Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CPPED1Q9BRF8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.61■□□□□ 0.57
CPPED1Q9BRF8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPPED1Q9BRF8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 AC093503.3-201ENST00000624917 2352 ntBASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 HLA-G-202ENST00000376815 851 ntBASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 HLA-G-203ENST00000376818 1127 ntBASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 CYP2T3P-201ENST00000601990 817 ntBASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.6■□□□□ 0.57
CPPED1Q9BRF8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 DUX4L16-201ENST00000555130 1264 ntBASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPPED1Q9BRF8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.58■□□□□ 0.57
CPPED1Q9BRF8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.58■□□□□ 0.57
CPPED1Q9BRF8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CPPED1Q9BRF8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.58■□□□□ 0.57
CPPED1Q9BRF8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPPED1Q9BRF8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPPED1Q9BRF8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPPED1Q9BRF8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 AC137761.2-201ENST00000561729 223 ntBASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 AC145350.3-201ENST00000569033 163 ntBASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CPPED1Q9BRF8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.57■□□□□ 0.56
CPPED1Q9BRF8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.57■□□□□ 0.56
CPPED1Q9BRF8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CPPED1Q9BRF8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.57■□□□□ 0.56
CPPED1Q9BRF8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CPPED1Q9BRF8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
CPPED1Q9BRF8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms