Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RSPO1Q2MKA7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RSPO1Q2MKA7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RSPO1Q2MKA7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.18■□□□□ 0.34
RSPO1Q2MKA7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.18■□□□□ 0.34
RSPO1Q2MKA7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 AC092368.3-202ENST00000574180 1591 ntBASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 AC007952.6-201ENST00000573168 2673 ntBASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 AC003957.1-201ENST00000625108 2673 ntBASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RSPO1Q2MKA7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 PNMA6B-201ENST00000538162 1200 ntBASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 AC060766.5-201ENST00000590539 871 ntBASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RSPO1Q2MKA7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 AC093484.2-201ENST00000580996 2166 ntBASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 RPS2P52-201ENST00000469610 820 ntBASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.15■□□□□ 0.34
RSPO1Q2MKA7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
RSPO1Q2MKA7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 ID1-201ENST00000376105 1233 ntBASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RSPO1Q2MKA7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms