Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 CACNA1D-228ENST00000638120 1830 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 RC3H2-202ENST00000357244 3991 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 POM121B-201ENST00000380760 2487 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 MMP2-202ENST00000437642 2469 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 GRM8-203ENST00000358373 3850 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AC037441.1-202ENST00000511897 3879 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 FAR1-201ENST00000354817 5264 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 BOLL-202ENST00000321801 3135 ntAPPRIS P4 TSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 MTIF2-204ENST00000403721 2386 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 KLK10-203ENST00000391805 3006 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 ZNF180-211ENST00000592529 3048 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 CTCFL-201ENST00000243914 3567 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 EFCAB6-201ENST00000262726 4869 ntAPPRIS P4 TSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 RHBDF2-201ENST00000313080 3582 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 LINC02239-201ENST00000504339 2290 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 NUDT13-207ENST00000544879 2258 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 LINC01254-201ENST00000566225 2908 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AL139005.1-201ENST00000623899 1635 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 BTN2A1-207ENST00000541522 2845 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 RAPGEF6-215ENST00000627212 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 PIGB-201ENST00000164305 2172 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 SMARCA2-263ENST00000637806 7061 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 PNPLA4-201ENST00000381042 3372 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AC012368.1-206ENST00000451350 1504 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 ITGAX-204ENST00000562918 1521 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 TAF9B-201ENST00000341864 2713 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 USP10-219ENST00000570191 2717 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AC107892.1-201ENST00000577382 2727 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 GABRB3-201ENST00000299267 4494 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 EDNRB-202ENST00000377211 4471 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 ALDH1A2-202ENST00000347587 3297 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 RAPGEF3-201ENST00000389212 3294 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 MPP4-208ENST00000447335 2050 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 ZNF623-202ENST00000501748 6759 ntAPPRIS P3 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 MED22-208ENST00000610672 4367 ntAPPRIS P4 TSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 RBM12B-208ENST00000627241 2646 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 PRAMENP-203ENST00000548391 1445 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 NEK1-206ENST00000510533 5377 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 ASNS-202ENST00000394308 1994 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 ZNF621-203ENST00000403205 1979 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 BTBD10-201ENST00000278174 2504 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 SSU72-202ENST00000359060 4176 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 SETMAR-201ENST00000358065 2443 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 YEATS2-AS1-201ENST00000425008 2442 ntTSL 4 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 PHACTR4-202ENST00000373839 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 IGBP1-201ENST00000342206 1862 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 CACNB4-202ENST00000360283 1885 ntTSL 5 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 SCN5A-210ENST00000455624 7170 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 SYT2-201ENST00000367267 7614 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 LPP-AS2-201ENST00000605573 2852 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AL356488.3-201ENST00000608574 2888 ntBASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 COL4A6-208ENST00000538570 6528 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AL441943.2-201ENST00000421077 2321 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 GPR155-202ENST00000392551 4876 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRTAP4-4Q9BYR3 AC097382.2-201ENST00000500031 4300 ntTSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 DDX3X-203ENST00000457138 5346 ntTSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 PHC2-203ENST00000373422 2799 ntTSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 MPHOSPH8-201ENST00000361479 4235 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 BRINP1-201ENST00000265922 3202 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 IKBKE-203ENST00000581977 3221 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 ATIC-201ENST00000236959 2213 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 SUPT5H-203ENST00000402194 3698 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 AC097637.1-201ENST00000494383 3695 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 CARMN-205ENST00000518014 5131 ntTSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 OLFML2B-203ENST00000367940 2685 ntAPPRIS ALT1 TSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 CTNNA1-243ENST00000540387 2684 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 PPIP5K1-203ENST00000360135 5559 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 PPIP5K1-204ENST00000360301 5565 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 PPIP5K1-206ENST00000381885 5596 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 SYN3-202ENST00000358763 3126 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 PCYT1B-202ENST00000379144 1692 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 KCNB2-201ENST00000523207 3582 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 RNF43-207ENST00000583753 3560 ntTSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 ANKRD55-203ENST00000504958 2139 ntTSL 5 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 WDR37-201ENST00000263150 4462 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 MTMR4-201ENST00000323456 5839 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 SPRTN-202ENST00000295050 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRTAP4-4Q9BYR3 SELENOT-207ENST00000615547 3488 ntTSL 5 BASIC2.15□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms