RNA–Protein interactions for RNA: ENST00000504958.6

ANKRD55-203, Transcript of ankyrin repeat domain 55, humanhuman

TSL 5 BASIC

Gene ANKRD55, Length 2,139 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55-203ENST00000504958 NISCHQ9Y2I1 1504 aa19.65■□□□□ 0.74
ANKRD55-203ENST00000504958 CCDC180Q9P1Z9 1646 aa17■□□□□ 0.31
ANKRD55-203ENST00000504958 SHROOM4Q9ULL8 1493 aa16.59■□□□□ 0.25
ANKRD55-203ENST00000504958 ZCCHC6Q5VYS8 1495 aaKnown RBP16.49■□□□□ 0.23
ANKRD55-203ENST00000504958 DCAF8L2P0C7V8 631 aa16.46■□□□□ 0.23
ANKRD55-203ENST00000504958 SUPT5HO00267 1087 aaKnown RBP16.44■□□□□ 0.22
ANKRD55-203ENST00000504958 HRCP23327 699 aa16.29■□□□□ 0.2
ANKRD55-203ENST00000504958 ABCC9O60706 1549 aa16.22■□□□□ 0.19
ANKRD55-203ENST00000504958 MYO15BQ96JP2 1530 aa16.21■□□□□ 0.19
ANKRD55-203ENST00000504958 CHIC1Q5VXU3 224 aa16.21■□□□□ 0.19
ANKRD55-203ENST00000504958 DCAF1Q9Y4B6 1507 aa16.15■□□□□ 0.18
ANKRD55-203ENST00000504958 PCGF6Q9BYE7 350 aa16■□□□□ 0.15
ANKRD55-203ENST00000504958 NACADO15069 1562 aa15.86■□□□□ 0.13
ANKRD55-203ENST00000504958 PPARGC1BQ86YN6 1023 aaKnown RBP15.81■□□□□ 0.12
ANKRD55-203ENST00000504958 SCRIBQ14160 1630 aa15.8■□□□□ 0.12
ANKRD55-203ENST00000504958 RB1CC1Q8TDY2 1594 aa15.73■□□□□ 0.11
ANKRD55-203ENST00000504958 LOC105371045A0A1W2PR82 267 aa15.71■□□□□ 0.11
ANKRD55-203ENST00000504958 TRIM26Q12899 539 aaPredicted RBP15.68■□□□□ 0.1
ANKRD55-203ENST00000504958 ZEB1P37275 1124 aaPredicted RBP15.52■□□□□ 0.08
ANKRD55-203ENST00000504958 UNC13AQ9UPW8 1703 aa15.43■□□□□ 0.06
ANKRD55-203ENST00000504958 RSF1Q96T23 1441 aaPredicted RBP15.41■□□□□ 0.06
ANKRD55-203ENST00000504958 PABPN1Q86U42 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
ANKRD55-203ENST00000504958 PELP1Q8IZL8 1130 aaKnown RBP15.36■□□□□ 0.05
ANKRD55-203ENST00000504958 CECR2Q9BXF3 1484 aa15.35■□□□□ 0.05
ANKRD55-203ENST00000504958 TRIM41Q8WV44 630 aa15.34■□□□□ 0.05
ANKRD55-203ENST00000504958 BICRAQ9NZM4 1560 aa15.29■□□□□ 0.04
ANKRD55-203ENST00000504958 MROH2BQ7Z745 1585 aa15.23■□□□□ 0.03
ANKRD55-203ENST00000504958 SCAF1Q9H7N4 1312 aaKnown RBP15.18■□□□□ 0.02
ANKRD55-203ENST00000504958 FAM9AQ8IZU1 332 aaPredicted RBP15.16■□□□□ 0.02
ANKRD55-203ENST00000504958 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
ANKRD55-203ENST00000504958 WIZO95785 1651 aa15.12■□□□□ 0.01
ANKRD55-203ENST00000504958 SMARCA4P51532 1647 aa15.08■□□□□ 0.01
ANKRD55-203ENST00000504958 EHMT2Q96KQ7 1210 aa14.96□□□□□ -0.01
ANKRD55-203ENST00000504958 ACIN1Q9UKV3 1341 aaKnown RBP14.95□□□□□ -0.02
ANKRD55-203ENST00000504958 EIF4G1Q04637 1599 aaKnown RBP14.94□□□□□ -0.02
ANKRD55-203ENST00000504958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
ANKRD55-203ENST00000504958 CCER1Q8TC90 406 aaPredicted RBP14.92□□□□□ -0.02
ANKRD55-203ENST00000504958 TOP2AP11388 1531 aaKnown RBP14.89□□□□□ -0.03
ANKRD55-203ENST00000504958 WRNQ14191 1432 aaPredicted RBP eCLIP14.88□□□□□ -0.03
ANKRD55-203ENST00000504958 NEUROD1Q13562 356 aa14.87□□□□□ -0.03
ANKRD55-203ENST00000504958 ATAD2BQ9ULI0 1458 aa14.84□□□□□ -0.03
ANKRD55-203ENST00000504958 DIEXFQ68CQ4 756 aaKnown RBP14.84□□□□□ -0.03
ANKRD55-203ENST00000504958 PEG3Q9GZU2 1588 aa14.82□□□□□ -0.04
ANKRD55-203ENST00000504958 CENPBP07199 599 aaPredicted RBP14.81□□□□□ -0.04
ANKRD55-203ENST00000504958 CCDC88BA6NC98 1476 aa14.81□□□□□ -0.04
ANKRD55-203ENST00000504958 SMARCA2P51531 1590 aa14.79□□□□□ -0.04
ANKRD55-203ENST00000504958 BAZ1BQ9UIG0 1483 aaKnown RBP14.77□□□□□ -0.04
ANKRD55-203ENST00000504958 GTF3C3Q9Y5Q9 886 aa14.76□□□□□ -0.05
ANKRD55-203ENST00000504958 CEP162Q5TB80 1403 aa14.75□□□□□ -0.05
ANKRD55-203ENST00000504958 TNIKQ9UKE5 1360 aa14.73□□□□□ -0.05
ANKRD55-203ENST00000504958 ABCC8Q09428 1581 aa14.71□□□□□ -0.05
ANKRD55-203ENST00000504958 MYT1Q01538 1121 aa14.71□□□□□ -0.06
ANKRD55-203ENST00000504958 EEA1Q15075 1411 aa14.69□□□□□ -0.06
ANKRD55-203ENST00000504958 NCAPD3P42695 1498 aa14.68□□□□□ -0.06
ANKRD55-203ENST00000504958 ZNF316A6NFI3 1004 aaPredicted RBP14.66□□□□□ -0.06
ANKRD55-203ENST00000504958 SOGA1O94964 1423 aa14.65□□□□□ -0.07
ANKRD55-203ENST00000504958 CSRNP3Q8WYN3 585 aa14.62□□□□□ -0.07
ANKRD55-203ENST00000504958 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
ANKRD55-203ENST00000504958 CC2D2AQ9P2K1 1620 aa14.61□□□□□ -0.07
ANKRD55-203ENST00000504958 TTBK1Q5TCY1 1321 aaPredicted RBP14.57□□□□□ -0.08
ANKRD55-203ENST00000504958 GOLGA3Q08378 1498 aa14.57□□□□□ -0.08
ANKRD55-203ENST00000504958 RUSC2Q8N2Y8 1516 aa14.55□□□□□ -0.08
ANKRD55-203ENST00000504958 UBTFP17480 764 aaKnown RBP14.54□□□□□ -0.08
ANKRD55-203ENST00000504958 KIF21BO75037 1637 aa14.48□□□□□ -0.09
ANKRD55-203ENST00000504958 MIER1Q8N108 512 aa14.47□□□□□ -0.09
ANKRD55-203ENST00000504958 CEP164Q9UPV0 1460 aa14.46□□□□□ -0.09
ANKRD55-203ENST00000504958 YTHDC1Q96MU7 727 aaKnown RBP14.42□□□□□ -0.1
ANKRD55-203ENST00000504958 CLIP1P30622 1438 aa14.4□□□□□ -0.1
ANKRD55-203ENST00000504958 VPS8Q8N3P4 1428 aa14.4□□□□□ -0.1
ANKRD55-203ENST00000504958 HNRNPUL2Q1KMD3 747 aaKnown RBP14.39□□□□□ -0.11
ANKRD55-203ENST00000504958 DNAJC5BQ9UF47 199 aa14.39□□□□□ -0.11
ANKRD55-203ENST00000504958 CFTRP13569 1480 aa14.38□□□□□ -0.11
ANKRD55-203ENST00000504958 SYNJ1O43426 1573 aa14.37□□□□□ -0.11
ANKRD55-203ENST00000504958 CADPSQ9ULU8 1353 aa14.35□□□□□ -0.11
ANKRD55-203ENST00000504958 CLSPNQ9HAW4 1339 aa14.34□□□□□ -0.11
ANKRD55-203ENST00000504958 APLP2Q06481 763 aa14.31□□□□□ -0.12
ANKRD55-203ENST00000504958 RAPGEF2Q9Y4G8 1499 aa14.28□□□□□ -0.12
ANKRD55-203ENST00000504958 NESP48681 1621 aa14.26□□□□□ -0.13
ANKRD55-203ENST00000504958 DHX57Q6P158 1386 aaKnown RBP14.23□□□□□ -0.13
ANKRD55-203ENST00000504958 TOP2BQ02880 1626 aa14.23□□□□□ -0.13
ANKRD55-203ENST00000504958 CUX1P39880 1505 aa14.22□□□□□ -0.13
ANKRD55-203ENST00000504958 PRDM2Q13029 1718 aa14.22□□□□□ -0.13
ANKRD55-203ENST00000504958 FANCD2Q9BXW9 1451 aa14.2□□□□□ -0.14
ANKRD55-203ENST00000504958 ERICH3Q5RHP9 1530 aa14.19□□□□□ -0.14
ANKRD55-203ENST00000504958 BIVM-ERCC5R4GMW8 1640 aa14.19□□□□□ -0.14
ANKRD55-203ENST00000504958 SUPT16HQ9Y5B9 1047 aaKnown RBP14.16□□□□□ -0.14
ANKRD55-203ENST00000504958 CUX2O14529 1486 aa14.14□□□□□ -0.15
ANKRD55-203ENST00000504958 PRXQ9BXM0 1461 aa14.14□□□□□ -0.15
ANKRD55-203ENST00000504958 RRBP1Q9P2E9 1410 aaKnown RBP14.14□□□□□ -0.15
ANKRD55-203ENST00000504958 LAMC3Q9Y6N6 1575 aa14.14□□□□□ -0.15
ANKRD55-203ENST00000504958 ARAP1Q96P48 1450 aa14.14□□□□□ -0.15
ANKRD55-203ENST00000504958 KANK4Q5T7N3 995 aaPredicted RBP14.09□□□□□ -0.15
ANKRD55-203ENST00000504958 RANGAP1P46060 587 aaPredicted RBP14.08□□□□□ -0.16
ANKRD55-203ENST00000504958 PDS5BQ9NTI5 1447 aa14.08□□□□□ -0.16
ANKRD55-203ENST00000504958 FGD5Q6ZNL6 1462 aa14.07□□□□□ -0.16
ANKRD55-203ENST00000504958 TOPBP1Q92547 1522 aa14.04□□□□□ -0.16
ANKRD55-203ENST00000504958 KIF27Q86VH2 1401 aa14.03□□□□□ -0.16
ANKRD55-203ENST00000504958 DNMBPQ6XZF7 1577 aa14.03□□□□□ -0.16
ANKRD55-203ENST00000504958 CCNB3Q8WWL7 1395 aa14.03□□□□□ -0.16
ANKRD55-203ENST00000504958 KIF21AQ7Z4S6 1674 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms