Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
NEK1Q96PY6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.45■■□□□ 1.34
NEK1Q96PY6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.45■■□□□ 1.34
NEK1Q96PY6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.45■■□□□ 1.34
NEK1Q96PY6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.45■■□□□ 1.34
NEK1Q96PY6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.45■■□□□ 1.34
NEK1Q96PY6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
NEK1Q96PY6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.45■■□□□ 1.34
NEK1Q96PY6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.45■■□□□ 1.34
NEK1Q96PY6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC23.45■■□□□ 1.34
NEK1Q96PY6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
NEK1Q96PY6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
NEK1Q96PY6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.45■■□□□ 1.34
NEK1Q96PY6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.44■■□□□ 1.34
NEK1Q96PY6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
NEK1Q96PY6 AC018553.1-201ENST00000616682 1458 ntBASIC23.44■■□□□ 1.34
NEK1Q96PY6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.44■■□□□ 1.34
NEK1Q96PY6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
NEK1Q96PY6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.44■■□□□ 1.34
NEK1Q96PY6 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.44■■□□□ 1.34
NEK1Q96PY6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
NEK1Q96PY6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC23.44■■□□□ 1.34
NEK1Q96PY6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
NEK1Q96PY6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.44■■□□□ 1.34
NEK1Q96PY6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.44■■□□□ 1.34
NEK1Q96PY6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.44■■□□□ 1.34
NEK1Q96PY6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.44■■□□□ 1.34
NEK1Q96PY6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
NEK1Q96PY6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
NEK1Q96PY6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.44■■□□□ 1.34
NEK1Q96PY6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.44■■□□□ 1.34
NEK1Q96PY6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NEK1Q96PY6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NEK1Q96PY6 TREX1-205ENST00000625293 1783 ntBASIC23.44■■□□□ 1.34
NEK1Q96PY6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NEK1Q96PY6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
NEK1Q96PY6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.44■■□□□ 1.34
NEK1Q96PY6 AC116351.2-201ENST00000606540 1585 ntBASIC23.44■■□□□ 1.34
NEK1Q96PY6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.43■■□□□ 1.34
NEK1Q96PY6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.43■■□□□ 1.34
NEK1Q96PY6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NEK1Q96PY6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
NEK1Q96PY6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
NEK1Q96PY6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NEK1Q96PY6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.43■■□□□ 1.34
NEK1Q96PY6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.43■■□□□ 1.34
NEK1Q96PY6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
NEK1Q96PY6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.43■■□□□ 1.34
NEK1Q96PY6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
NEK1Q96PY6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.43■■□□□ 1.34
NEK1Q96PY6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.43■■□□□ 1.34
NEK1Q96PY6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.43■■□□□ 1.34
NEK1Q96PY6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.43■■□□□ 1.34
NEK1Q96PY6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.43■■□□□ 1.34
NEK1Q96PY6 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
NEK1Q96PY6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
NEK1Q96PY6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NEK1Q96PY6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC23.43■■□□□ 1.34
NEK1Q96PY6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
NEK1Q96PY6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
NEK1Q96PY6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NEK1Q96PY6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
NEK1Q96PY6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
NEK1Q96PY6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
NEK1Q96PY6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NEK1Q96PY6 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
NEK1Q96PY6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.42■■□□□ 1.34
NEK1Q96PY6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
NEK1Q96PY6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
NEK1Q96PY6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NEK1Q96PY6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.42■■□□□ 1.34
NEK1Q96PY6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
NEK1Q96PY6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.42■■□□□ 1.34
NEK1Q96PY6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.42■■□□□ 1.34
NEK1Q96PY6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.42■■□□□ 1.34
NEK1Q96PY6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.42■■□□□ 1.34
NEK1Q96PY6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.42■■□□□ 1.34
NEK1Q96PY6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
NEK1Q96PY6 AC124283.5-201ENST00000624661 1809 ntBASIC23.42■■□□□ 1.34
NEK1Q96PY6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
NEK1Q96PY6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
NEK1Q96PY6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NEK1Q96PY6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC23.41■■□□□ 1.34
NEK1Q96PY6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NEK1Q96PY6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NEK1Q96PY6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NEK1Q96PY6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.41■■□□□ 1.34
NEK1Q96PY6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.41■■□□□ 1.34
NEK1Q96PY6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.41■■□□□ 1.34
NEK1Q96PY6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.41■■□□□ 1.34
NEK1Q96PY6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NEK1Q96PY6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NEK1Q96PY6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
NEK1Q96PY6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NEK1Q96PY6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NEK1Q96PY6 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
NEK1Q96PY6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
NEK1Q96PY6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.4■■□□□ 1.34
NEK1Q96PY6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.4■■□□□ 1.34
NEK1Q96PY6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms