Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
CDR1P51861 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDR1P51861 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDR1P51861 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDR1P51861 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CDR1P51861 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDR1P51861 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDR1P51861 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
CDR1P51861 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDR1P51861 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.57■■□□□ 1.04
CDR1P51861 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CDR1P51861 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDR1P51861 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CDR1P51861 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDR1P51861 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDR1P51861 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDR1P51861 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.57■■□□□ 1.04
CDR1P51861 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.57■■□□□ 1.04
CDR1P51861 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CDR1P51861 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.57■■□□□ 1.04
CDR1P51861 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDR1P51861 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CDR1P51861 HLA-B-256ENST00000639848 1089 ntBASIC21.57■■□□□ 1.04
CDR1P51861 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.57■■□□□ 1.04
CDR1P51861 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDR1P51861 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.57■■□□□ 1.04
CDR1P51861 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.57■■□□□ 1.04
CDR1P51861 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDR1P51861 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDR1P51861 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDR1P51861 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDR1P51861 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CDR1P51861 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.56■■□□□ 1.04
CDR1P51861 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.56■■□□□ 1.04
CDR1P51861 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CDR1P51861 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.56■■□□□ 1.04
CDR1P51861 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.56■■□□□ 1.04
CDR1P51861 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CDR1P51861 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.56■■□□□ 1.04
CDR1P51861 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CDR1P51861 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CDR1P51861 GABARAPL3-202ENST00000624044 1851 ntBASIC21.56■■□□□ 1.04
CDR1P51861 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDR1P51861 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CDR1P51861 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDR1P51861 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDR1P51861 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDR1P51861 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDR1P51861 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDR1P51861 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDR1P51861 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CDR1P51861 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.55■■□□□ 1.04
CDR1P51861 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDR1P51861 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.55■■□□□ 1.04
CDR1P51861 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.55■■□□□ 1.04
CDR1P51861 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.55■■□□□ 1.04
CDR1P51861 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.55■■□□□ 1.04
CDR1P51861 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDR1P51861 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CDR1P51861 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.55■■□□□ 1.04
CDR1P51861 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDR1P51861 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDR1P51861 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDR1P51861 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.55■■□□□ 1.04
CDR1P51861 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDR1P51861 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDR1P51861 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDR1P51861 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.55■■□□□ 1.04
CDR1P51861 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CDR1P51861 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDR1P51861 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDR1P51861 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDR1P51861 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.55■■□□□ 1.04
CDR1P51861 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CDR1P51861 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDR1P51861 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDR1P51861 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.54■■□□□ 1.04
CDR1P51861 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDR1P51861 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.54■■□□□ 1.04
CDR1P51861 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms