RNA–Protein interactions for RNA: ENST00000581977.6

IKBKE-203, Transcript of inhibitor of nuclear factor kappa B kinase subunit epsilon, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IKBKE, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKE-203ENST00000581977 NISCHQ9Y2I1 1504 aa22.93■■□□□ 1.26
IKBKE-203ENST00000581977 HRCP23327 699 aa20.28■□□□□ 0.84
IKBKE-203ENST00000581977 PPARGC1BQ86YN6 1023 aaKnown RBP20.03■□□□□ 0.8
IKBKE-203ENST00000581977 PELP1Q8IZL8 1130 aaKnown RBP20.03■□□□□ 0.8
IKBKE-203ENST00000581977 PCGF6Q9BYE7 350 aa19.85■□□□□ 0.77
IKBKE-203ENST00000581977 CCDC180Q9P1Z9 1646 aa19.85■□□□□ 0.77
IKBKE-203ENST00000581977 DCAF8L2P0C7V8 631 aa19.62■□□□□ 0.73
IKBKE-203ENST00000581977 SUPT5HO00267 1087 aaKnown RBP19.53■□□□□ 0.72
IKBKE-203ENST00000581977 SCAF1Q9H7N4 1312 aaKnown RBP19.46■□□□□ 0.71
IKBKE-203ENST00000581977 SHROOM4Q9ULL8 1493 aa19.43■□□□□ 0.7
IKBKE-203ENST00000581977 MYT1Q01538 1121 aa19.32■□□□□ 0.68
IKBKE-203ENST00000581977 MYO15BQ96JP2 1530 aa19.31■□□□□ 0.68
IKBKE-203ENST00000581977 ZCCHC6Q5VYS8 1495 aaKnown RBP19.31■□□□□ 0.68
IKBKE-203ENST00000581977 CHIC1Q5VXU3 224 aa19.16■□□□□ 0.66
IKBKE-203ENST00000581977 TRIM26Q12899 539 aaPredicted RBP18.95■□□□□ 0.62
IKBKE-203ENST00000581977 LOC105371045A0A1W2PR82 267 aa18.92■□□□□ 0.62
IKBKE-203ENST00000581977 ZEB1P37275 1124 aaPredicted RBP18.86■□□□□ 0.61
IKBKE-203ENST00000581977 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
IKBKE-203ENST00000581977 ACIN1Q9UKV3 1341 aaKnown RBP18.83■□□□□ 0.61
IKBKE-203ENST00000581977 NEUROD1Q13562 356 aa18.82■□□□□ 0.6
IKBKE-203ENST00000581977 ABCC9O60706 1549 aa18.79■□□□□ 0.6
IKBKE-203ENST00000581977 GTF3C3Q9Y5Q9 886 aa18.79■□□□□ 0.6
IKBKE-203ENST00000581977 CENPBP07199 599 aaPredicted RBP18.56■□□□□ 0.56
IKBKE-203ENST00000581977 SCRIBQ14160 1630 aa18.46■□□□□ 0.55
IKBKE-203ENST00000581977 NACADO15069 1562 aa18.41■□□□□ 0.54
IKBKE-203ENST00000581977 DIEXFQ68CQ4 756 aaKnown RBP18.36■□□□□ 0.53
IKBKE-203ENST00000581977 YTHDC1Q96MU7 727 aaKnown RBP18.28■□□□□ 0.52
IKBKE-203ENST00000581977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.27■□□□□ 0.52
IKBKE-203ENST00000581977 RB1CC1Q8TDY2 1594 aa18.25■□□□□ 0.51
IKBKE-203ENST00000581977 CCER1Q8TC90 406 aaPredicted RBP18.23■□□□□ 0.51
IKBKE-203ENST00000581977 BCL11AQ9H165 835 aa18.22■□□□□ 0.51
IKBKE-203ENST00000581977 EHMT2Q96KQ7 1210 aa18.21■□□□□ 0.51
IKBKE-203ENST00000581977 TTBK1Q5TCY1 1321 aaPredicted RBP18.15■□□□□ 0.5
IKBKE-203ENST00000581977 FAM9AQ8IZU1 332 aaPredicted RBP18.13■□□□□ 0.49
IKBKE-203ENST00000581977 UNC13AQ9UPW8 1703 aa18.11■□□□□ 0.49
IKBKE-203ENST00000581977 ANP32EQ9BTT0 268 aa17.95■□□□□ 0.46
IKBKE-203ENST00000581977 CECR2Q9BXF3 1484 aa17.92■□□□□ 0.46
IKBKE-203ENST00000581977 TRIM41Q8WV44 630 aa17.92■□□□□ 0.46
IKBKE-203ENST00000581977 RSF1Q96T23 1441 aaPredicted RBP17.88■□□□□ 0.45
IKBKE-203ENST00000581977 MIER1Q8N108 512 aa17.87■□□□□ 0.45
IKBKE-203ENST00000581977 ZNF316A6NFI3 1004 aaPredicted RBP17.86■□□□□ 0.45
IKBKE-203ENST00000581977 CSRNP3Q8WYN3 585 aa17.85■□□□□ 0.45
IKBKE-203ENST00000581977 BICRAQ9NZM4 1560 aa17.84■□□□□ 0.45
IKBKE-203ENST00000581977 MROH2BQ7Z745 1585 aa17.81■□□□□ 0.44
IKBKE-203ENST00000581977 PABPN1Q86U42 306 aaKnown RBP eCLIP17.78■□□□□ 0.44
IKBKE-203ENST00000581977 TSHZ2Q9NRE2 1034 aa17.74■□□□□ 0.43
IKBKE-203ENST00000581977 PRKCSHP14314 528 aaPredicted RBP17.72■□□□□ 0.43
IKBKE-203ENST00000581977 SUPT16HQ9Y5B9 1047 aaKnown RBP17.72■□□□□ 0.43
IKBKE-203ENST00000581977 WIZO95785 1651 aa17.71■□□□□ 0.43
IKBKE-203ENST00000581977 BAZ1AQ9NRL2 1556 aaPredicted RBP17.65■□□□□ 0.42
IKBKE-203ENST00000581977 SMARCA4P51532 1647 aa17.63■□□□□ 0.41
IKBKE-203ENST00000581977 BCANQ96GW7 911 aa17.49■□□□□ 0.39
IKBKE-203ENST00000581977 CLSPNQ9HAW4 1339 aa17.45■□□□□ 0.38
IKBKE-203ENST00000581977 TOP2AP11388 1531 aaKnown RBP17.4■□□□□ 0.38
IKBKE-203ENST00000581977 HNRNPUL2Q1KMD3 747 aaKnown RBP17.32■□□□□ 0.36
IKBKE-203ENST00000581977 PEG3Q9GZU2 1588 aa17.32■□□□□ 0.36
IKBKE-203ENST00000581977 RBM19Q9Y4C8 960 aaKnown RBP17.32■□□□□ 0.36
IKBKE-203ENST00000581977 SMARCA2P51531 1590 aa17.31■□□□□ 0.36
IKBKE-203ENST00000581977 EIF4G1Q04637 1599 aaKnown RBP17.28■□□□□ 0.36
IKBKE-203ENST00000581977 CCDC88BA6NC98 1476 aa17.27■□□□□ 0.36
IKBKE-203ENST00000581977 ATAD2BQ9ULI0 1458 aa17.26■□□□□ 0.35
IKBKE-203ENST00000581977 FKBP8Q14318 412 aa17.26■□□□□ 0.35
IKBKE-203ENST00000581977 ERICH6Q7L0X2 663 aa17.24■□□□□ 0.35
IKBKE-203ENST00000581977 MSH5O43196 834 aa17.19■□□□□ 0.34
IKBKE-203ENST00000581977 ITGAEP38570 1179 aa17.19■□□□□ 0.34
IKBKE-203ENST00000581977 BAZ1BQ9UIG0 1483 aaKnown RBP17.17■□□□□ 0.34
IKBKE-203ENST00000581977 KCNH8Q96L42 1107 aa17.15■□□□□ 0.34
IKBKE-203ENST00000581977 ANO8Q9HCE9 1232 aaPredicted RBP17.13■□□□□ 0.33
IKBKE-203ENST00000581977 ABCC8Q09428 1581 aa17.08■□□□□ 0.33
IKBKE-203ENST00000581977 NEFLP07196 543 aa17.07■□□□□ 0.32
IKBKE-203ENST00000581977 WRNQ14191 1432 aaPredicted RBP eCLIP17.07■□□□□ 0.32
IKBKE-203ENST00000581977 CEP162Q5TB80 1403 aa17.05■□□□□ 0.32
IKBKE-203ENST00000581977 RANGAP1P46060 587 aaPredicted RBP17.05■□□□□ 0.32
IKBKE-203ENST00000581977 DEKP35659 375 aaKnown RBP17.02■□□□□ 0.32
IKBKE-203ENST00000581977 HMGXB3Q12766 1538 aa17.02■□□□□ 0.32
IKBKE-203ENST00000581977 UBTFP17480 764 aaKnown RBP17.02■□□□□ 0.31
IKBKE-203ENST00000581977 NCAPD3P42695 1498 aa17.02■□□□□ 0.31
IKBKE-203ENST00000581977 CC2D2AQ9P2K1 1620 aa16.98■□□□□ 0.31
IKBKE-203ENST00000581977 APLP2Q06481 763 aa16.95■□□□□ 0.3
IKBKE-203ENST00000581977 SALL2Q9Y467 1007 aaPredicted RBP16.91■□□□□ 0.3
IKBKE-203ENST00000581977 TRIM52Q96A61 297 aa16.9■□□□□ 0.3
IKBKE-203ENST00000581977 CCDC136Q96JN2 1154 aa16.9■□□□□ 0.3
IKBKE-203ENST00000581977 FANCIQ9NVI1 1328 aa16.88■□□□□ 0.29
IKBKE-203ENST00000581977 NBR1Q14596 966 aa16.85■□□□□ 0.29
IKBKE-203ENST00000581977 CDK11AQ9UQ88 783 aaPredicted RBP16.85■□□□□ 0.29
IKBKE-203ENST00000581977 MYT1LQ9UL68 1186 aa16.84■□□□□ 0.29
IKBKE-203ENST00000581977 TNIKQ9UKE5 1360 aa16.84■□□□□ 0.29
IKBKE-203ENST00000581977 SYNJ1O43426 1573 aa16.83■□□□□ 0.28
IKBKE-203ENST00000581977 IRX6P78412 446 aaPredicted RBP16.81■□□□□ 0.28
IKBKE-203ENST00000581977 DDX10Q13206 875 aaKnown RBP16.8■□□□□ 0.28
IKBKE-203ENST00000581977 RTN4Q9NQC3 1192 aaKnown RBP16.77■□□□□ 0.27
IKBKE-203ENST00000581977 DHX57Q6P158 1386 aaKnown RBP16.76■□□□□ 0.27
IKBKE-203ENST00000581977 SOGA1O94964 1423 aa16.75■□□□□ 0.27
IKBKE-203ENST00000581977 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.75■□□□□ 0.27
IKBKE-203ENST00000581977 RUSC2Q8N2Y8 1516 aa16.73■□□□□ 0.27
IKBKE-203ENST00000581977 CFTRP13569 1480 aa16.72■□□□□ 0.27
IKBKE-203ENST00000581977 DNAJC5BQ9UF47 199 aa16.69■□□□□ 0.26
IKBKE-203ENST00000581977 PRDM2Q13029 1718 aa16.69■□□□□ 0.26
IKBKE-203ENST00000581977 IL27Q8NEV9 243 aa16.68■□□□□ 0.26
IKBKE-203ENST00000581977 TOP2BQ02880 1626 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms