RNA–Protein interactions for RNA: ENST00000295050.11

SPRTN-202, Transcript of SprT-like N-terminal domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRTN, Length 3,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRTN-202ENST00000295050 NISCHQ9Y2I1 1504 aa22.33■■□□□ 1.17
SPRTN-202ENST00000295050 HRCP23327 699 aa20.46■□□□□ 0.87
SPRTN-202ENST00000295050 SHROOM4Q9ULL8 1493 aa20.2■□□□□ 0.82
SPRTN-202ENST00000295050 SUPT5HO00267 1087 aaKnown RBP20.2■□□□□ 0.82
SPRTN-202ENST00000295050 PCGF6Q9BYE7 350 aa20.15■□□□□ 0.82
SPRTN-202ENST00000295050 PPARGC1BQ86YN6 1023 aaKnown RBP20.14■□□□□ 0.81
SPRTN-202ENST00000295050 PELP1Q8IZL8 1130 aaKnown RBP19.9■□□□□ 0.78
SPRTN-202ENST00000295050 MYO15BQ96JP2 1530 aa19.79■□□□□ 0.76
SPRTN-202ENST00000295050 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
SPRTN-202ENST00000295050 SCAF1Q9H7N4 1312 aaKnown RBP19.43■□□□□ 0.7
SPRTN-202ENST00000295050 LOC105371045A0A1W2PR82 267 aa19.38■□□□□ 0.69
SPRTN-202ENST00000295050 TRIM26Q12899 539 aaPredicted RBP19.37■□□□□ 0.69
SPRTN-202ENST00000295050 DCAF1Q9Y4B6 1507 aa19.36■□□□□ 0.69
SPRTN-202ENST00000295050 ZEB1P37275 1124 aaPredicted RBP19.24■□□□□ 0.67
SPRTN-202ENST00000295050 MYT1Q01538 1121 aa19.14■□□□□ 0.65
SPRTN-202ENST00000295050 CCDC180Q9P1Z9 1646 aa19.13■□□□□ 0.65
SPRTN-202ENST00000295050 DCAF8L2P0C7V8 631 aa19.07■□□□□ 0.64
SPRTN-202ENST00000295050 ZCCHC6Q5VYS8 1495 aaKnown RBP18.99■□□□□ 0.63
SPRTN-202ENST00000295050 ACIN1Q9UKV3 1341 aaKnown RBP18.94■□□□□ 0.62
SPRTN-202ENST00000295050 NEUROD1Q13562 356 aa18.9■□□□□ 0.62
SPRTN-202ENST00000295050 GTF3C3Q9Y5Q9 886 aa18.87■□□□□ 0.61
SPRTN-202ENST00000295050 CENPBP07199 599 aaPredicted RBP18.8■□□□□ 0.6
SPRTN-202ENST00000295050 EHMT2Q96KQ7 1210 aa18.77■□□□□ 0.6
SPRTN-202ENST00000295050 FAM9AQ8IZU1 332 aaPredicted RBP18.73■□□□□ 0.59
SPRTN-202ENST00000295050 CCER1Q8TC90 406 aaPredicted RBP18.65■□□□□ 0.58
SPRTN-202ENST00000295050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.64■□□□□ 0.57
SPRTN-202ENST00000295050 DIEXFQ68CQ4 756 aaKnown RBP18.64■□□□□ 0.57
SPRTN-202ENST00000295050 TRIM41Q8WV44 630 aa18.61■□□□□ 0.57
SPRTN-202ENST00000295050 YTHDC1Q96MU7 727 aaKnown RBP18.5■□□□□ 0.55
SPRTN-202ENST00000295050 TTBK1Q5TCY1 1321 aaPredicted RBP18.34■□□□□ 0.53
SPRTN-202ENST00000295050 ZNF316A6NFI3 1004 aaPredicted RBP18.21■□□□□ 0.51
SPRTN-202ENST00000295050 MIER1Q8N108 512 aa18.12■□□□□ 0.49
SPRTN-202ENST00000295050 RSF1Q96T23 1441 aaPredicted RBP18.07■□□□□ 0.48
SPRTN-202ENST00000295050 ABCC9O60706 1549 aa18.06■□□□□ 0.48
SPRTN-202ENST00000295050 RB1CC1Q8TDY2 1594 aa18.04■□□□□ 0.48
SPRTN-202ENST00000295050 BCL11AQ9H165 835 aa17.95■□□□□ 0.46
SPRTN-202ENST00000295050 ANP32EQ9BTT0 268 aa17.91■□□□□ 0.46
SPRTN-202ENST00000295050 SUPT16HQ9Y5B9 1047 aaKnown RBP17.87■□□□□ 0.45
SPRTN-202ENST00000295050 HNRNPUL2Q1KMD3 747 aaKnown RBP17.83■□□□□ 0.45
SPRTN-202ENST00000295050 TSHZ2Q9NRE2 1034 aa17.8■□□□□ 0.44
SPRTN-202ENST00000295050 SCRIBQ14160 1630 aa17.79■□□□□ 0.44
SPRTN-202ENST00000295050 CLSPNQ9HAW4 1339 aa17.76■□□□□ 0.43
SPRTN-202ENST00000295050 CSRNP3Q8WYN3 585 aa17.74■□□□□ 0.43
SPRTN-202ENST00000295050 CEP162Q5TB80 1403 aa17.73■□□□□ 0.43
SPRTN-202ENST00000295050 UBTFP17480 764 aaKnown RBP17.72■□□□□ 0.43
SPRTN-202ENST00000295050 WRNQ14191 1432 aaPredicted RBP eCLIP17.71■□□□□ 0.43
SPRTN-202ENST00000295050 BCANQ96GW7 911 aa17.66■□□□□ 0.42
SPRTN-202ENST00000295050 CECR2Q9BXF3 1484 aa17.55■□□□□ 0.4
SPRTN-202ENST00000295050 TNIKQ9UKE5 1360 aa17.55■□□□□ 0.4
SPRTN-202ENST00000295050 MROH2BQ7Z745 1585 aa17.51■□□□□ 0.39
SPRTN-202ENST00000295050 APLP2Q06481 763 aa17.5■□□□□ 0.39
SPRTN-202ENST00000295050 CCDC88BA6NC98 1476 aa17.49■□□□□ 0.39
SPRTN-202ENST00000295050 FKBP8Q14318 412 aa17.48■□□□□ 0.39
SPRTN-202ENST00000295050 SOGA1O94964 1423 aa17.47■□□□□ 0.39
SPRTN-202ENST00000295050 ABCC8Q09428 1581 aa17.47■□□□□ 0.39
SPRTN-202ENST00000295050 WIZO95785 1651 aa17.47■□□□□ 0.39
SPRTN-202ENST00000295050 RANGAP1P46060 587 aaPredicted RBP17.42■□□□□ 0.38
SPRTN-202ENST00000295050 RBM19Q9Y4C8 960 aaKnown RBP17.41■□□□□ 0.38
SPRTN-202ENST00000295050 NEFLP07196 543 aa17.4■□□□□ 0.38
SPRTN-202ENST00000295050 KCNH8Q96L42 1107 aa17.4■□□□□ 0.38
SPRTN-202ENST00000295050 ITGAEP38570 1179 aa17.35■□□□□ 0.37
SPRTN-202ENST00000295050 RUSC2Q8N2Y8 1516 aa17.34■□□□□ 0.37
SPRTN-202ENST00000295050 ERICH6Q7L0X2 663 aa17.34■□□□□ 0.37
SPRTN-202ENST00000295050 GOLGA3Q08378 1498 aa17.33■□□□□ 0.37
SPRTN-202ENST00000295050 EIF4G1Q04637 1599 aaKnown RBP17.29■□□□□ 0.36
SPRTN-202ENST00000295050 EEA1Q15075 1411 aa17.28■□□□□ 0.36
SPRTN-202ENST00000295050 DHX57Q6P158 1386 aaKnown RBP17.27■□□□□ 0.35
SPRTN-202ENST00000295050 BAZ1AQ9NRL2 1556 aaPredicted RBP17.26■□□□□ 0.35
SPRTN-202ENST00000295050 CLIP1P30622 1438 aa17.26■□□□□ 0.35
SPRTN-202ENST00000295050 TRIM52Q96A61 297 aa17.2■□□□□ 0.34
SPRTN-202ENST00000295050 MSH5O43196 834 aa17.2■□□□□ 0.34
SPRTN-202ENST00000295050 VPS8Q8N3P4 1428 aa17.2■□□□□ 0.34
SPRTN-202ENST00000295050 PRKCSHP14314 528 aaPredicted RBP17.19■□□□□ 0.34
SPRTN-202ENST00000295050 DDX10Q13206 875 aaKnown RBP17.19■□□□□ 0.34
SPRTN-202ENST00000295050 CEP164Q9UPV0 1460 aa17.13■□□□□ 0.33
SPRTN-202ENST00000295050 NACADO15069 1562 aa17.09■□□□□ 0.33
SPRTN-202ENST00000295050 CDK11AQ9UQ88 783 aaPredicted RBP17.09■□□□□ 0.33
SPRTN-202ENST00000295050 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
SPRTN-202ENST00000295050 IRX6P78412 446 aaPredicted RBP17.05■□□□□ 0.32
SPRTN-202ENST00000295050 HIRIP3Q9BW71 556 aaPredicted RBP17.03■□□□□ 0.32
SPRTN-202ENST00000295050 SMARCA2P51531 1590 aa17.03■□□□□ 0.32
SPRTN-202ENST00000295050 FANCIQ9NVI1 1328 aa17.02■□□□□ 0.32
SPRTN-202ENST00000295050 ANP32CO43423 234 aa17.02■□□□□ 0.32
SPRTN-202ENST00000295050 DEKP35659 375 aaKnown RBP17.02■□□□□ 0.32
SPRTN-202ENST00000295050 KANK4Q5T7N3 995 aaPredicted RBP17.01■□□□□ 0.31
SPRTN-202ENST00000295050 RAPGEF2Q9Y4G8 1499 aa16.97■□□□□ 0.31
SPRTN-202ENST00000295050 MYT1LQ9UL68 1186 aa16.97■□□□□ 0.31
SPRTN-202ENST00000295050 KIF21BO75037 1637 aa16.96■□□□□ 0.31
SPRTN-202ENST00000295050 NBR1Q14596 966 aa16.93■□□□□ 0.3
SPRTN-202ENST00000295050 CCER2I3L3R5 266 aa16.91■□□□□ 0.3
SPRTN-202ENST00000295050 SIN3AQ96ST3 1273 aa16.91■□□□□ 0.3
SPRTN-202ENST00000295050 HNRNPUQ00839 825 aaKnown RBP eCLIP16.9■□□□□ 0.3
SPRTN-202ENST00000295050 BAZ1BQ9UIG0 1483 aaKnown RBP16.9■□□□□ 0.3
SPRTN-202ENST00000295050 PPP1R15AO75807 674 aaPredicted RBP16.89■□□□□ 0.29
SPRTN-202ENST00000295050 CCNB3Q8WWL7 1395 aa16.88■□□□□ 0.29
SPRTN-202ENST00000295050 RAB3GAP2Q9H2M9 1393 aa16.87■□□□□ 0.29
SPRTN-202ENST00000295050 ANO8Q9HCE9 1232 aaPredicted RBP16.86■□□□□ 0.29
SPRTN-202ENST00000295050 SMARCA4P51532 1647 aa16.84■□□□□ 0.29
SPRTN-202ENST00000295050 WDR97A6NE52 1622 aa16.84■□□□□ 0.29
SPRTN-202ENST00000295050 RRBP1Q9P2E9 1410 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms