RNA–Protein interactions for RNA: ENST00000421077.1

AL441943.2-201, humanhuman

TSL 1 (best) BASIC

Gene AL441943.2, Length 2,321 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL441943.2-201ENST00000421077 NISCHQ9Y2I1 1504 aa21.95■■□□□ 1.1
AL441943.2-201ENST00000421077 CCDC180Q9P1Z9 1646 aa18.76■□□□□ 0.59
AL441943.2-201ENST00000421077 SHROOM4Q9ULL8 1493 aa18.62■□□□□ 0.57
AL441943.2-201ENST00000421077 PELP1Q8IZL8 1130 aaKnown RBP18.51■□□□□ 0.55
AL441943.2-201ENST00000421077 ZCCHC6Q5VYS8 1495 aaKnown RBP18.5■□□□□ 0.55
AL441943.2-201ENST00000421077 DCAF8L2P0C7V8 631 aa18.37■□□□□ 0.53
AL441943.2-201ENST00000421077 HRCP23327 699 aa18.14■□□□□ 0.49
AL441943.2-201ENST00000421077 MYT1Q01538 1121 aa18.09■□□□□ 0.49
AL441943.2-201ENST00000421077 SUPT5HO00267 1087 aaKnown RBP18.07■□□□□ 0.48
AL441943.2-201ENST00000421077 DCAF1Q9Y4B6 1507 aa17.93■□□□□ 0.46
AL441943.2-201ENST00000421077 ABCC9O60706 1549 aa17.75■□□□□ 0.43
AL441943.2-201ENST00000421077 SCRIBQ14160 1630 aa17.65■□□□□ 0.42
AL441943.2-201ENST00000421077 MYO15BQ96JP2 1530 aa17.5■□□□□ 0.39
AL441943.2-201ENST00000421077 NACADO15069 1562 aa17.4■□□□□ 0.38
AL441943.2-201ENST00000421077 CHIC1Q5VXU3 224 aa17.38■□□□□ 0.37
AL441943.2-201ENST00000421077 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
AL441943.2-201ENST00000421077 PPARGC1BQ86YN6 1023 aaKnown RBP17.37■□□□□ 0.37
AL441943.2-201ENST00000421077 RSF1Q96T23 1441 aaPredicted RBP17.27■□□□□ 0.36
AL441943.2-201ENST00000421077 SCAF1Q9H7N4 1312 aaKnown RBP17.22■□□□□ 0.35
AL441943.2-201ENST00000421077 CECR2Q9BXF3 1484 aa17.22■□□□□ 0.35
AL441943.2-201ENST00000421077 RB1CC1Q8TDY2 1594 aa17.2■□□□□ 0.34
AL441943.2-201ENST00000421077 ZEB1P37275 1124 aaPredicted RBP17.2■□□□□ 0.34
AL441943.2-201ENST00000421077 TTBK1Q5TCY1 1321 aaPredicted RBP17.14■□□□□ 0.34
AL441943.2-201ENST00000421077 MROH2BQ7Z745 1585 aa17.1■□□□□ 0.33
AL441943.2-201ENST00000421077 UNC13AQ9UPW8 1703 aa17.08■□□□□ 0.32
AL441943.2-201ENST00000421077 WIZO95785 1651 aa17.02■□□□□ 0.31
AL441943.2-201ENST00000421077 TRIM26Q12899 539 aaPredicted RBP16.97■□□□□ 0.31
AL441943.2-201ENST00000421077 PABPN1Q86U42 306 aaKnown RBP eCLIP16.94■□□□□ 0.3
AL441943.2-201ENST00000421077 LOC105371045A0A1W2PR82 267 aa16.93■□□□□ 0.3
AL441943.2-201ENST00000421077 ACIN1Q9UKV3 1341 aaKnown RBP16.85■□□□□ 0.29
AL441943.2-201ENST00000421077 BAZ1AQ9NRL2 1556 aaPredicted RBP16.85■□□□□ 0.29
AL441943.2-201ENST00000421077 BICRAQ9NZM4 1560 aa16.83■□□□□ 0.29
AL441943.2-201ENST00000421077 SMARCA4P51532 1647 aa16.8■□□□□ 0.28
AL441943.2-201ENST00000421077 TRIM41Q8WV44 630 aa16.78■□□□□ 0.28
AL441943.2-201ENST00000421077 CENPBP07199 599 aaPredicted RBP16.76■□□□□ 0.27
AL441943.2-201ENST00000421077 FAM9AQ8IZU1 332 aaPredicted RBP16.74■□□□□ 0.27
AL441943.2-201ENST00000421077 EHMT2Q96KQ7 1210 aa16.68■□□□□ 0.26
AL441943.2-201ENST00000421077 TOP2AP11388 1531 aaKnown RBP16.66■□□□□ 0.26
AL441943.2-201ENST00000421077 CCDC88BA6NC98 1476 aa16.62■□□□□ 0.25
AL441943.2-201ENST00000421077 GTF3C3Q9Y5Q9 886 aa16.62■□□□□ 0.25
AL441943.2-201ENST00000421077 EIF4G1Q04637 1599 aaKnown RBP16.62■□□□□ 0.25
AL441943.2-201ENST00000421077 NEUROD1Q13562 356 aa16.61■□□□□ 0.25
AL441943.2-201ENST00000421077 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
AL441943.2-201ENST00000421077 ABCC8Q09428 1581 aa16.55■□□□□ 0.24
AL441943.2-201ENST00000421077 PEG3Q9GZU2 1588 aa16.44■□□□□ 0.22
AL441943.2-201ENST00000421077 ATAD2BQ9ULI0 1458 aa16.43■□□□□ 0.22
AL441943.2-201ENST00000421077 BAZ1BQ9UIG0 1483 aaKnown RBP16.36■□□□□ 0.21
AL441943.2-201ENST00000421077 DIEXFQ68CQ4 756 aaKnown RBP16.32■□□□□ 0.2
AL441943.2-201ENST00000421077 BCL11AQ9H165 835 aa16.31■□□□□ 0.2
AL441943.2-201ENST00000421077 SOGA1O94964 1423 aa16.3■□□□□ 0.2
AL441943.2-201ENST00000421077 RUSC2Q8N2Y8 1516 aa16.28■□□□□ 0.2
AL441943.2-201ENST00000421077 WRNQ14191 1432 aaPredicted RBP eCLIP16.21■□□□□ 0.19
AL441943.2-201ENST00000421077 SYNJ1O43426 1573 aa16.21■□□□□ 0.19
AL441943.2-201ENST00000421077 CLSPNQ9HAW4 1339 aa16.21■□□□□ 0.18
AL441943.2-201ENST00000421077 ANP32EQ9BTT0 268 aa16.17■□□□□ 0.18
AL441943.2-201ENST00000421077 NCAPD3P42695 1498 aa16.12■□□□□ 0.17
AL441943.2-201ENST00000421077 SLC24A1O60721 1099 aa16.11■□□□□ 0.17
AL441943.2-201ENST00000421077 CSRNP3Q8WYN3 585 aa16.11■□□□□ 0.17
AL441943.2-201ENST00000421077 CCER1Q8TC90 406 aaPredicted RBP16.09■□□□□ 0.17
AL441943.2-201ENST00000421077 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
AL441943.2-201ENST00000421077 UBTFP17480 764 aaKnown RBP16.04■□□□□ 0.16
AL441943.2-201ENST00000421077 ERICH6Q7L0X2 663 aa16.04■□□□□ 0.16
AL441943.2-201ENST00000421077 CEP162Q5TB80 1403 aa16.03■□□□□ 0.16
AL441943.2-201ENST00000421077 EEA1Q15075 1411 aa16■□□□□ 0.15
AL441943.2-201ENST00000421077 TNIKQ9UKE5 1360 aa15.98■□□□□ 0.15
AL441943.2-201ENST00000421077 TOP2BQ02880 1626 aa15.98■□□□□ 0.15
AL441943.2-201ENST00000421077 ZNF316A6NFI3 1004 aaPredicted RBP15.96■□□□□ 0.15
AL441943.2-201ENST00000421077 CC2D2AQ9P2K1 1620 aa15.96■□□□□ 0.15
AL441943.2-201ENST00000421077 GOLGA3Q08378 1498 aa15.95■□□□□ 0.14
AL441943.2-201ENST00000421077 CUX1P39880 1505 aa15.93■□□□□ 0.14
AL441943.2-201ENST00000421077 CFTRP13569 1480 aa15.93■□□□□ 0.14
AL441943.2-201ENST00000421077 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.93■□□□□ 0.14
AL441943.2-201ENST00000421077 BIVM-ERCC5R4GMW8 1640 aa15.92■□□□□ 0.14
AL441943.2-201ENST00000421077 PRKCSHP14314 528 aaPredicted RBP15.92■□□□□ 0.14
AL441943.2-201ENST00000421077 RANGAP1P46060 587 aaPredicted RBP15.92■□□□□ 0.14
AL441943.2-201ENST00000421077 RAPGEF2Q9Y4G8 1499 aa15.9■□□□□ 0.14
AL441943.2-201ENST00000421077 YTHDC1Q96MU7 727 aaKnown RBP15.88■□□□□ 0.13
AL441943.2-201ENST00000421077 CEP164Q9UPV0 1460 aa15.88■□□□□ 0.13
AL441943.2-201ENST00000421077 KIF21BO75037 1637 aa15.88■□□□□ 0.13
AL441943.2-201ENST00000421077 CADPSQ9ULU8 1353 aa15.81■□□□□ 0.12
AL441943.2-201ENST00000421077 PRDM2Q13029 1718 aa15.8■□□□□ 0.12
AL441943.2-201ENST00000421077 TSHZ2Q9NRE2 1034 aa15.79■□□□□ 0.12
AL441943.2-201ENST00000421077 DNAJC5BQ9UF47 199 aa15.79■□□□□ 0.12
AL441943.2-201ENST00000421077 CLIP1P30622 1438 aa15.78■□□□□ 0.12
AL441943.2-201ENST00000421077 SUPT16HQ9Y5B9 1047 aaKnown RBP15.78■□□□□ 0.12
AL441943.2-201ENST00000421077 NESP48681 1621 aa15.76■□□□□ 0.11
AL441943.2-201ENST00000421077 PRXQ9BXM0 1461 aa15.73■□□□□ 0.11
AL441943.2-201ENST00000421077 MIER1Q8N108 512 aa15.73■□□□□ 0.11
AL441943.2-201ENST00000421077 KIF27Q86VH2 1401 aa15.71■□□□□ 0.1
AL441943.2-201ENST00000421077 FGD5Q6ZNL6 1462 aa15.68■□□□□ 0.1
AL441943.2-201ENST00000421077 FANCD2Q9BXW9 1451 aa15.68■□□□□ 0.1
AL441943.2-201ENST00000421077 CUX2O14529 1486 aa15.68■□□□□ 0.1
AL441943.2-201ENST00000421077 VPS8Q8N3P4 1428 aa15.66■□□□□ 0.1
AL441943.2-201ENST00000421077 MYT1LQ9UL68 1186 aa15.66■□□□□ 0.1
AL441943.2-201ENST00000421077 ERICH3Q5RHP9 1530 aa15.65■□□□□ 0.1
AL441943.2-201ENST00000421077 APLP2Q06481 763 aa15.65■□□□□ 0.1
AL441943.2-201ENST00000421077 IGF1RP08069 1367 aa15.61■□□□□ 0.09
AL441943.2-201ENST00000421077 RAD54L2Q9Y4B4 1467 aa15.61■□□□□ 0.09
AL441943.2-201ENST00000421077 ARAP1Q96P48 1450 aa15.6■□□□□ 0.09
AL441943.2-201ENST00000421077 HNRNPUL2Q1KMD3 747 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms