Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.97■□□□□ 0.152e-9■□□□□ 8.1
PRPF8Q6P2Q9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.032e-9■□□□□ 8.1
PRPF8Q6P2Q9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.022e-9■□□□□ 8.1
PRPF8Q6P2Q9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.022e-9■□□□□ 8.1
PRPF8Q6P2Q9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.032e-9■□□□□ 8.1
PRPF8Q6P2Q9 SPACA6-211ENST00000576494 495 ntTSL 310.97□□□□□ -0.652e-9■□□□□ 8.1
PRPF8Q6P2Q9 TGFBI-212ENST00000514242 574 ntTSL 210.07□□□□□ -0.82e-9■□□□□ 8.1
PRPF8Q6P2Q9 RALGAPA1-213ENST00000556192 480 ntTSL 520.67■□□□□ 0.91e-23■□□□□ 8.1
PRPF8Q6P2Q9 POLR2H-209ENST00000460083 439 ntTSL 313.78□□□□□ -0.24e-20■□□□□ 8.1
PRPF8Q6P2Q9 TF-205ENST00000462495 582 ntTSL 26.82□□□□□ -1.321e-323■□□□□ 8.1
PRPF8Q6P2Q9 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.037e-12■□□□□ 8.1
PRPF8Q6P2Q9 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.667e-12■□□□□ 8.1
PRPF8Q6P2Q9 RNF217-209ENST00000519971 274 ntTSL 39.91□□□□□ -0.827e-12■□□□□ 8.1
PRPF8Q6P2Q9 RNF217-207ENST00000519565 10660 ntTSL 53.6□□□□□ -1.837e-12■□□□□ 8.1
PRPF8Q6P2Q9 SND1-209ENST00000470723 568 ntTSL 410.53□□□□□ -0.723e-7■□□□□ 8.1
PRPF8Q6P2Q9 KDSR-210ENST00000590056 462 ntTSL 321.95■■□□□ 1.15e-7■□□□□ 8.1
PRPF8Q6P2Q9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.985e-7■□□□□ 8.1
PRPF8Q6P2Q9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.57■□□□□ 0.725e-7■□□□□ 8.1
PRPF8Q6P2Q9 ZNF264-203ENST00000594126 359 ntTSL 317.95■□□□□ 0.465e-7■□□□□ 8.1
PRPF8Q6P2Q9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.69■□□□□ 0.425e-7■□□□□ 8.1
PRPF8Q6P2Q9 KDSR-208ENST00000589530 588 ntTSL 217.2■□□□□ 0.345e-7■□□□□ 8.1
PRPF8Q6P2Q9 MFSD12-203ENST00000398558 1014 ntTSL 216.55■□□□□ 0.245e-7■□□□□ 8.1
PRPF8Q6P2Q9 MED22-206ENST00000482295 491 ntTSL 314.77□□□□□ -0.045e-7■□□□□ 8.1
PRPF8Q6P2Q9 PLOD1-204ENST00000449038 762 ntTSL 514.24□□□□□ -0.135e-7■□□□□ 8.1
PRPF8Q6P2Q9 MED22-204ENST00000457204 561 ntTSL 414.05□□□□□ -0.165e-7■□□□□ 8.1
PRPF8Q6P2Q9 KDSR-206ENST00000587292 569 ntTSL 514.01□□□□□ -0.175e-7■□□□□ 8.1
PRPF8Q6P2Q9 USB1-210ENST00000565151 886 ntTSL 212.75□□□□□ -0.375e-7■□□□□ 8.1
PRPF8Q6P2Q9 ESRP2-206ENST00000563159 716 ntTSL 412.32□□□□□ -0.445e-7■□□□□ 8.1
PRPF8Q6P2Q9 KDM4B-212ENST00000624683 5076 nt11.67□□□□□ -0.545e-7■□□□□ 8.1
PRPF8Q6P2Q9 STARD10-202ENST00000400925 541 ntTSL 211.27□□□□□ -0.65e-7■□□□□ 8.1
PRPF8Q6P2Q9 KDSR-203ENST00000585456 476 ntTSL 310.86□□□□□ -0.675e-7■□□□□ 8.1
PRPF8Q6P2Q9 ADK-204ENST00000478611 443 ntTSL 310.81□□□□□ -0.685e-7■□□□□ 8.1
PRPF8Q6P2Q9 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.75e-7■□□□□ 8.1
PRPF8Q6P2Q9 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.785e-7■□□□□ 8.1
PRPF8Q6P2Q9 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.85e-7■□□□□ 8.1
PRPF8Q6P2Q9 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.85e-7■□□□□ 8.1
PRPF8Q6P2Q9 H2AFY-214ENST00000508962 293 ntTSL 39.99□□□□□ -0.815e-7■□□□□ 8.1
PRPF8Q6P2Q9 TCEAL9-201ENST00000372656 992 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.835e-7■□□□□ 8.1
PRPF8Q6P2Q9 KDM5C-211ENST00000477109 297 ntTSL 39.72□□□□□ -0.855e-7■□□□□ 8.1
PRPF8Q6P2Q9 MCM7-208ENST00000467516 776 ntTSL 29.47□□□□□ -0.895e-7■□□□□ 8.1
PRPF8Q6P2Q9 VPS4B-207ENST00000591519 551 ntTSL 2 BASIC9□□□□□ -0.975e-7■□□□□ 8.1
PRPF8Q6P2Q9 HSPA12A-203ENST00000480802 624 ntTSL 38.68□□□□□ -1.025e-7■□□□□ 8.1
PRPF8Q6P2Q9 AP1G2-214ENST00000554892 658 ntTSL 28.62□□□□□ -1.035e-13■□□□□ 8.1
PRPF8Q6P2Q9 USB1-212ENST00000566082 3888 ntTSL 28.52□□□□□ -1.055e-7■□□□□ 8.1
PRPF8Q6P2Q9 AP1G2-232ENST00000557391 459 ntTSL 27.23□□□□□ -1.255e-13■□□□□ 8.1
PRPF8Q6P2Q9 SND1-205ENST00000467238 716 ntTSL 36.41□□□□□ -1.385e-7■□□□□ 8.1
PRPF8Q6P2Q9 ASPH-227ENST00000523897 871 ntTSL 36.35□□□□□ -1.395e-7■□□□□ 8.1
PRPF8Q6P2Q9 ASPH-215ENST00000519264 337 ntTSL 53.78□□□□□ -1.85e-7■□□□□ 8.1
PRPF8Q6P2Q9 ASPH-213ENST00000518441 781 ntTSL 2-0.33□□□□□ -2.465e-7■□□□□ 8.1
PRPF8Q6P2Q9 ASPH-218ENST00000521499 484 ntTSL 3-0.42□□□□□ -2.485e-7■□□□□ 8.1
PRPF8Q6P2Q9 AGXT-202ENST00000470255 2638 ntTSL 212.89□□□□□ -0.352e-9■□□□□ 8.1
PRPF8Q6P2Q9 TBX1-205ENST00000484336 529 ntTSL 323.23■■□□□ 1.314e-9■□□□□ 8.1
PRPF8Q6P2Q9 CA8-202ENST00000524872 1825 ntTSL 1 (best)14.87□□□□□ -0.034e-9■□□□□ 8.1
PRPF8Q6P2Q9 CA8-201ENST00000317995 3812 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.194e-9■□□□□ 8.1
PRPF8Q6P2Q9 CA8-203ENST00000528666 510 ntTSL 37.21□□□□□ -1.264e-9■□□□□ 8.1
PRPF8Q6P2Q9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.113e-8■□□□□ 8.1
PRPF8Q6P2Q9 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.343e-8■□□□□ 8.1
PRPF8Q6P2Q9 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.523e-8■□□□□ 8.1
PRPF8Q6P2Q9 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.673e-8■□□□□ 8.1
PRPF8Q6P2Q9 AC074032.1-201ENST00000548468 698 ntTSL 3 BASIC9.79□□□□□ -0.843e-8■□□□□ 8.1
PRPF8Q6P2Q9 AC074032.1-202ENST00000552815 467 ntTSL 3 BASIC8.23□□□□□ -1.093e-8■□□□□ 8.1
PRPF8Q6P2Q9 SCAP-209ENST00000465628 589 ntTSL 213.29□□□□□ -0.282e-6■□□□□ 8.1
PRPF8Q6P2Q9 SH2B1-208ENST00000563591 588 ntTSL 218.98■□□□□ 0.631e-31■□□□□ 8.1
PRPF8Q6P2Q9 SH2B1-211ENST00000566209 533 ntTSL 410.85□□□□□ -0.671e-31■□□□□ 8.1
PRPF8Q6P2Q9 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.35□□□□□ -0.431e-10■□□□□ 8.1
PRPF8Q6P2Q9 HERC2P2-203ENST00000615156 704 ntTSL 36.12□□□□□ -1.431e-10■□□□□ 8.1
PRPF8Q6P2Q9 SPATA20-211ENST00000505456 878 ntTSL 513.62□□□□□ -0.231e-10■□□□□ 8.1
PRPF8Q6P2Q9 SPATA20-203ENST00000502911 879 ntTSL 513.53□□□□□ -0.241e-10■□□□□ 8.1
PRPF8Q6P2Q9 SPATA20-222ENST00000512416 845 ntTSL 311.4□□□□□ -0.591e-10■□□□□ 8.1
PRPF8Q6P2Q9 HM13-218ENST00000487281 757 ntTSL 312.89□□□□□ -0.352e-23■□□□□ 8.1
PRPF8Q6P2Q9 HM13-221ENST00000493364 372 ntTSL 28.92□□□□□ -0.982e-23■□□□□ 8.1
PRPF8Q6P2Q9 CNP-207ENST00000587679 581 ntTSL 419.86■□□□□ 0.774e-14■□□□□ 8
PRPF8Q6P2Q9 CNP-211ENST00000592446 587 ntTSL 419.86■□□□□ 0.774e-14■□□□□ 8
PRPF8Q6P2Q9 CNP-209ENST00000591945 576 ntTSL 319.63■□□□□ 0.734e-14■□□□□ 8
PRPF8Q6P2Q9 CNP-203ENST00000441615 622 ntTSL 314.69□□□□□ -0.064e-14■□□□□ 8
PRPF8Q6P2Q9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.98■□□□□ 0.952e-6■□□□□ 8
PRPF8Q6P2Q9 FCGRT-205ENST00000593431 582 ntTSL 316.42■□□□□ 0.222e-6■□□□□ 8
PRPF8Q6P2Q9 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.11■□□□□ 0.012e-6■□□□□ 8
PRPF8Q6P2Q9 FCGRT-203ENST00000452439 1351 ntTSL 215.09■□□□□ 0.012e-6■□□□□ 8
PRPF8Q6P2Q9 FCGRT-208ENST00000595881 2681 ntTSL 214.03□□□□□ -0.162e-6■□□□□ 8
PRPF8Q6P2Q9 FCGRT-212ENST00000598319 1888 ntTSL 513.43□□□□□ -0.262e-6■□□□□ 8
PRPF8Q6P2Q9 FCGRT-211ENST00000598076 676 ntTSL 311.39□□□□□ -0.592e-6■□□□□ 8
PRPF8Q6P2Q9 PHLDB3-205ENST00000596902 808 ntTSL 1 (best)19.7■□□□□ 0.744e-6■□□□□ 8
PRPF8Q6P2Q9 YWHAH-204ENST00000443669 822 ntTSL 319.52■□□□□ 0.724e-6■□□□□ 8
PRPF8Q6P2Q9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.664e-6■□□□□ 8
PRPF8Q6P2Q9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.84■□□□□ 0.614e-6■□□□□ 8
PRPF8Q6P2Q9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.73■□□□□ 0.434e-6■□□□□ 8
PRPF8Q6P2Q9 SCYL1-213ENST00000532290 856 nt17.71■□□□□ 0.434e-6■□□□□ 8
PRPF8Q6P2Q9 CAPN1-203ENST00000525013 643 ntTSL 215.99■□□□□ 0.154e-6■□□□□ 8
PRPF8Q6P2Q9 SCYL1-215ENST00000534462 579 ntTSL 315.68■□□□□ 0.14e-6■□□□□ 8
PRPF8Q6P2Q9 YWHAH-205ENST00000471374 1735 ntTSL 215.5■□□□□ 0.074e-6■□□□□ 8
PRPF8Q6P2Q9 PACS2-208ENST00000548796 1621 ntTSL 515.49■□□□□ 0.074e-6■□□□□ 8
PRPF8Q6P2Q9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 04e-6■□□□□ 8
PRPF8Q6P2Q9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.014e-6■□□□□ 8
PRPF8Q6P2Q9 FCGRT-215ENST00000598936 870 ntTSL 314.91□□□□□ -0.024e-6■□□□□ 8
PRPF8Q6P2Q9 LMNA-211ENST00000470199 551 ntTSL 414.84□□□□□ -0.034e-6■□□□□ 8
PRPF8Q6P2Q9 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.044e-6■□□□□ 8
PRPF8Q6P2Q9 CERS4-211ENST00000560412 568 ntTSL 414.61□□□□□ -0.074e-6■□□□□ 8
PRPF8Q6P2Q9 TEX264-213ENST00000489026 800 ntTSL 214.19□□□□□ -0.144e-6■□□□□ 8
PRPF8Q6P2Q9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.154e-6■□□□□ 8
Retrieved 100 of 73,762 protein–RNA pairs in 3330.5 ms