.83
EDRF1-210ENST00000525358 ATAD2BQ9ULI0 1458 aa20.24■□□□□ 0.83
EDRF1-210ENST00000525358 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
EDRF1-210ENST00000525358 SMARCA2P51531 1590 aa20.21■□□□□ 0.83
EDRF1-210ENST00000525358 PEG3Q9GZU2 1588 aa20.14■□□□□ 0.81
EDRF1-210ENST00000525358 HMGXB3Q12766 1538 aa20.09■□□□□ 0.81
EDRF1-210ENST00000525358 BAZ1BQ9UIG0 1483 aaKnown RBP20.09■□□□□ 0.81
EDRF1-210ENST00000525358 RSF1Q96T23 1441 aaPredicted RBP20.09■□□□□ 0.81
EDRF1-210ENST00000525358 WIZO95785 1651 aa20.02■□□□□ 0.8
EDRF1-210ENST00000525358 PPP6R1Q9UPN7 881 aa19.86■□□□□ 0.77
EDRF1-210ENST00000525358 ADRA2BP18089 450 aa19.83■□□□□ 0.77
EDRF1-210ENST00000525358 TOP2AP11388 1531 aaKnown RBP19.82■□□□□ 0.76
EDRF1-210ENST00000525358 SUPT5HO00267 1087 aaKnown RBP19.74■□□□□ 0.75
EDRF1-210ENST00000525358 CADPSQ9ULU8 1353 aa19.68■□□□□ 0.74
EDRF1-210ENST00000525358 NESP48681 1621 aa19.67■□□□□ 0.74
EDRF1-210ENST00000525358 LAMC3Q9Y6N6 1575 aa19.66■□□□□ 0.74
EDRF1-210ENST00000525358 CCDC88BA6NC98 1476 aa19.63■□□□□ 0.73
EDRF1-210ENST00000525358 ERCC6Q03468 1493 aa19.6■□□□□ 0.73
EDRF1-210ENST00000525358 PDS5BQ9NTI5 1447 aa19.58■□□□□ 0.72
EDRF1-210ENST00000525358 PIAS4Q8N2W9 510 aaPredicted RBP19.56■□□□□ 0.72
EDRF1-210ENST00000525358 CFTRP13569 1480 aa19.54■□□□□ 0.72
EDRF1-210ENST00000525358 FANCD2Q9BXW9 1451 aa19.41■□□□□ 0.7
EDRF1-210ENST00000525358 KIF21AQ7Z4S6 1674 aa19.39■□□□□ 0.69
EDRF1-210ENST00000525358 CEP164Q9UPV0 1460 aa19.37■□□□□ 0.69
EDRF1-210ENST00000525358 CUX2O14529 1486 aa19.33■□□□□ 0.68
EDRF1-210ENST00000525358 MRC2Q9UBG0 1479 aa19.32■□□□□ 0.68
EDRF1-210ENST00000525358 THOC2Q8NI27 1593 aaKnown RBP19.3■□□□□ 0.68
EDRF1-210ENST00000525358 PRDM2Q13029 1718 aa19.29■□□□□ 0.68
EDRF1-210ENST00000525358 MSH5O43196 834 aa19.26■□□□□ 0.67
EDRF1-210ENST00000525358 WDR62O43379 1518 aa19.22■□□□□ 0.67
EDRF1-210ENST00000525358 URB2Q14146 1524 aaKnown RBP19.18■□□□□ 0.66
EDRF1-210ENST00000525358 ABCC8Q09428 1581 aa19.16■□□□□ 0.66
EDRF1-210ENST00000525358 TOPBP1Q92547 1522 aa19.1■□□□□ 0.65
EDRF1-210ENST00000525358 DNMBPQ6XZF7 1577 aa19.07■□□□□ 0.64
EDRF1-210ENST00000525358 CUX1P39880 1505 aa18.98■□□□□ 0.63
EDRF1-210ENST00000525358 IFT140Q96RY7 1462 aa18.97■□□□□ 0.63
EDRF1-210ENST00000525358 WRNQ14191 1432 aaPredicted RBP eCLIP18.95■□□□□ 0.62
EDRF1-210ENST00000525358 POLA1P09884 1462 aaPredicted RBP18.94■□□□□ 0.62
EDRF1-210ENST00000525358 SOGA1O94964 1423 aa18.93■□□□□ 0.62
EDRF1-210ENST00000525358 FGD5Q6ZNL6 1462 aa18.92■□□□□ 0.62
EDRF1-210ENST00000525358 RAD54L2Q9Y4B4 1467 aa18.88■□□□□ 0.61
EDRF1-210ENST00000525358 TARBP1Q13395 1621 aaKnown RBP18.85■□□□□ 0.61
EDRF1-210ENST00000525358 TOP2BQ02880 1626 aa18.85■□□□□ 0.61
EDRF1-210ENST00000525358 ZNF608Q9ULD9 1512 aaPredicted RBP18.84■□□□□ 0.61
EDRF1-210ENST00000525358 SYNJ1O43426 1573 aa18.84■□□□□ 0.61
EDRF1-210ENST00000525358 BIVM-ERCC5R4GMW8 1640 aa18.82■□□□□ 0.6
EDRF1-210ENST00000525358 AQRO60306 1485 aaKnown RBP eCLIP18.8■□□□□ 0.6
EDRF1-210ENST00000525358 TDRD9Q8NDG6 1382 aaKnown RBP18.8■□□□□ 0.6
EDRF1-210ENST00000525358 ABCA10Q8WWZ4 1543 aa18.74■□□□□ 0.59
EDRF1-210ENST00000525358 EIF4G3O43432 1585 aaKnown RBP18.74■□□□□ 0.59
EDRF1-210ENST00000525358 WDR97A6NE52 1622 aa18.73■□□□□ 0.59
EDRF1-210ENST00000525358 GAPVD1Q14C86 1478 aa18.68■□□□□ 0.58
EDRF1-210ENST00000525358 DNAJC5Q9H3Z4 198 aa18.67■□□□□ 0.58
EDRF1-210ENST00000525358 GRIN2BQ13224 1484 aa18.66■□□□□ 0.58
EDRF1-210ENST00000525358 TRIM41Q8WV44 630 aa18.66■□□□□ 0.58
EDRF1-210ENST00000525358 OSCARQ8IYS5 282 aa18.64■□□□□ 0.57
EDRF1-210ENST00000525358 ABCA5Q8WWZ7 1642 aa18.61■□□□□ 0.57
EDRF1-210ENST00000525358 FBLN2P98095 1184 aa18.61■□□□□ 0.57
EDRF1-210ENST00000525358 SNAPC4Q5SXM2 1469 aa18.59■□□□□ 0.57
EDRF1-210ENST00000525358 MAGI1Q96QZ7 1491 aaPredicted RBP18.58■□□□□ 0.57
EDRF1-210ENST00000525358 CHMP7Q8WUX9 453 aaPredicted RBP18.58■□□□□ 0.56
EDRF1-210ENST00000525358 KIF27Q86VH2 1401 aa18.57■□□□□ 0.56
EDRF1-210ENST00000525358 PBRM1Q86U86 1689 aa18.54■□□□□ 0.56
EDRF1-210ENST00000525358 ERICH3Q5RHP9 1530 aa18.52■□□□□ 0.56
EDRF1-210ENST00000525358 SYNJ2O15056 1496 aa18.52■□□□□ 0.55
EDRF1-210ENST00000525358 IGF1RP08069 1367 aa18.48■□□□□ 0.55
EDRF1-210ENST00000525358 FHAD1B1AJZ9 1412 aa18.48■□□□□ 0.55
EDRF1-210ENST00000525358 CHD1O14646 1710 aa18.46■□□□□ 0.55
EDRF1-210ENST00000525358 ADAMTS12P58397 1594 aa18.42■□□□□ 0.54
EDRF1-210ENST00000525358 GRIN2AQ12879 1464 aa18.4■□□□□ 0.54
EDRF1-210ENST00000525358 RUSC2Q8N2Y8 1516 aa18.39■□□□□ 0.54
EDRF1-210ENST00000525358 CARMIL1Q5VZK9 1371 aa18.38■□□□□ 0.53
EDRF1-210ENST00000525358 CUL7Q14999 1698 aa18.35■□□□□ 0.53
EDRF1-210ENST00000525358 NUP160Q12769 1436 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms