RNA–Protein interactions for RNA: ENST00000243914.7

CTCFL-201, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-201ENST00000243914 NISCHQ9Y2I1 1504 aa23.65■■□□□ 1.38
CTCFL-201ENST00000243914 DCAF8L2P0C7V8 631 aa20.4■□□□□ 0.86
CTCFL-201ENST00000243914 SHROOM4Q9ULL8 1493 aa20.38■□□□□ 0.85
CTCFL-201ENST00000243914 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
CTCFL-201ENST00000243914 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
CTCFL-201ENST00000243914 SUPT5HO00267 1087 aaKnown RBP19.76■□□□□ 0.75
CTCFL-201ENST00000243914 ABCC9O60706 1549 aa19.54■□□□□ 0.72
CTCFL-201ENST00000243914 SCRIBQ14160 1630 aa19.16■□□□□ 0.66
CTCFL-201ENST00000243914 DCAF1Q9Y4B6 1507 aa19.14■□□□□ 0.66
CTCFL-201ENST00000243914 NACADO15069 1562 aa18.78■□□□□ 0.6
CTCFL-201ENST00000243914 PABPN1Q86U42 306 aaKnown RBP eCLIP18.76■□□□□ 0.59
CTCFL-201ENST00000243914 CHIC1Q5VXU3 224 aa18.73■□□□□ 0.59
CTCFL-201ENST00000243914 MYO15BQ96JP2 1530 aa18.7■□□□□ 0.58
CTCFL-201ENST00000243914 CECR2Q9BXF3 1484 aa18.69■□□□□ 0.58
CTCFL-201ENST00000243914 RB1CC1Q8TDY2 1594 aa18.65■□□□□ 0.58
CTCFL-201ENST00000243914 RSF1Q96T23 1441 aaPredicted RBP18.64■□□□□ 0.57
CTCFL-201ENST00000243914 MROH2BQ7Z745 1585 aa18.49■□□□□ 0.55
CTCFL-201ENST00000243914 EHMT2Q96KQ7 1210 aa18.45■□□□□ 0.54
CTCFL-201ENST00000243914 LOC105371045A0A1W2PR82 267 aa18.39■□□□□ 0.53
CTCFL-201ENST00000243914 UNC13AQ9UPW8 1703 aa18.38■□□□□ 0.53
CTCFL-201ENST00000243914 WIZO95785 1651 aa18.37■□□□□ 0.53
CTCFL-201ENST00000243914 FAM9AQ8IZU1 332 aaPredicted RBP18.37■□□□□ 0.53
CTCFL-201ENST00000243914 TRIM41Q8WV44 630 aa18.27■□□□□ 0.52
CTCFL-201ENST00000243914 BICRAQ9NZM4 1560 aa18.2■□□□□ 0.5
CTCFL-201ENST00000243914 BAZ1AQ9NRL2 1556 aaPredicted RBP18.16■□□□□ 0.5
CTCFL-201ENST00000243914 SMARCA4P51532 1647 aa18.1■□□□□ 0.49
CTCFL-201ENST00000243914 CCDC88BA6NC98 1476 aa17.98■□□□□ 0.47
CTCFL-201ENST00000243914 TOP2AP11388 1531 aaKnown RBP17.91■□□□□ 0.46
CTCFL-201ENST00000243914 ABCC8Q09428 1581 aa17.9■□□□□ 0.46
CTCFL-201ENST00000243914 PCGF6Q9BYE7 350 aa17.88■□□□□ 0.45
CTCFL-201ENST00000243914 SMARCA2P51531 1590 aa17.86■□□□□ 0.45
CTCFL-201ENST00000243914 ATAD2BQ9ULI0 1458 aa17.81■□□□□ 0.44
CTCFL-201ENST00000243914 PPARGC1BQ86YN6 1023 aaKnown RBP17.8■□□□□ 0.44
CTCFL-201ENST00000243914 BAZ1BQ9UIG0 1483 aaKnown RBP17.78■□□□□ 0.44
CTCFL-201ENST00000243914 TTBK1Q5TCY1 1321 aaPredicted RBP17.67■□□□□ 0.42
CTCFL-201ENST00000243914 EIF4G1Q04637 1599 aaKnown RBP17.67■□□□□ 0.42
CTCFL-201ENST00000243914 SOGA1O94964 1423 aa17.65■□□□□ 0.42
CTCFL-201ENST00000243914 RANGAP1P46060 587 aaPredicted RBP17.63■□□□□ 0.41
CTCFL-201ENST00000243914 RUSC2Q8N2Y8 1516 aa17.62■□□□□ 0.41
CTCFL-201ENST00000243914 PEG3Q9GZU2 1588 aa17.59■□□□□ 0.41
CTCFL-201ENST00000243914 UBTFP17480 764 aaKnown RBP17.55■□□□□ 0.4
CTCFL-201ENST00000243914 WRNQ14191 1432 aaPredicted RBP eCLIP17.54■□□□□ 0.4
CTCFL-201ENST00000243914 DNAJC5BQ9UF47 199 aa17.5■□□□□ 0.39
CTCFL-201ENST00000243914 CSRNP3Q8WYN3 585 aa17.47■□□□□ 0.39
CTCFL-201ENST00000243914 SYNJ1O43426 1573 aa17.45■□□□□ 0.38
CTCFL-201ENST00000243914 NCAPD3P42695 1498 aa17.45■□□□□ 0.38
CTCFL-201ENST00000243914 CC2D2AQ9P2K1 1620 aa17.4■□□□□ 0.38
CTCFL-201ENST00000243914 TRIM26Q12899 539 aaPredicted RBP17.39■□□□□ 0.37
CTCFL-201ENST00000243914 HMGXB3Q12766 1538 aa17.32■□□□□ 0.36
CTCFL-201ENST00000243914 HRCP23327 699 aa17.3■□□□□ 0.36
CTCFL-201ENST00000243914 CEP162Q5TB80 1403 aa17.26■□□□□ 0.35
CTCFL-201ENST00000243914 NESP48681 1621 aa17.25■□□□□ 0.35
CTCFL-201ENST00000243914 CFTRP13569 1480 aa17.22■□□□□ 0.35
CTCFL-201ENST00000243914 CUX1P39880 1505 aa17.2■□□□□ 0.34
CTCFL-201ENST00000243914 CADPSQ9ULU8 1353 aa17.2■□□□□ 0.34
CTCFL-201ENST00000243914 RAPGEF2Q9Y4G8 1499 aa17.18■□□□□ 0.34
CTCFL-201ENST00000243914 TNIKQ9UKE5 1360 aa17.15■□□□□ 0.34
CTCFL-201ENST00000243914 GOLGA3Q08378 1498 aa17.15■□□□□ 0.34
CTCFL-201ENST00000243914 TOP2BQ02880 1626 aa17.15■□□□□ 0.34
CTCFL-201ENST00000243914 EEA1Q15075 1411 aa17.13■□□□□ 0.33
CTCFL-201ENST00000243914 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.33
CTCFL-201ENST00000243914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.07■□□□□ 0.32
CTCFL-201ENST00000243914 FANCD2Q9BXW9 1451 aa17.06■□□□□ 0.32
CTCFL-201ENST00000243914 CLIP1P30622 1438 aa17.05■□□□□ 0.32
CTCFL-201ENST00000243914 CUX2O14529 1486 aa17.05■□□□□ 0.32
CTCFL-201ENST00000243914 BIVM-ERCC5R4GMW8 1640 aa17.02■□□□□ 0.32
CTCFL-201ENST00000243914 RAD54L2Q9Y4B4 1467 aa17.02■□□□□ 0.31
CTCFL-201ENST00000243914 P3H3Q8IVL6 736 aa17.01■□□□□ 0.31
CTCFL-201ENST00000243914 FGD5Q6ZNL6 1462 aa17.01■□□□□ 0.31
CTCFL-201ENST00000243914 KIF27Q86VH2 1401 aa17.01■□□□□ 0.31
CTCFL-201ENST00000243914 APLP2Q06481 763 aa16.96■□□□□ 0.31
CTCFL-201ENST00000243914 HNRNPUL2Q1KMD3 747 aaKnown RBP16.96■□□□□ 0.31
CTCFL-201ENST00000243914 ATP1B4Q9UN42 357 aaPredicted RBP16.94■□□□□ 0.3
CTCFL-201ENST00000243914 KIF21BO75037 1637 aa16.94■□□□□ 0.3
CTCFL-201ENST00000243914 IGF1RP08069 1367 aa16.92■□□□□ 0.3
CTCFL-201ENST00000243914 TDRD9Q8NDG6 1382 aaKnown RBP16.91■□□□□ 0.3
CTCFL-201ENST00000243914 CCER1Q8TC90 406 aaPredicted RBP16.9■□□□□ 0.3
CTCFL-201ENST00000243914 PRXQ9BXM0 1461 aa16.9■□□□□ 0.3
CTCFL-201ENST00000243914 CARMIL1Q5VZK9 1371 aa16.86■□□□□ 0.29
CTCFL-201ENST00000243914 TOPBP1Q92547 1522 aa16.86■□□□□ 0.29
CTCFL-201ENST00000243914 POLA1P09884 1462 aaPredicted RBP16.85■□□□□ 0.29
CTCFL-201ENST00000243914 PRDM2Q13029 1718 aa16.84■□□□□ 0.29
CTCFL-201ENST00000243914 KANK4Q5T7N3 995 aaPredicted RBP16.84■□□□□ 0.29
CTCFL-201ENST00000243914 URB2Q14146 1524 aaKnown RBP16.84■□□□□ 0.29
CTCFL-201ENST00000243914 VPS8Q8N3P4 1428 aa16.82■□□□□ 0.28
CTCFL-201ENST00000243914 ITGAEP38570 1179 aa16.8■□□□□ 0.28
CTCFL-201ENST00000243914 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
CTCFL-201ENST00000243914 PDS5BQ9NTI5 1447 aa16.78■□□□□ 0.28
CTCFL-201ENST00000243914 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.27
CTCFL-201ENST00000243914 KIF21AQ7Z4S6 1674 aa16.76■□□□□ 0.27
CTCFL-201ENST00000243914 LAMC3Q9Y6N6 1575 aa16.74■□□□□ 0.27
CTCFL-201ENST00000243914 ERICH3Q5RHP9 1530 aa16.73■□□□□ 0.27
CTCFL-201ENST00000243914 ARID3CA6NKF2 412 aa16.72■□□□□ 0.27
CTCFL-201ENST00000243914 ARHGAP35Q9NRY4 1499 aa16.71■□□□□ 0.27
CTCFL-201ENST00000243914 AQRO60306 1485 aaKnown RBP eCLIP16.69■□□□□ 0.263e-6■■■□□ 17.6
CTCFL-201ENST00000243914 ABCA10Q8WWZ4 1543 aa16.66■□□□□ 0.26
CTCFL-201ENST00000243914 FHOD3Q2V2M9 1422 aa16.65■□□□□ 0.26
CTCFL-201ENST00000243914 FBLN2P98095 1184 aa16.64■□□□□ 0.25
CTCFL-201ENST00000243914 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
CTCFL-201ENST00000243914 GAPVD1Q14C86 1478 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms