Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 OR10C1-204ENST00000622521 1039 ntBASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV12-3A0A0B4J271 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 KRT16P6-202ENST00000425692 1426 ntBASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 PTBP1P-201ENST00000554374 1601 ntBASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 AC005181.1-201ENST00000604782 1256 ntBASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 AL031963.3-201ENST00000606441 850 ntBASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 AL589743.5-201ENST00000616611 1050 ntBASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-3A0A0B4J271 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 KRT8P20-201ENST00000423953 1409 ntBASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 AC010980.2-201ENST00000587099 1412 ntBASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 AC004911.1-201ENST00000416316 871 ntBASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
TRAV12-3A0A0B4J271 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms