RNA–Protein interactions for RNA: ENST00000637806.1

SMARCA2-263, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 7,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-263ENST00000637806 DCAF8L2P0C7V8 631 aa18.55■□□□□ 0.56
SMARCA2-263ENST00000637806 NISCHQ9Y2I1 1504 aa16.88■□□□□ 0.29
SMARCA2-263ENST00000637806 SHROOM4Q9ULL8 1493 aa16.23■□□□□ 0.19
SMARCA2-263ENST00000637806 ABCC9O60706 1549 aa16.08■□□□□ 0.17
SMARCA2-263ENST00000637806 FAM9AQ8IZU1 332 aaPredicted RBP16.08■□□□□ 0.17
SMARCA2-263ENST00000637806 SUPT5HO00267 1087 aaKnown RBP16.07■□□□□ 0.16
SMARCA2-263ENST00000637806 EHMT2Q96KQ7 1210 aa15.94■□□□□ 0.14
SMARCA2-263ENST00000637806 PABPN1Q86U42 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
SMARCA2-263ENST00000637806 TTBK1Q5TCY1 1321 aaPredicted RBP15.73■□□□□ 0.11
SMARCA2-263ENST00000637806 RANGAP1P46060 587 aaPredicted RBP15.62■□□□□ 0.09
SMARCA2-263ENST00000637806 ATP1B4Q9UN42 357 aaPredicted RBP15.61■□□□□ 0.09
SMARCA2-263ENST00000637806 MYT1LQ9UL68 1186 aa15.57■□□□□ 0.08
SMARCA2-263ENST00000637806 FBLN2P98095 1184 aa15.42■□□□□ 0.06
SMARCA2-263ENST00000637806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.35■□□□□ 0.05
SMARCA2-263ENST00000637806 HNRNPUL2Q1KMD3 747 aaKnown RBP15.35■□□□□ 0.05
SMARCA2-263ENST00000637806 APLP2Q06481 763 aa15.32■□□□□ 0.04
SMARCA2-263ENST00000637806 CHIC1Q5VXU3 224 aa15.28■□□□□ 0.04
SMARCA2-263ENST00000637806 PLPPR3Q6T4P5 718 aa15.1■□□□□ 0.01
SMARCA2-263ENST00000637806 TRHP20396 242 aaPredicted RBP15.03■□□□□ -0
SMARCA2-263ENST00000637806 TRIM41Q8WV44 630 aa15□□□□□ -0.01
SMARCA2-263ENST00000637806 UBTFP17480 764 aaKnown RBP14.96□□□□□ -0.01
SMARCA2-263ENST00000637806 NPM1P06748 294 aaKnown RBP eCLIP14.88□□□□□ -0.03
SMARCA2-263ENST00000637806 AEBP2Q6ZN18 517 aaPredicted RBP14.87□□□□□ -0.03
SMARCA2-263ENST00000637806 ERCC6Q03468 1493 aa14.75□□□□□ -0.05
SMARCA2-263ENST00000637806 ESF1Q9H501 851 aaKnown RBP14.74□□□□□ -0.05
SMARCA2-263ENST00000637806 BCANQ96GW7 911 aa14.7□□□□□ -0.06
SMARCA2-263ENST00000637806 ARID3CA6NKF2 412 aa14.63□□□□□ -0.07
SMARCA2-263ENST00000637806 SCRIBQ14160 1630 aa14.61□□□□□ -0.07
SMARCA2-263ENST00000637806 RB1CC1Q8TDY2 1594 aa14.56□□□□□ -0.08
SMARCA2-263ENST00000637806 CHMP7Q8WUX9 453 aaPredicted RBP14.55□□□□□ -0.08
SMARCA2-263ENST00000637806 ARID4BQ4LE39 1312 aaPredicted RBP14.46□□□□□ -0.09
SMARCA2-263ENST00000637806 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
SMARCA2-263ENST00000637806 ITGAEP38570 1179 aa14.44□□□□□ -0.1
SMARCA2-263ENST00000637806 SENP3Q9H4L4 574 aaPredicted RBP14.38□□□□□ -0.11
SMARCA2-263ENST00000637806 P3H3Q8IVL6 736 aa14.36□□□□□ -0.11
SMARCA2-263ENST00000637806 STAG3Q9UJ98 1225 aa14.35□□□□□ -0.11
SMARCA2-263ENST00000637806 SCAF1Q9H7N4 1312 aaKnown RBP14.34□□□□□ -0.11
SMARCA2-263ENST00000637806 ZNF777Q9ULD5 760 aaPredicted RBP14.29□□□□□ -0.12
SMARCA2-263ENST00000637806 KCNH8Q96L42 1107 aa14.26□□□□□ -0.13
SMARCA2-263ENST00000637806 POLR3GLQ9BT43 218 aa14.22□□□□□ -0.13
SMARCA2-263ENST00000637806 PPARGC1BQ86YN6 1023 aaKnown RBP14.22□□□□□ -0.13
SMARCA2-263ENST00000637806 CYB5RLQ6IPT4 315 aa14.19□□□□□ -0.14
SMARCA2-263ENST00000637806 CCDC180Q9P1Z9 1646 aa14.18□□□□□ -0.14
SMARCA2-263ENST00000637806 CECR2Q9BXF3 1484 aa14.17□□□□□ -0.14
SMARCA2-263ENST00000637806 CHGAP10645 457 aaKnown RBP14.15□□□□□ -0.14
SMARCA2-263ENST00000637806 C14orf37Q86TY3 774 aa14.15□□□□□ -0.14
SMARCA2-263ENST00000637806 PLEKHG5O94827 1062 aa14.13□□□□□ -0.15
SMARCA2-263ENST00000637806 A0A0G2JS52 829 aa14.12□□□□□ -0.15
SMARCA2-263ENST00000637806 MYT1Q01538 1121 aa14.12□□□□□ -0.15
SMARCA2-263ENST00000637806 NACADO15069 1562 aa14.11□□□□□ -0.15
SMARCA2-263ENST00000637806 FAM50AQ14320 339 aaKnown RBP14.11□□□□□ -0.15
SMARCA2-263ENST00000637806 CDK11AQ9UQ88 783 aaPredicted RBP14.09□□□□□ -0.15
SMARCA2-263ENST00000637806 MLECQ14165 292 aa14.07□□□□□ -0.16
SMARCA2-263ENST00000637806 TRIM52Q96A61 297 aa14.06□□□□□ -0.16
SMARCA2-263ENST00000637806 SLC24A1O60721 1099 aa14.06□□□□□ -0.16
SMARCA2-263ENST00000637806 CNGB1Q14028 1251 aaPredicted RBP14.05□□□□□ -0.16
SMARCA2-263ENST00000637806 OSCARQ8IYS5 282 aa14.04□□□□□ -0.16
SMARCA2-263ENST00000637806 PELP1Q8IZL8 1130 aaKnown RBP14.03□□□□□ -0.16
SMARCA2-263ENST00000637806 PCGF6Q9BYE7 350 aa14.01□□□□□ -0.17
SMARCA2-263ENST00000637806 HAP1P54257 671 aaPredicted RBP13.99□□□□□ -0.17
SMARCA2-263ENST00000637806 BAZ1BQ9UIG0 1483 aaKnown RBP13.99□□□□□ -0.17
SMARCA2-263ENST00000637806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.93□□□□□ -0.18
SMARCA2-263ENST00000637806 DNAJC5BQ9UF47 199 aa13.9□□□□□ -0.18
SMARCA2-263ENST00000637806 PPP1R15AO75807 674 aaPredicted RBP13.89□□□□□ -0.19
SMARCA2-263ENST00000637806 ZNF326Q5BKZ1 582 aaKnown RBP13.89□□□□□ -0.19
SMARCA2-263ENST00000637806 PDS5BQ9NTI5 1447 aa13.87□□□□□ -0.19
SMARCA2-263ENST00000637806 PHF23Q9BUL5 403 aaPredicted RBP13.86□□□□□ -0.19
SMARCA2-263ENST00000637806 ZBTB7CA1YPR0 619 aa13.84□□□□□ -0.19
SMARCA2-263ENST00000637806 PLEKHD1A6NEE1 506 aa13.8□□□□□ -0.2
SMARCA2-263ENST00000637806 CCER1Q8TC90 406 aaPredicted RBP13.77□□□□□ -0.21
SMARCA2-263ENST00000637806 LMOD2Q6P5Q4 547 aa13.75□□□□□ -0.21
SMARCA2-263ENST00000637806 SMARCA2P51531 1590 aa13.72□□□□□ -0.21
SMARCA2-263ENST00000637806 TSPY4P0CV99 314 aa13.72□□□□□ -0.21
SMARCA2-263ENST00000637806 TSPY10P0CW01 314 aa13.72□□□□□ -0.21
SMARCA2-263ENST00000637806 ZCCHC6Q5VYS8 1495 aaKnown RBP13.69□□□□□ -0.22
SMARCA2-263ENST00000637806 FAM69CQ0P6D2 419 aa13.68□□□□□ -0.22
SMARCA2-263ENST00000637806 LOC105371045A0A1W2PR82 267 aa13.65□□□□□ -0.22
SMARCA2-263ENST00000637806 CSRNP3Q8WYN3 585 aa13.62□□□□□ -0.23
SMARCA2-263ENST00000637806 EIF4G1Q04637 1599 aaKnown RBP13.6□□□□□ -0.23
SMARCA2-263ENST00000637806 CCDC9Q9Y3X0 531 aaKnown RBP13.6□□□□□ -0.23
SMARCA2-263ENST00000637806 CHIC2Q9UKJ5 165 aa13.59□□□□□ -0.23
SMARCA2-263ENST00000637806 TDRD9Q8NDG6 1382 aaKnown RBP13.58□□□□□ -0.24
SMARCA2-263ENST00000637806 MEX3CQ5U5Q3 659 aaKnown RBP13.58□□□□□ -0.24
SMARCA2-263ENST00000637806 NEUROD1Q13562 356 aa13.57□□□□□ -0.24
SMARCA2-263ENST00000637806 GGT6Q6P531 493 aa13.55□□□□□ -0.24
SMARCA2-263ENST00000637806 NPM2Q86SE8 214 aaKnown RBP13.55□□□□□ -0.24
SMARCA2-263ENST00000637806 CEP164Q9UPV0 1460 aa13.51□□□□□ -0.25
SMARCA2-263ENST00000637806 DCAF8L1A6NGE4 600 aa13.51□□□□□ -0.25
SMARCA2-263ENST00000637806 NEFMP07197 916 aa13.51□□□□□ -0.25
SMARCA2-263ENST00000637806 SOGA1O94964 1423 aa13.48□□□□□ -0.25
SMARCA2-263ENST00000637806 ARXQ96QS3 562 aa13.46□□□□□ -0.25
SMARCA2-263ENST00000637806 MTUS2Q5JR59 1369 aa13.46□□□□□ -0.26
SMARCA2-263ENST00000637806 CFDP1Q9UEE9 299 aaPredicted RBP13.45□□□□□ -0.26
SMARCA2-263ENST00000637806 CARMIL2Q6F5E8 1435 aa13.44□□□□□ -0.26
SMARCA2-263ENST00000637806 NPHP1O15259 732 aa13.44□□□□□ -0.26
SMARCA2-263ENST00000637806 BCL11AQ9H165 835 aa13.43□□□□□ -0.26
SMARCA2-263ENST00000637806 BAZ1AQ9NRL2 1556 aaPredicted RBP13.43□□□□□ -0.26
SMARCA2-263ENST00000637806 CADPSQ9ULU8 1353 aa13.42□□□□□ -0.26
SMARCA2-263ENST00000637806 HDGFP51858 240 aaKnown RBP13.42□□□□□ -0.26
SMARCA2-263ENST00000637806 JPH4Q96JJ6 628 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms